|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96425_cuf10 >transcript:BL96425_cuf10-protein ID=transcript:BL96425_cuf10-protein|Name=transcript:BL96425_cuf10|organism=Branchiostoma lanceolatum|type=polypeptide|length=141bp
MPGRWGLFLGLLACFLTQGRAALPPGCMVLEDQTFSTADVSGIFGVNRIL
ATEAPPQRVGTLRDQGPLPTGHFATNQIKPHTAPMRLFPYSAVLSREGIT
YDAYTLDRWNATVRSDEMMQQTPSRQGAPWDKVVSVGTNMN Run BLAST on NCBI mRNA from alignment at Sc0000019:2570914..2573706- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96425_cuf10 ID=transcript:BL96425_cuf10|Name=transcript:BL96425_cuf10|organism=Branchiostoma lanceolatum|type=mRNA|length=2793bp|location=Sequence derived from alignment at Sc0000019:2570914..2573706- (Branchiostoma lanceolatum)
GACATGTTGTCCTATAAACCGTTTTCTACCATACTTTGCTAACTAGAAGC
ATTCAAGTCGCTTCTCCCATTTCCCTACAGGTACGCACAACCATGCCGGG
TCGTTGGGGATTATTCCTCGGGCTGCTAGCGTGCTTCCTCACGCAGGGCC
GCGCGGCGCTGCCCCCTGGCTGCATGGTCCTGGAGGACCAAACGTTCTCC
ACCGCCGACGTGTCGGGAATCTTCGGGGTGAACCGGATCCTGGCGACCGA
GGCGCCTCCCCAGCGCGTCGGGACCCTGCGCGACCAGGGCCCGCTGCCCA
CCGGGCACTTCGCCACCAACCAGATCAAGCCGCACACCGCGCCCATGCGG
CTCTTCCCGTACTCCGGTAGGCACTGTGGTAGAAATAAAAAATTACTAAA
TAAAATTATCTTTTAGTTGCAAATTCATGCCCGTAGGCTAATTGCAAGGG
TACAAACGCTAGAAAGGGTAACAATGGTAACAAGTGTCTATTCTATGCAT
CTAACTAATATTTCTACATACACCTATACTAAGGGTCCCGGGTTGACTTC
TTCTTTGGAGGCAGTGGCTGATGAAAAGTCGCACATTTTTATTGATAAGT
GGGTTTTTTGATTTTAGTAGAAATGTTTTTTTTTAGGTCTTCTAGATGGC
GAAAGCTTGGAAATATTGTTTTGGTTGTCGAAAAGCTTAAGCTTGTTTCT
TTCATCCTCCCTCATAATGAGGGCAGTTACAACTGAAAGGTATTTTATCT
TCCACTGTATCCATTGCACAATATTTACACAGTTCTCTCCTGAACTGACA
GCTTTTTATTAACGCAAAAATGCAACAACTTCAAAATAGAGATCCGGAGA
TTAATTTTGAAATTCTTAATACTAGACACCCGGACAGGGCAAAATTTTGG
GTTATAAAACAGGCTTCTACTTGTATCACACGGGCTTCGAGTGCACACTT
GGAGTGCACAGCGCCCATGAAGCTCTTCCCCTACTCCGGTAAGCGTTTTG
AATAATGATAACTTTAACACCAGGTACATAATTCATCCACCCTGAAAAGA
TACGTCGAAACACATCTCCAACCCAACGTCCCCCAGTATAATGCACTCCT
GTACATCTAAACTGTGCATACCTGGGGGTGCTGCACTAGAGATCTCTCAA
ACCCACTGTTTAACAACTTGAGTAGTCCGACGTTTTTATGTAACCCGGCG
GACTGGTGTTGATAGAGTTTACCTTTCTAAATCGTTTTCTACTTGAGCTA
TTTGAAGGGTTTGGCTTTTTTTCCTCATGCAATAGAAATGAGTTGCCTAA
CGGTTTGTCCAACGGTTTGGTTGGTGCCACTAGACCATACTTTTACCAAT
TCCTTGAAGGTAAACATTACGAAACGTCGCATGTGACGACAAGTAGCCGT
ATCAGTCACTGCAGGCCATTTTAGGTTTACTTTAAACAAGATGATAGCGC
CTTTGCACGTGACGTCATAAGTGTGACGTCATAAGTGTGAAGTACAAAGA
GAAGCCGCATTGTCGGAACCCGAGACAATGATTCATGTGTCGGGTGCTCT
TTAAACTGACCGTGACAAACTCAGTTAAGTTGATATATATGAAAACCAAC
TGTTTAGAACATTCCTTACTTGAACATCACTTAAACACACCAACATGGCG
GTCGCTAAACACATCATAGTCAAGTCACTGTGAATAAACTATTGCTATTT
CATGATCAGTAGCTTGCTCCTGCACTAGAACATACTCCCAACCCACCCAT
TTGTTTTTCATTGACAGCGTTTCAGACATTTTTAATGCTCAAAGAACTGC
AACTGAAAAGACAGGTGTAGGGAATACAAGTTCACGAATTTTTACTAGGA
ATTCTGCCGTATGACCTCAATACCACACAAGTGCCTAGGTTCGGCCAGCT
TATATTTTATTAGTGTTTGGTTCAGTTCTACATAACTGCTTATGTACAGT
CATCCTGCCTGCAAGTTTCATGCCCCTAAACTTGTCGTCCCGCCAGCCGG
AAGTGCATCACGTAAGACGCGTACACGTATATTTTGTATTTAGGTTCATA
AATTGCTAAGCAATCAAACATCATTTCCCTCTTTGCTCTTAACTATTGTT
TTACCAATTAAAATGACTTGAATGTAAACATTACGAAACGTCGCATCCGA
CAAGTTACCGCATCAGTCATTGCACCCCATTTTAGGTTTGAACAAGATGA
TAGCACCTTTGCACGTGACGTCATAACATGTGAAATACAAAAGGCAGCCT
TCATGTTGAGGTGAGCAGACGTATGTTAAGGTTAGGGGATGTCGGAACAT
AACAGTGTCTGAATATAGGTGCGTCGGAACATAGAGGTGTCGAAATATTA
TTCTCCAAGCAGAGGCTTCCATCGAGAGGGGTAGTTTTGTCCGGGATTTC
TAACGTCCCTCTCCTCTTTTAAAAATCCCGGACAAAACTACCCCTCTCGA
TCGAAGCCTCTGCTTGTAGAATATCGAAATATAGGGTTGTAACCGTTGTT
GTTCTCACTTCCCGCCAGCCGTCCTGTCCCGGGAGGGCATCACGTACGAC
GCCTACACGTTGGACCGGTGGAACGCCACCGTGCGGTCGGACGAGATGAT
GCAGCAGACGCCGAGTCGCCAGGGGGCGCCCTGGGACAAGGTGGTCAGCG
TGGGCACCAACATGAAGCAGATGGTGTCCGGGCCCGACGGCGCGCCCAAG
GCGGCATTCACAGGTAGGTAGCCTGTGTTTACACAATCTCTCGCCAGGGG
GCGCCCTGGGACAAGGTGGTGAGCGTGGGCACCAACATGAACC Coding sequence (CDS) from alignment at Sc0000019:2570914..2573706- >transcript:BL96425_cuf10 ID=transcript:BL96425_cuf10|Name=transcript:BL96425_cuf10|organism=Branchiostoma lanceolatum|type=CDS|length=1269bp|location=Sequence derived from alignment at Sc0000019:2570914..2573706- (Branchiostoma lanceolatum)
ATGCCGGGTCGTTGGGGATTATTCCTCGGGCTGCTAGCGTGCTTCCTCAC
GCAGGGCCGCGCGGCGCTGCCCCCTGGCTGCATGGTCCTGGAGGACCAAA
CGTTCTCCACCGCCGACGTGTCGGGAATCTTCGGGGTGAACCGGATCCTG
GCGACCGAGGCGCCTCCCCAGCGCGTCGGGACCCTGCGCGACCAGGGCCC
GCTGCCCACCGGGCACTTCGCCACCAACCAGATCAAGCCGCACACCGCGC
CCATGCGGCTCTTCCCGTACTCCGCCGTCCTGTCCCGGGAGGGCATCACG
TACGACGCCTACACGTTGGACCGGTGGAACGCCACCGTGCGGTCGGACGA
GATGATGCAGCAGACGCCGAGTCGCCAGGGGGCGCCCTGGGACAAGGTGG
TGAGCGTGGGCACCAACATGAACATGCCGGGTCGTTGGGGATTATTCCTC
GGGCTGCTAGCGTGCTTCCTCACGCAGGGCCGCGCGGCGCTGCCCCCTGG
CTGCATGGTCCTGGAGGACCAAACGTTCTCCACCGCCGACGTGTCGGGAA
TCTTCGGGGTGAACCGGATCCTGGCGACCGAGGCGCCTCCCCAGCGCGTC
GGGACCCTGCGCGACCAGGGCCCGCTGCCCACCGGGCACTTCGCCACCAA
CCAGATCAAGCCGCACACCGCGCCCATGCGGCTCTTCCCGTACTCCGCCG
TCCTGTCCCGGGAGGGCATCACGTACGACGCCTACACGTTGGACCGGTGG
AACGCCACCGTGCGGTCGGACGAGATGATGCAGCAGACGCCGAGTCGCCA
GGGGGCGCCCTGGGACAAGGTGGTGAGCGTGGGCACCAACATGAACATGC
CGGGTCGTTGGGGATTATTCCTCGGGCTGCTAGCGTGCTTCCTCACGCAG
GGCCGCGCGGCGCTGCCCCCTGGCTGCATGGTCCTGGAGGACCAAACGTT
CTCCACCGCCGACGTGTCGGGAATCTTCGGGGTGAACCGGATCCTGGCGA
CCGAGGCGCCTCCCCAGCGCGTCGGGACCCTGCGCGACCAGGGCCCGCTG
CCCACCGGGCACTTCGCCACCAACCAGATCAAGCCGCACACCGCGCCCAT
GCGGCTCTTCCCGTACTCCGCCGTCCTGTCCCGGGAGGGCATCACGTACG
ACGCCTACACGTTGGACCGGTGGAACGCCACCGTGCGGTCGGACGAGATG
ATGCAGCAGACGCCGAGTCGCCAGGGGGCGCCCTGGGACAAGGTGGTGAG
CGTGGGCACCAACATGAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000019 | genome | Sc0000019:2570914..2573706 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96425_cuf10 |
| Biotype | protein_coding |
|
