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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96398_cuf81 >transcript:BL96398_cuf81-protein ID=transcript:BL96398_cuf81-protein|Name=transcript:BL96398_cuf81|organism=Branchiostoma lanceolatum|type=polypeptide|length=367bp
ETTRSSVSLEWQKPEFDGGSRVIGYVVEQRRTDSDEWSRSHTKSMVRHED
LIATDVEEGKGYYFRVSAANECGVSAPATVEGIVTAKDMMEAPTLELDIS
LRRAIVVRGGAPIRIYIPIRGKPFPNITWEKEDSNLENRAAIETSEIATQ
LMIPSSDRRDAGYFNLTLENSSGTATAQILVKVLDTPGPPTNVRVRDVTK
GTAIIQWGAPEKDGGKAVTNYLLQKREISRKTWDTVETRIYKTSYRVTNL
VEGNQYYFQILAENVYGIGVPQASDEAILAMDPVDSPDPPRKLEITEITK
TTVSLAWQRPENDGGSRITSYIVEMLPAGAEEWVRCSALSSLRYTVTELT
TGQEYQFRVSAQNVGAV Run BLAST on NCBI mRNA from alignment at Sc0000008:5679713..5681958+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96398_cuf81 ID=transcript:BL96398_cuf81|Name=transcript:BL96398_cuf81|organism=Branchiostoma lanceolatum|type=mRNA|length=2246bp|location=Sequence derived from alignment at Sc0000008:5679713..5681958+ (Branchiostoma lanceolatum)
GAGACGACGCGCTCGTCCGTGTCGCTGGAGTGGCAGAAGCCTGAGTTCGA
CGGCGGCAGCCGAGTCATCGGTTACGTCGTTGAGCAACGCAGGGTGGGTG
TTCACGCTTCACTTTTAGACCTATTTCATAATAAGTACATTTTGTAAGGG
CTCCCTTGGAAATCAGTTACTCAGTTAAGTGAAAGAACCACCCTAAAGAT
TGATGAATAGGTAAATAAATAATAAATGAATAAATAAATAAATAAATAAA
TAGGAAATTGTTTCAGCTTTTAGTTCTCTTTGATTTATATTTCCACTATT
TTCCTATTTTCTGTATTCATTTGGAAGTTATAACTGTAGGGAAAATGGTC
TGCCGTATCAAGTTCGATATAACAATTTCCTGTATGTATTCAAATTGATG
TTCCTTTACCTAAAATTGCTCAATCTACTCCTTCAGACCGACTCCGATGA
GTGGTCCAGGAGCCACACCAAGAGCATGGTACGTCATGAGGACCTCATCG
CCACAGACGTGGAGGAAGGAAAAGGCTACTACTTCCGGGTCAGCGCCGCC
AACGAGTGTGGCGTAAGCGCGCCGGCAACCGTGGAGGGCATCGTCACCGC
TAAGGACATGATGGAGGCACCTACGCTGGAGCTGGATATCAGCCTGCGAC
GCGCCATCGTGGTGCGAGGGGGCGCTCCTATCCGCATCTACATCCCCATC
AGGGGCAAGCCGTTCCCCAACATCACCTGGGAGAAGGAGGACAGCAACCT
GGAGAACCGCGCCGCCATCGAGACGAGCGAGATCGCCACGCAGCTGATGA
TCCCGTCCTCGGACCGCCGCGACGCCGGCTACTTCAACCTCACCCTGGAG
AACTCCAGCGGAACTGCAACTGCGCAGATACTCGTCAAAGTGCTTGGTAC
GTCCGACAACGTTTTGTAGCTGTCTTGATCCTTATAGAAATGCTTGGTAT
TCGTGATACTAATTCAAATGGATGTGCCCAAAAATTGCAGTCACCGACCC
TTGTCATAGTACATCTGATACTGATGCAGTACTTGAATTCAAATTGGGTG
AAATATATCAGAATTCTGAACAGTAAATTGTAGTCTTGGGGTAGTCTTAT
CTTAAAACCATACAAGAGATAGGTCTAAGATCACTTGGCACCTTAACAGG
GCCAAAATTCCTCAATGAATTTTGATCTAGAAGAATGGTTGTTAGTGTGT
AGAATTGGTTGCCAAAATGTTAGGCTTATCGTGACGTCTTCTTTGTTGCC
ATAGACACGCCCGGACCGCCCACCAACGTCCGCGTGCGTGACGTCACCAA
GGGAACCGCCATCATCCAATGGGGCGCCCCCGAGAAGGATGGCGGGAAGG
CCGTGACGAACTACTTGCTGCAGAAGCGCGAGATCAGCCGCAAGACGTGG
GACACGGTCGAGACTCGCATCTACAAGACGTCTTACCGCGTCACCAACCT
GGTGGAAGGAAACCAGTACTACTTCCAGATCCTGGCCGAGAACGTGTATG
GTATCGGAGTGCCGCAGGCTTCTGACGAAGCCATCCTGGCTATGGACCCA
GTCGGTAAGACAGTCCTAAAAATATGACAGATTTAGTACTAGTATTTACC
CATAGATATTTATACTAGACTCGCTCTAATACACTTTCAAGTCTGTGCTT
TTGATCATCATAATGAAACCTGTAGATCCTCCAACAGTGATATTGTGGAT
GCTGGAACAAATGTAAATTACTGCTCTGTGGTCCCAGTCAGTAAGATATT
CATCAGAAAAAGTTACAATAATATATTTACACCTTAGATACTCATACCAA
ATTTTGCTAGAATTAGATACTCATACCAAATTTTGCTAGAATTAACTTTC
AAGTCAGTTCTTTCAAGTGCCATACATATAGTTTTGTTAGAGATTATATC
CGCACCCTGGCACTTGTCTTCTTGAAGGTTAAACATTCTTCATGAAAGTT
AAGACGGGGAGGCTAACATCTTATACACCTTCTTTTCTCATCTTAGACTC
TCCGGACCCACCGAGGAAGCTGGAGATCACCGAGATCACCAAGACAACCG
TCTCCCTGGCCTGGCAGCGTCCCGAGAACGATGGCGGCAGCCGCATCACC
AGCTACATCGTGGAGATGCTTCCGGCCGGCGCGGAGGAGTGGGTGCGCTG
CTCGGCGCTGAGCTCGCTGCGCTACACCGTGACCGAGCTGACCACGGGGC
AGGAGTACCAGTTCCGCGTGTCCGCCCAGAACGTCGGCGCCGTCAG Coding sequence (CDS) from alignment at Sc0000008:5679713..5681958+ >transcript:BL96398_cuf81 ID=transcript:BL96398_cuf81|Name=transcript:BL96398_cuf81|organism=Branchiostoma lanceolatum|type=CDS|length=4404bp|location=Sequence derived from alignment at Sc0000008:5679713..5681958+ (Branchiostoma lanceolatum)
GAGACGACGCGCTCGTCCGTGTCGCTGGAGTGGCAGAAGCCTGAGTTCGA
CGGCGGCAGCCGAGTCATCGGTTACGTCGTTGAGCAACGCAGGACCGACT
CCGATGAGTGGTCCAGGAGCCACACCAAGAGCATGGTACGTCATGAGGAC
CTCATCGCCACAGACGTGGAGGAAGGAAAAGGCTACTACTTCCGGGTCAG
CGCCGCCAACGAGTGTGGCGTAAGCGCGCCGGCAACCGTGGAGGGCATCG
TCACCGCTAAGGACATGATGGAGGCACCTACGCTGGAGCTGGATATCAGC
CTGCGACGCGCCATCGTGGTGCGAGGGGGCGCTCCTATCCGCATCTACAT
CCCCATCAGGGGCAAGCCGTTCCCCAACATCACCTGGGAGAAGGAGGACA
GCAACCTGGAGAACCGCGCCGCCATCGAGACGAGCGAGATCGCCACGCAG
CTGATGATCCCGTCCTCGGACCGCCGCGACGCCGGCTACTTCAACCTCAC
CCTGGAGAACTCCAGCGGAACTGCAACTGCGCAGATACTCGTCAAAGTGC
TTGACACGCCCGGACCGCCCACCAACGTCCGCGTGCGTGACGTCACCAAG
GGAACCGCCATCATCCAATGGGGCGCCCCCGAGAAGGATGGCGGGAAGGC
CGTGACGAACTACTTGCTGCAGAAGCGCGAGATCAGCCGCAAGACGTGGG
ACACGGTCGAGACTCGCATCTACAAGACGTCTTACCGCGTCACCAACCTG
GTGGAAGGAAACCAGTACTACTTCCAGATCCTGGCCGAGAACGTGTATGG
TATCGGAGTGCCGCAGGCTTCTGACGAAGCCATCCTGGCTATGGACCCAG
TCGACTCTCCGGACCCACCGAGGAAGCTGGAGATCACCGAGATCACCAAG
ACAACCGTCTCCCTGGCCTGGCAGCGTCCCGAGAACGATGGCGGCAGCCG
CATCACCAGCTACATCGTGGAGATGCTTCCGGCCGGCGCGGAGGAGTGGG
TGCGCTGCTCGGCGCTGAGCTCGCTGCGCTACACCGTGACCGAGCTGACC
ACGGGGCAGGAGTACCAGTTCCGCGTGTCCGCCCAGAACGTCGGCGCCGT
CGAGACGACGCGCTCGTCCGTGTCGCTGGAGTGGCAGAAGCCTGAGTTCG
ACGGCGGCAGCCGAGTCATCGGTTACGTCGTTGAGCAACGCAGGACCGAC
TCCGATGAGTGGTCCAGGAGCCACACCAAGAGCATGGTACGTCATGAGGA
CCTCATCGCCACAGACGTGGAGGAAGGAAAAGGCTACTACTTCCGGGTCA
GCGCCGCCAACGAGTGTGGCGTAAGCGCGCCGGCAACCGTGGAGGGCATC
GTCACCGCTAAGGACATGATGGAGGCACCTACGCTGGAGCTGGATATCAG
CCTGCGACGCGCCATCGTGGTGCGAGGGGGCGCTCCTATCCGCATCTACA
TCCCCATCAGGGGCAAGCCGTTCCCCAACATCACCTGGGAGAAGGAGGAC
AGCAACCTGGAGAACCGCGCCGCCATCGAGACGAGCGAGATCGCCACGCA
GCTGATGATCCCGTCCTCGGACCGCCGCGACGCCGGCTACTTCAACCTCA
CCCTGGAGAACTCCAGCGGAACTGCAACTGCGCAGATACTCGTCAAAGTG
CTTGACACGCCCGGACCGCCCACCAACGTCCGCGTGCGTGACGTCACCAA
GGGAACCGCCATCATCCAATGGGGCGCCCCCGAGAAGGATGGCGGGAAGG
CCGTGACGAACTACTTGCTGCAGAAGCGCGAGATCAGCCGCAAGACGTGG
GACACGGTCGAGACTCGCATCTACAAGACGTCTTACCGCGTCACCAACCT
GGTGGAAGGAAACCAGTACTACTTCCAGATCCTGGCCGAGAACGTGTATG
GTATCGGAGTGCCGCAGGCTTCTGACGAAGCCATCCTGGCTATGGACCCA
GTCGACTCTCCGGACCCACCGAGGAAGCTGGAGATCACCGAGATCACCAA
GACAACCGTCTCCCTGGCCTGGCAGCGTCCCGAGAACGATGGCGGCAGCC
GCATCACCAGCTACATCGTGGAGATGCTTCCGGCCGGCGCGGAGGAGTGG
GTGCGCTGCTCGGCGCTGAGCTCGCTGCGCTACACCGTGACCGAGCTGAC
CACGGGGCAGGAGTACCAGTTCCGCGTGTCCGCCCAGAACGTCGGCGCCG
TCGAGACGACGCGCTCGTCCGTGTCGCTGGAGTGGCAGAAGCCTGAGTTC
GACGGCGGCAGCCGAGTCATCGGTTACGTCGTTGAGCAACGCAGGACCGA
CTCCGATGAGTGGTCCAGGAGCCACACCAAGAGCATGGTACGTCATGAGG
ACCTCATCGCCACAGACGTGGAGGAAGGAAAAGGCTACTACTTCCGGGTC
AGCGCCGCCAACGAGTGTGGCGTAAGCGCGCCGGCAACCGTGGAGGGCAT
CGTCACCGCTAAGGACATGATGGAGGCACCTACGCTGGAGCTGGATATCA
GCCTGCGACGCGCCATCGTGGTGCGAGGGGGCGCTCCTATCCGCATCTAC
ATCCCCATCAGGGGCAAGCCGTTCCCCAACATCACCTGGGAGAAGGAGGA
CAGCAACCTGGAGAACCGCGCCGCCATCGAGACGAGCGAGATCGCCACGC
AGCTGATGATCCCGTCCTCGGACCGCCGCGACGCCGGCTACTTCAACCTC
ACCCTGGAGAACTCCAGCGGAACTGCAACTGCGCAGATACTCGTCAAAGT
GCTTGACACGCCCGGACCGCCCACCAACGTCCGCGTGCGTGACGTCACCA
AGGGAACCGCCATCATCCAATGGGGCGCCCCCGAGAAGGATGGCGGGAAG
GCCGTGACGAACTACTTGCTGCAGAAGCGCGAGATCAGCCGCAAGACGTG
GGACACGGTCGAGACTCGCATCTACAAGACGTCTTACCGCGTCACCAACC
TGGTGGAAGGAAACCAGTACTACTTCCAGATCCTGGCCGAGAACGTGTAT
GGTATCGGAGTGCCGCAGGCTTCTGACGAAGCCATCCTGGCTATGGACCC
AGTCGACTCTCCGGACCCACCGAGGAAGCTGGAGATCACCGAGATCACCA
AGACAACCGTCTCCCTGGCCTGGCAGCGTCCCGAGAACGATGGCGGCAGC
CGCATCACCAGCTACATCGTGGAGATGCTTCCGGCCGGCGCGGAGGAGTG
GGTGCGCTGCTCGGCGCTGAGCTCGCTGCGCTACACCGTGACCGAGCTGA
CCACGGGGCAGGAGTACCAGTTCCGCGTGTCCGCCCAGAACGTCGGCGCC
GTCGAGACGACGCGCTCGTCCGTGTCGCTGGAGTGGCAGAAGCCTGAGTT
CGACGGCGGCAGCCGAGTCATCGGTTACGTCGTTGAGCAACGCAGGACCG
ACTCCGATGAGTGGTCCAGGAGCCACACCAAGAGCATGGTACGTCATGAG
GACCTCATCGCCACAGACGTGGAGGAAGGAAAAGGCTACTACTTCCGGGT
CAGCGCCGCCAACGAGTGTGGCGTAAGCGCGCCGGCAACCGTGGAGGGCA
TCGTCACCGCTAAGGACATGATGGAGGCACCTACGCTGGAGCTGGATATC
AGCCTGCGACGCGCCATCGTGGTGCGAGGGGGCGCTCCTATCCGCATCTA
CATCCCCATCAGGGGCAAGCCGTTCCCCAACATCACCTGGGAGAAGGAGG
ACAGCAACCTGGAGAACCGCGCCGCCATCGAGACGAGCGAGATCGCCACG
CAGCTGATGATCCCGTCCTCGGACCGCCGCGACGCCGGCTACTTCAACCT
CACCCTGGAGAACTCCAGCGGAACTGCAACTGCGCAGATACTCGTCAAAG
TGCTTGACACGCCCGGACCGCCCACCAACGTCCGCGTGCGTGACGTCACC
AAGGGAACCGCCATCATCCAATGGGGCGCCCCCGAGAAGGATGGCGGGAA
GGCCGTGACGAACTACTTGCTGCAGAAGCGCGAGATCAGCCGCAAGACGT
GGGACACGGTCGAGACTCGCATCTACAAGACGTCTTACCGCGTCACCAAC
CTGGTGGAAGGAAACCAGTACTACTTCCAGATCCTGGCCGAGAACGTGTA
TGGTATCGGAGTGCCGCAGGCTTCTGACGAAGCCATCCTGGCTATGGACC
CAGTCGACTCTCCGGACCCACCGAGGAAGCTGGAGATCACCGAGATCACC
AAGACAACCGTCTCCCTGGCCTGGCAGCGTCCCGAGAACGATGGCGGCAG
CCGCATCACCAGCTACATCGTGGAGATGCTTCCGGCCGGCGCGGAGGAGT
GGGTGCGCTGCTCGGCGCTGAGCTCGCTGCGCTACACCGTGACCGAGCTG
ACCACGGGGCAGGAGTACCAGTTCCGCGTGTCCGCCCAGAACGTCGGCGC
CGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:5679713..5681958 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96398_cuf81 |
| Biotype | protein_coding |
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