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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96432_cuf2 >transcript:BL96432_cuf2-protein ID=transcript:BL96432_cuf2-protein|Name=transcript:BL96432_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=115bp
VTCNCTEGHEGEQCERCAEFYWGDPVSGTACTECDCSGNTDRCDNVTGAC
IGCQGNTTGFNCDRCADGFYGDAIFGNCSACACDEAGSVNLTCDHISGLC
HCKPGVDTSTRRCSR Run BLAST on NCBI mRNA from alignment at Sc0000019:1962472..1964364- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96432_cuf2 ID=transcript:BL96432_cuf2|Name=transcript:BL96432_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1893bp|location=Sequence derived from alignment at Sc0000019:1962472..1964364- (Branchiostoma lanceolatum)
GTCACGTGCAACTGTACGGAGGGTCATGAGGGGGAACAGTGCGAAAGGTA
ATTGCTTTGTCAAGATGTGTAGTGTGCTGACTTATTACAAACTTTTATGA
GTTGTCAAAGACCTTTTTTGTTCACTTCTTTTGGACAAAAAAAGTAGAGT
ATTTTAGCTTACTTTCTGTATGAACTATCCTTCCTTGGTGTTACTGATAT
CCAAATATCAATGGTGTCATCAGACTAACGACAATGTTTAAAATCATGGC
CGATGAGCTTGTAAACATGAAAACCAGATTTCCTTTTGCCAGGCAAGAGA
AGAACAAGAAACAACTACAACTACAAAGATTGAAACAAACAGTGTTCCTC
CTTAGAACAATTGAAGCGTGAAAAATGGAACCCTGCTTACTCTCTCCCCT
TCTGGTTTCTTGCTGTTCTGGGGACAAACACCTTACAGTGAAGATGCTAG
ATCATGCATTGGAAAACAAATCACCTGACATTATGGTTGCAAATGTAGTC
TTTTTGTTTTAAATGTGTTTCTTTTTCCCATCCAAGATGTGCAGAGTTCT
ACTGGGGGGACCCTGTCAGTGGCACAGCCTGTACTGAATGTGACTGTAGC
GGGAACACCGACCGGTGTGACAACGTCACCGGGGCGTGCATCGGTTGCCA
AGGCAACACCACCGGCTTCAACTGTGACCGCTGTGCAGATGGTTTCTATG
GCGATGCCATATTTGGCAACTGCAGTGGTAAGGACCAAATCGAATGCTTT
TCGTGTTGTCCATGAGTGTTTAACAGCGTGATCTTTCTGCCTGACTTGAC
TAATTTCAGAAGCTGACCAGATATATTTTGTTACCGCATGTGTTTTGCAT
TTTTAATGATTTTATCTTTCCACATTTTACAGCAGTGGTTAGGTGTGATG
TCGTTTGACATTCTTTGCTTATTCAGATTACTTAATTCATATTTTATCAA
ATCTACAAATAACTGGGTTGCCCCATTCAACTTTGACAATGTTTAAAGAG
TATTGTACAGCACTTCTGTCAGTTGTTTTCACAATGAAATTGAATTGAAA
TAAAGAATTGAATATGTTCTCTGCCCCCAGCCTGTGCCTGTGACGAGGCA
GGTTCTGTTAACTTGACCTGTGACCACATCAGCGGGCTGTGCCACTGCAA
ACCTGGGGTGGACACCAGCACTAGAAGGTGGGGCATACTACTCTGTACTG
TACTGATAATGTCTGTATTTTTTACATGTTAAGACATATATATATATATT
TATATATATATACAAACTTTATTTTTGGATGACACATTTGGTTTAGCATC
TGTGTTTATAATGGCTCTTTTTGTGTGTGGATTGGCATTGACCATTGTCT
CACTCTGTGGTCAGGGCGCCTTGTAGCTCTGGTCTGGTCTACTGTAGGAA
GTTTATCAAGAAGAGCAGTCAAATTTTCTTTAGATATCAAGCCTGTATTT
ATGAATTTAAGTATGTAACACAAGCTCTGAAAGCCTGTGAGCCATTTGCT
GAGAATCATGAACATTATGTGCGACTCCCTGCCGCATGATGTAGACTCAG
CAGGCACTGTATGTATGGATGGATATATGTATGTAGGTATGTATGTACTA
GTAATAGTAGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGT
GTATGTGTGTGTGTGTGAGTGTGTATTTGCGTGTATGCGTGTGTCTGTCT
AGGTATGTATGATTGTATGTAGTACTACTTATGTACTAATATGTATGTAC
GTATTTTAAGTGTCTTAATCCTTAAGTAAGAATGGTTAGCTAAAACTAGA
TCAGATCATGGACTTTGTAGTTAAGGCAACATTGCATTGACTTTTGAAAA
AAATTGGGCCGCTATTTTATCTAACTCCACAGATGCTCTCGCT Coding sequence (CDS) from alignment at Sc0000019:1962472..1964364- >transcript:BL96432_cuf2 ID=transcript:BL96432_cuf2|Name=transcript:BL96432_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1380bp|location=Sequence derived from alignment at Sc0000019:1962472..1964364- (Branchiostoma lanceolatum)
GTCACGTGCAACTGTACGGAGGGTCATGAGGGGGAACAGTGCGAAAGATG
TGCAGAGTTCTACTGGGGGGACCCTGTCAGTGGCACAGCCTGTACTGAAT
GTGACTGTAGCGGGAACACCGACCGGTGTGACAACGTCACCGGGGCGTGC
ATCGGTTGCCAAGGCAACACCACCGGCTTCAACTGTGACCGCTGTGCAGA
TGGTTTCTATGGCGATGCCATATTTGGCAACTGCAGTGCCTGTGCCTGTG
ACGAGGCAGGTTCTGTTAACTTGACCTGTGACCACATCAGCGGGCTGTGC
CACTGCAAACCTGGGGTGGACACCAGCACTAGAAGATGCTCTCGCGTCAC
GTGCAACTGTACGGAGGGTCATGAGGGGGAACAGTGCGAAAGATGTGCAG
AGTTCTACTGGGGGGACCCTGTCAGTGGCACAGCCTGTACTGAATGTGAC
TGTAGCGGGAACACCGACCGGTGTGACAACGTCACCGGGGCGTGCATCGG
TTGCCAAGGCAACACCACCGGCTTCAACTGTGACCGCTGTGCAGATGGTT
TCTATGGCGATGCCATATTTGGCAACTGCAGTGCCTGTGCCTGTGACGAG
GCAGGTTCTGTTAACTTGACCTGTGACCACATCAGCGGGCTGTGCCACTG
CAAACCTGGGGTGGACACCAGCACTAGAAGATGCTCTCGCGTCACGTGCA
ACTGTACGGAGGGTCATGAGGGGGAACAGTGCGAAAGATGTGCAGAGTTC
TACTGGGGGGACCCTGTCAGTGGCACAGCCTGTACTGAATGTGACTGTAG
CGGGAACACCGACCGGTGTGACAACGTCACCGGGGCGTGCATCGGTTGCC
AAGGCAACACCACCGGCTTCAACTGTGACCGCTGTGCAGATGGTTTCTAT
GGCGATGCCATATTTGGCAACTGCAGTGCCTGTGCCTGTGACGAGGCAGG
TTCTGTTAACTTGACCTGTGACCACATCAGCGGGCTGTGCCACTGCAAAC
CTGGGGTGGACACCAGCACTAGAAGATGCTCTCGCGTCACGTGCAACTGT
ACGGAGGGTCATGAGGGGGAACAGTGCGAAAGATGTGCAGAGTTCTACTG
GGGGGACCCTGTCAGTGGCACAGCCTGTACTGAATGTGACTGTAGCGGGA
ACACCGACCGGTGTGACAACGTCACCGGGGCGTGCATCGGTTGCCAAGGC
AACACCACCGGCTTCAACTGTGACCGCTGTGCAGATGGTTTCTATGGCGA
TGCCATATTTGGCAACTGCAGTGCCTGTGCCTGTGACGAGGCAGGTTCTG
TTAACTTGACCTGTGACCACATCAGCGGGCTGTGCCACTGCAAACCTGGG
GTGGACACCAGCACTAGAAGATGCTCTCGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000019 | genome | Sc0000019:1962472..1964364 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96432_cuf2 |
| Biotype | protein_coding |
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