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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96392_cuf71 >transcript:BL96392_cuf71-protein ID=transcript:BL96392_cuf71-protein|Name=transcript:BL96392_cuf71|organism=Branchiostoma lanceolatum|type=polypeptide|length=200bp
YMVERKEKNSPRWIKATKMPISDNEFTSMGLMEGLQYMHRVRAVNQAGTG
PACDPTPLVIAMDPIAPPRNLEILEVSSKFVHVQWKKPIYDGGARITGYV
IEARDVRSEKWVKCHLGEVLKLEHVITDIKALQKYQFRVKAKNEAGNISE
PSNLAGPVLTKDDLQPPTITLDVKIKDNKVQVHAGDKLVISGHLGGKPVP Run BLAST on NCBI mRNA from alignment at Sc0000008:5580279..5581889+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96392_cuf71 ID=transcript:BL96392_cuf71|Name=transcript:BL96392_cuf71|organism=Branchiostoma lanceolatum|type=mRNA|length=1611bp|location=Sequence derived from alignment at Sc0000008:5580279..5581889+ (Branchiostoma lanceolatum)
CTACATGGTCGAACGGAAGGAGAAGAACTCCCCCCGCTGGATCAAGGCCA
CCAAAATGCCCATCTCAGACAACGAGTTTACCTCTATGGGTACGTCATTA
AAGCCATTTACACAACGTTTTGCAATGTGATATGTACATACATGTATAGC
AAAGATTGTGATATAACAAATACATGAAAAGAAATTCTTTATGTTCCGAT
TTTTTCGCCATTTGACCACTAAGATGCCCATCTCAGACACCAATTACCAA
TATGTAAGTTTACCAATATAAGTGCGTTGCTAGAGTCTTAGAAATCTTCT
AAGAAATTCGTTATCTAATATTGCAACCACATGTAAATAGGGATCGTAAG
GATATATTCACCTCATGTAATCACCCAGTGTTGCAAGGTTCAACCATAGA
CGCATAACAAAAGTCTTGAATATATGAATACATGAAATAAACTTTCAGTT
GTTTTGATCATCGACAATTGTCTATTGCAGGTCTGATGGAAGGGCTGCAG
TACATGCACCGCGTGCGCGCCGTGAACCAGGCCGGCACCGGGCCCGCCTG
CGACCCGACCCCGCTGGTCATCGCCATGGACCCGATCGCCCCGCCGCGCA
ACCTCGAGATCCTCGAGGTCAGTATCTGTAGCTATATAGCCGGTATAACC
GCCATTTCTGCTGTACATGGTGGTAACGAGTTCCACCCTACGATTGATCT
AAAATACAAAATTTTGAACGCATGAATCCTTGGTTGGTAACTCTGGAACT
TGAAGGCATGACTGTTTCTTGATCACTTTTGAGCTGGTACTAAATATTTA
GTCAGTATGTCCACCAGTTTATTAGTCATTGTGTACATCATGCTAAGTCT
GGCCATTTTCCTTCTGCCACAGGTGAGCTCCAAGTTCGTGCACGTGCAGT
GGAAGAAGCCGATCTACGACGGCGGCGCCCGCATCACGGGTTACGTCATC
GAGGCGCGCGACGTGCGCTCCGAGAAGTGGGTCAAGTGTCACCTGGGCGA
GGTGCTGAAGCTGGAGCACGTCATCACCGACATCAAGGCGCTGCAGAAGT
ACCAGTTCAGGGTCAAGGTGGGCAGCTTCAAGCCTTTAGCATTCTTTATA
ACAAAAATTTAATAACTTAGTTTTTTTTAAATTTTATTGATTTCTAGCAC
AATTTAGCTTTATTTGTACCCAATCTTTGCGAGATCTGAATAAAATATTG
CCATTATTATCACCATAATTGTTTATTTCCAGAGGAAAGTTATGATCCAA
TACACAAGTTCTACAAATGTGCCACTACTGTTGATCAGTCTAGTACAGAG
TAGGACATGCAAACATGGCACTGTTACAGTTTCTAGTCTAAAAAAAGTTC
AAAATATTGACAAAACAACTCAAAAGTAGGCCAATCGCCTTCTATAATTA
AATTTTCTTTATTTTTGTTTTCCTTCCAGGCGAAGAATGAGGCTGGAAAC
ATCAGCGAGCCGTCCAACCTGGCCGGCCCCGTGCTGACCAAGGACGACCT
CCAGCCTCCCACCATCACTCTGGACGTCAAGATCAAGGACAACAAGGTCC
AAGTTCACGCCGGCGACAAGCTGGTCATCTCAGGCCACCTCGGCGGGAAA
CCTGTCCCGAC Coding sequence (CDS) from alignment at Sc0000008:5580279..5581889+ >transcript:BL96392_cuf71 ID=transcript:BL96392_cuf71|Name=transcript:BL96392_cuf71|organism=Branchiostoma lanceolatum|type=CDS|length=2400bp|location=Sequence derived from alignment at Sc0000008:5580279..5581889+ (Branchiostoma lanceolatum)
TACATGGTCGAACGGAAGGAGAAGAACTCCCCCCGCTGGATCAAGGCCAC
CAAAATGCCCATCTCAGACAACGAGTTTACCTCTATGGGTCTGATGGAAG
GGCTGCAGTACATGCACCGCGTGCGCGCCGTGAACCAGGCCGGCACCGGG
CCCGCCTGCGACCCGACCCCGCTGGTCATCGCCATGGACCCGATCGCCCC
GCCGCGCAACCTCGAGATCCTCGAGGTGAGCTCCAAGTTCGTGCACGTGC
AGTGGAAGAAGCCGATCTACGACGGCGGCGCCCGCATCACGGGTTACGTC
ATCGAGGCGCGCGACGTGCGCTCCGAGAAGTGGGTCAAGTGTCACCTGGG
CGAGGTGCTGAAGCTGGAGCACGTCATCACCGACATCAAGGCGCTGCAGA
AGTACCAGTTCAGGGTCAAGGCGAAGAATGAGGCTGGAAACATCAGCGAG
CCGTCCAACCTGGCCGGCCCCGTGCTGACCAAGGACGACCTCCAGCCTCC
CACCATCACTCTGGACGTCAAGATCAAGGACAACAAGGTCCAAGTTCACG
CCGGCGACAAGCTGGTCATCTCAGGCCACCTCGGCGGGAAACCTGTCCCG
TACATGGTCGAACGGAAGGAGAAGAACTCCCCCCGCTGGATCAAGGCCAC
CAAAATGCCCATCTCAGACAACGAGTTTACCTCTATGGGTCTGATGGAAG
GGCTGCAGTACATGCACCGCGTGCGCGCCGTGAACCAGGCCGGCACCGGG
CCCGCCTGCGACCCGACCCCGCTGGTCATCGCCATGGACCCGATCGCCCC
GCCGCGCAACCTCGAGATCCTCGAGGTGAGCTCCAAGTTCGTGCACGTGC
AGTGGAAGAAGCCGATCTACGACGGCGGCGCCCGCATCACGGGTTACGTC
ATCGAGGCGCGCGACGTGCGCTCCGAGAAGTGGGTCAAGTGTCACCTGGG
CGAGGTGCTGAAGCTGGAGCACGTCATCACCGACATCAAGGCGCTGCAGA
AGTACCAGTTCAGGGTCAAGGCGAAGAATGAGGCTGGAAACATCAGCGAG
CCGTCCAACCTGGCCGGCCCCGTGCTGACCAAGGACGACCTCCAGCCTCC
CACCATCACTCTGGACGTCAAGATCAAGGACAACAAGGTCCAAGTTCACG
CCGGCGACAAGCTGGTCATCTCAGGCCACCTCGGCGGGAAACCTGTCCCG
TACATGGTCGAACGGAAGGAGAAGAACTCCCCCCGCTGGATCAAGGCCAC
CAAAATGCCCATCTCAGACAACGAGTTTACCTCTATGGGTCTGATGGAAG
GGCTGCAGTACATGCACCGCGTGCGCGCCGTGAACCAGGCCGGCACCGGG
CCCGCCTGCGACCCGACCCCGCTGGTCATCGCCATGGACCCGATCGCCCC
GCCGCGCAACCTCGAGATCCTCGAGGTGAGCTCCAAGTTCGTGCACGTGC
AGTGGAAGAAGCCGATCTACGACGGCGGCGCCCGCATCACGGGTTACGTC
ATCGAGGCGCGCGACGTGCGCTCCGAGAAGTGGGTCAAGTGTCACCTGGG
CGAGGTGCTGAAGCTGGAGCACGTCATCACCGACATCAAGGCGCTGCAGA
AGTACCAGTTCAGGGTCAAGGCGAAGAATGAGGCTGGAAACATCAGCGAG
CCGTCCAACCTGGCCGGCCCCGTGCTGACCAAGGACGACCTCCAGCCTCC
CACCATCACTCTGGACGTCAAGATCAAGGACAACAAGGTCCAAGTTCACG
CCGGCGACAAGCTGGTCATCTCAGGCCACCTCGGCGGGAAACCTGTCCCG
TACATGGTCGAACGGAAGGAGAAGAACTCCCCCCGCTGGATCAAGGCCAC
CAAAATGCCCATCTCAGACAACGAGTTTACCTCTATGGGTCTGATGGAAG
GGCTGCAGTACATGCACCGCGTGCGCGCCGTGAACCAGGCCGGCACCGGG
CCCGCCTGCGACCCGACCCCGCTGGTCATCGCCATGGACCCGATCGCCCC
GCCGCGCAACCTCGAGATCCTCGAGGTGAGCTCCAAGTTCGTGCACGTGC
AGTGGAAGAAGCCGATCTACGACGGCGGCGCCCGCATCACGGGTTACGTC
ATCGAGGCGCGCGACGTGCGCTCCGAGAAGTGGGTCAAGTGTCACCTGGG
CGAGGTGCTGAAGCTGGAGCACGTCATCACCGACATCAAGGCGCTGCAGA
AGTACCAGTTCAGGGTCAAGGCGAAGAATGAGGCTGGAAACATCAGCGAG
CCGTCCAACCTGGCCGGCCCCGTGCTGACCAAGGACGACCTCCAGCCTCC
CACCATCACTCTGGACGTCAAGATCAAGGACAACAAGGTCCAAGTTCACG
CCGGCGACAAGCTGGTCATCTCAGGCCACCTCGGCGGGAAACCTGTCCCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:5580279..5581889 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96392_cuf71 |
| Biotype | protein_coding |
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