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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96421_cuf9 >transcript:BL96421_cuf9-protein ID=transcript:BL96421_cuf9-protein|Name=transcript:BL96421_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=183bp
SLDAAFAQNGPGGAFGYSITTSLQSQALLRVSVQSCSTECPYSDRPQYVG
VLSSLDYLKGAFNVIVGNNDYYQEQQWRDEWMDFDRDCRAQPSSIDTCTD
TCPCPGGATGMPHPTNESFCMCPCDCPRGNISFTHPDIPGDGCNCDVCPD
GDFKTVSSQGHLHCPCLCPDNSTSELTSTGKCD Run BLAST on NCBI mRNA from alignment at Sc0000343:92809..93926+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96421_cuf9 ID=transcript:BL96421_cuf9|Name=transcript:BL96421_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=1118bp|location=Sequence derived from alignment at Sc0000343:92809..93926+ (Branchiostoma lanceolatum)
CTCTCTTGATGCGGCATTCGGTAAGCCGGCCGCGCTTTCTAACAAGTACT
TTCGAGTCTAGTCAATCTTAAAGAATGATAATGAATCATATGGGTACCGA
CACCTTCTCTGTATAAGTAAATGCCAACAGAATCAGTCTTCTTTCAATAT
TGAATTTTTTTCTTCAAAATCGTCTGTCTCATTTTCCAGCTCAGAATGGT
CCAGGCGGCGCTTTTGGGTACAGTATCACCACATCCCTTCAATCACAAGC
ACTCCTCCGTGTGTCAGTCCAGTCGTGTTCTACTGAGTGTCCGTATTCAG
ACAGACCACAGTACGTTGGCGTCTTATCATCGTTGGATTATCTGAAAGGA
GCATTCAACGTAATAGTTGGAAACAACGATTACTATCAGGAACAACAATG
GAGAGATGAGTGGATGGACTTTGATAGGTGAGGAATCATATCTTACTGCC
AGATTCTTTGACACCAACTGCCTAGAGTGGATACATGGTATGTTGAAACT
GTAAATACGTTTCTGAACAACGACAGTGTTTGACAATTGACATTCGTTGA
ACGGATAGGATCTAGGAGGGCCTAAGACTTTTTATCCTTTTAGACCTACA
GACCAGAGACTGCTACATATAATACTTTCCGAGAAATGTCATGTTAAGCC
GATATTCCTCTACGTTTCAGAGATTGCAGAGCACAGCCATCAAGTATTGA
TACCTGTACGGACACATGTCCGTGCCCTGGTGGAGCAACAGGGATGCCAC
ACCCTACTAACGAGAGTTTCTGTATGTGCCCTTGTGACTGTCCAAGAGGA
AACATAAGCTTTACGGTATGAATAACTTTCCTTATTTGTGATGTTTCTCC
GATACGTACGTATACCAATGATAGTCCATTTCAAAAACTCCATTTATACA
TCATTTCTTGATGTCAGCCACATTAGACTTTTAGGAAAAGATGCATTACA
CAGTTCCTATTATTCACAGCACCCAGACATTCCTGGTGACGGATGTAACT
GCGATGTCTGCCCTGATGGAGACTTCAAAACGGTCAGCAGCCAGGGACAT
CTACACTGCCCATGTCTGTGTCCTGACAACAGCACATCGGAACTGACTAG
CACTGGGAAATGTGACGT Coding sequence (CDS) from alignment at Sc0000343:92809..93926+ >transcript:BL96421_cuf9 ID=transcript:BL96421_cuf9|Name=transcript:BL96421_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=2196bp|location=Sequence derived from alignment at Sc0000343:92809..93926+ (Branchiostoma lanceolatum)
TCTCTTGATGCGGCATTCGCTCAGAATGGTCCAGGCGGCGCTTTTGGGTA
CAGTATCACCACATCCCTTCAATCACAAGCACTCCTCCGTGTGTCAGTCC
AGTCGTGTTCTACTGAGTGTCCGTATTCAGACAGACCACAGTACGTTGGC
GTCTTATCATCGTTGGATTATCTGAAAGGAGCATTCAACGTAATAGTTGG
AAACAACGATTACTATCAGGAACAACAATGGAGAGATGAGTGGATGGACT
TTGATAGAGATTGCAGAGCACAGCCATCAAGTATTGATACCTGTACGGAC
ACATGTCCGTGCCCTGGTGGAGCAACAGGGATGCCACACCCTACTAACGA
GAGTTTCTGTATGTGCCCTTGTGACTGTCCAAGAGGAAACATAAGCTTTA
CGCACCCAGACATTCCTGGTGACGGATGTAACTGCGATGTCTGCCCTGAT
GGAGACTTCAAAACGGTCAGCAGCCAGGGACATCTACACTGCCCATGTCT
GTGTCCTGACAACAGCACATCGGAACTGACTAGCACTGGGAAATGTGACT
CTCTTGATGCGGCATTCGCTCAGAATGGTCCAGGCGGCGCTTTTGGGTAC
AGTATCACCACATCCCTTCAATCACAAGCACTCCTCCGTGTGTCAGTCCA
GTCGTGTTCTACTGAGTGTCCGTATTCAGACAGACCACAGTACGTTGGCG
TCTTATCATCGTTGGATTATCTGAAAGGAGCATTCAACGTAATAGTTGGA
AACAACGATTACTATCAGGAACAACAATGGAGAGATGAGTGGATGGACTT
TGATAGAGATTGCAGAGCACAGCCATCAAGTATTGATACCTGTACGGACA
CATGTCCGTGCCCTGGTGGAGCAACAGGGATGCCACACCCTACTAACGAG
AGTTTCTGTATGTGCCCTTGTGACTGTCCAAGAGGAAACATAAGCTTTAC
GCACCCAGACATTCCTGGTGACGGATGTAACTGCGATGTCTGCCCTGATG
GAGACTTCAAAACGGTCAGCAGCCAGGGACATCTACACTGCCCATGTCTG
TGTCCTGACAACAGCACATCGGAACTGACTAGCACTGGGAAATGTGACTC
TCTTGATGCGGCATTCGCTCAGAATGGTCCAGGCGGCGCTTTTGGGTACA
GTATCACCACATCCCTTCAATCACAAGCACTCCTCCGTGTGTCAGTCCAG
TCGTGTTCTACTGAGTGTCCGTATTCAGACAGACCACAGTACGTTGGCGT
CTTATCATCGTTGGATTATCTGAAAGGAGCATTCAACGTAATAGTTGGAA
ACAACGATTACTATCAGGAACAACAATGGAGAGATGAGTGGATGGACTTT
GATAGAGATTGCAGAGCACAGCCATCAAGTATTGATACCTGTACGGACAC
ATGTCCGTGCCCTGGTGGAGCAACAGGGATGCCACACCCTACTAACGAGA
GTTTCTGTATGTGCCCTTGTGACTGTCCAAGAGGAAACATAAGCTTTACG
CACCCAGACATTCCTGGTGACGGATGTAACTGCGATGTCTGCCCTGATGG
AGACTTCAAAACGGTCAGCAGCCAGGGACATCTACACTGCCCATGTCTGT
GTCCTGACAACAGCACATCGGAACTGACTAGCACTGGGAAATGTGACTCT
CTTGATGCGGCATTCGCTCAGAATGGTCCAGGCGGCGCTTTTGGGTACAG
TATCACCACATCCCTTCAATCACAAGCACTCCTCCGTGTGTCAGTCCAGT
CGTGTTCTACTGAGTGTCCGTATTCAGACAGACCACAGTACGTTGGCGTC
TTATCATCGTTGGATTATCTGAAAGGAGCATTCAACGTAATAGTTGGAAA
CAACGATTACTATCAGGAACAACAATGGAGAGATGAGTGGATGGACTTTG
ATAGAGATTGCAGAGCACAGCCATCAAGTATTGATACCTGTACGGACACA
TGTCCGTGCCCTGGTGGAGCAACAGGGATGCCACACCCTACTAACGAGAG
TTTCTGTATGTGCCCTTGTGACTGTCCAAGAGGAAACATAAGCTTTACGC
ACCCAGACATTCCTGGTGACGGATGTAACTGCGATGTCTGCCCTGATGGA
GACTTCAAAACGGTCAGCAGCCAGGGACATCTACACTGCCCATGTCTGTG
TCCTGACAACAGCACATCGGAACTGACTAGCACTGGGAAATGTGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000343 | genome | Sc0000343:92809..93926 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96421_cuf9 |
| Biotype | protein_coding |
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