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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96390_cuf69 >transcript:BL96390_cuf69-protein ID=transcript:BL96390_cuf69-protein|Name=transcript:BL96390_cuf69|organism=Branchiostoma lanceolatum|type=polypeptide|length=264bp
ADKPSPPQAPVETSKVSGETCMVKWKPPKDDGGSPIHSYIIEKRDTTRQV
WTRAATVDAGKLSAQVTKLTRGQQYVMRVSAQNAIGTSDPQIGEPFLARD
FFDVPGPPGQPEIIKVCKKYVHLTWTPPINDGGSKVTGYLIERSDLCPSI
TTFWIRCTDEVIKDTEHVLYNLFEGCDYEFRVTACNAAGWGIPSEGSEEV
KVRDPVAPPVAPGKPELLELTKSSIKLNWARPYYDGGSPIIGYILESRKE
GQEEWTRVHRPEYI Run BLAST on NCBI mRNA from alignment at Sc0000008:5571045..5573480+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96390_cuf69 ID=transcript:BL96390_cuf69|Name=transcript:BL96390_cuf69|organism=Branchiostoma lanceolatum|type=mRNA|length=2436bp|location=Sequence derived from alignment at Sc0000008:5571045..5573480+ (Branchiostoma lanceolatum)
TTGCAGACAAGCCCTCTCCGCCGCAGGCTCCTGTGGAGACCAGCAAGGTG
AGCGGGGAGACCTGCATGGTGAAGTGGAAGCCGCCCAAGGACGACGGCGG
CAGCCCCATCCACTCCTACATCATCGAGAAGCGCGACACCACGCGCCAGG
TCTGGACACGGGCAGCCACCGTGGACGCCGGTGAGTTTGTGATCTAGTTG
TCTATCTGTCTACCCATTGAACACAAGGAGACTGAAAACAGAAACAACAT
TGGCCCCTCTCTACCAGTACTAGGAATAAATGATTCTAAAGCAAGTCTAA
TAGATCTCAGAATATACCATAGTGAAACTGACAAGTTCATTAAACTACAA
AATAAAGCAGTACAGAGCATTCAGATATTCATTTAAGTCCAAATACTTAA
GCATGGGGGAAATTTTGACAATTGATGTTTCGTCATTGTATGAATCGCTC
GTTAATTCAACGATATTGAAAGTAATGATATTGATATGTACTTTTATATA
CTTATTAGGGACATCAATTTTATATCCATATTAGGGATATTTCATATCTA
TATGTAGATAAAAGTTGATAAAAGCCACTGGTGCATCTCTTACAAGCACG
TTTTGTCTTTCCTTCCCCAGGCAAGCTGAGTGCCCAGGTGACGAAGCTGA
CCCGCGGACAGCAGTACGTGATGCGCGTGTCCGCACAGAACGCCATCGGC
ACCAGCGACCCGCAAATCGGGGAACCCTTCCTCGCGAGGGACTTCTTCGG
TACGTAACAGGAATTTTGCTATAACTTTGGTTACATAGTCTAACAGCAGA
ACATGCTGTAGTTAGATAAAGAAGAAAACAGCCACATTTTGGAAGCCTTT
CTTCATATCACACTTAATTTTCTTATCTGGAAGTGTGTGTTTTTTTCATT
GGCAATGGGATCAAACTAAATCAGTTGTCCTTTCAGCTTTACACTAGTTT
TACCATTACGCCTTGTGAATGCCCGTCGAGTTTGTTCTATTTCTTGATTT
GTCTCATGTGAACTAAGATTAAGACACACATCTCATTATCTTGTAGCCTG
TACTTCTTTTCTGATAGACAAAGTGGCTTAGTTCCTTTTTCAGCTTTGAC
ACTACATGTAGATCTTACCATTATGCCTTGGAAATGCCTGCCGTGTTTGT
TCCATTTCTTAACTTACGTGAGCTAAGGTTAAGACGTCTTGCTTGCCCCT
CCAGACGTTCCCGGCCCACCTGGCCAACCCGAGATTATCAAGGTGTGCAA
GAAGTACGTGCACCTAACCTGGACTCCACCAATCAACGACGGCGGCAGCA
AGGTCACAGGTTACCTCATCGAGAGGAGTGACCTTTGCCCCTCCATCACG
ACCTTCTGGATCCGCTGCACGGACGAGGTCATTAAGGACACGGAACATGT
CCTCTACAACCTGTTCGAGGGCTGCGACTACGAGTTCCGCGTCACGGCCT
GCAACGCCGCAGGATGGGGCATCCCCAGCGAGGGGTCAGAGGAGGTCAAG
GTTCGCGACCCTGTCGGTAAGTCGAGTACTCTTATTTGCTGATTAACAAA
GCAGCAATTGTCACAATTTTCAGACAAAATATTCAGCATTTGATGTTAAA
TACTATCAAGCTGCTGTGGTGAACTTGTTGACTGCTGAAGGCAAATGAGC
CAAGCAAAGTAGCAAAATGTAGTTTACAGCAATGGAAACAATTATATTAA
TAGTCACAGTGTTGAAATATTAAAGGCAATGTGCACTCTGGGTAATGTGT
TGGACTACTACATGCAACGTGTAATATTGCTGGATGACTCTAAACTGTGC
CGACTTCTGCCCTCAACAGCGCCCCCTGTCGCCCCTGGCAAGCCTGAGCT
ACTGGAGCTGACCAAGTCCTCCATCAAGCTGAACTGGGCACGCCCCTATT
ACGACGGCGGCAGCCCCATCATCGGATACATCCTGGAGTCCAGGAAGGAA
GGCCAGGAGGAATGGACCAGAGTTCACAGGTCAGTATTGGGGGCACAGGT
CAGTCAAGGTTCACTGATTAGTCAGGGTTCACTCTTCGGTAATAACGGCT
CACAAGTTTCCCCTATTCTATCATTCTCTAAACAGTATGCAAAATGATGT
ACACATTATGATTTTTTCCTTATTTGTATACTTGGGACAAATAGTGAAAT
TTCTTTAGTGTCCTTTGCATACATGGGACAACTTAGAAAAGCCCTCAAGG
TAAACATGGTCAGCATCTTCTTTGAAAACAGTCTTCTATACACTTTAAGG
GCTTCTCTTGAGTACTTAAGAGATGTGATGCATCCTTGAGAAGCTTATCA
AGGATCGCATTTAATGTTAAGATCAGTTGTTATCCAGTAAAGCTGCATTC
TGCGGCTATTTTTTTCATAGAAAGTTCGACAAATTAGCACGTTGTTCCTA
ACAAACACCGTTCCTTCCTGCAGGCCTGAGTACATC Coding sequence (CDS) from alignment at Sc0000008:5571045..5573480+ >transcript:BL96390_cuf69 ID=transcript:BL96390_cuf69|Name=transcript:BL96390_cuf69|organism=Branchiostoma lanceolatum|type=CDS|length=3960bp|location=Sequence derived from alignment at Sc0000008:5571045..5573480+ (Branchiostoma lanceolatum)
GCAGACAAGCCCTCTCCGCCGCAGGCTCCTGTGGAGACCAGCAAGGTGAG
CGGGGAGACCTGCATGGTGAAGTGGAAGCCGCCCAAGGACGACGGCGGCA
GCCCCATCCACTCCTACATCATCGAGAAGCGCGACACCACGCGCCAGGTC
TGGACACGGGCAGCCACCGTGGACGCCGGCAAGCTGAGTGCCCAGGTGAC
GAAGCTGACCCGCGGACAGCAGTACGTGATGCGCGTGTCCGCACAGAACG
CCATCGGCACCAGCGACCCGCAAATCGGGGAACCCTTCCTCGCGAGGGAC
TTCTTCGACGTTCCCGGCCCACCTGGCCAACCCGAGATTATCAAGGTGTG
CAAGAAGTACGTGCACCTAACCTGGACTCCACCAATCAACGACGGCGGCA
GCAAGGTCACAGGTTACCTCATCGAGAGGAGTGACCTTTGCCCCTCCATC
ACGACCTTCTGGATCCGCTGCACGGACGAGGTCATTAAGGACACGGAACA
TGTCCTCTACAACCTGTTCGAGGGCTGCGACTACGAGTTCCGCGTCACGG
CCTGCAACGCCGCAGGATGGGGCATCCCCAGCGAGGGGTCAGAGGAGGTC
AAGGTTCGCGACCCTGTCGCGCCCCCTGTCGCCCCTGGCAAGCCTGAGCT
ACTGGAGCTGACCAAGTCCTCCATCAAGCTGAACTGGGCACGCCCCTATT
ACGACGGCGGCAGCCCCATCATCGGATACATCCTGGAGTCCAGGAAGGAA
GGCCAGGAGGAATGGACCAGAGTTCACAGGCCTGAGTACATCGCAGACAA
GCCCTCTCCGCCGCAGGCTCCTGTGGAGACCAGCAAGGTGAGCGGGGAGA
CCTGCATGGTGAAGTGGAAGCCGCCCAAGGACGACGGCGGCAGCCCCATC
CACTCCTACATCATCGAGAAGCGCGACACCACGCGCCAGGTCTGGACACG
GGCAGCCACCGTGGACGCCGGCAAGCTGAGTGCCCAGGTGACGAAGCTGA
CCCGCGGACAGCAGTACGTGATGCGCGTGTCCGCACAGAACGCCATCGGC
ACCAGCGACCCGCAAATCGGGGAACCCTTCCTCGCGAGGGACTTCTTCGA
CGTTCCCGGCCCACCTGGCCAACCCGAGATTATCAAGGTGTGCAAGAAGT
ACGTGCACCTAACCTGGACTCCACCAATCAACGACGGCGGCAGCAAGGTC
ACAGGTTACCTCATCGAGAGGAGTGACCTTTGCCCCTCCATCACGACCTT
CTGGATCCGCTGCACGGACGAGGTCATTAAGGACACGGAACATGTCCTCT
ACAACCTGTTCGAGGGCTGCGACTACGAGTTCCGCGTCACGGCCTGCAAC
GCCGCAGGATGGGGCATCCCCAGCGAGGGGTCAGAGGAGGTCAAGGTTCG
CGACCCTGTCGCGCCCCCTGTCGCCCCTGGCAAGCCTGAGCTACTGGAGC
TGACCAAGTCCTCCATCAAGCTGAACTGGGCACGCCCCTATTACGACGGC
GGCAGCCCCATCATCGGATACATCCTGGAGTCCAGGAAGGAAGGCCAGGA
GGAATGGACCAGAGTTCACAGGCCTGAGTACATCGCAGACAAGCCCTCTC
CGCCGCAGGCTCCTGTGGAGACCAGCAAGGTGAGCGGGGAGACCTGCATG
GTGAAGTGGAAGCCGCCCAAGGACGACGGCGGCAGCCCCATCCACTCCTA
CATCATCGAGAAGCGCGACACCACGCGCCAGGTCTGGACACGGGCAGCCA
CCGTGGACGCCGGCAAGCTGAGTGCCCAGGTGACGAAGCTGACCCGCGGA
CAGCAGTACGTGATGCGCGTGTCCGCACAGAACGCCATCGGCACCAGCGA
CCCGCAAATCGGGGAACCCTTCCTCGCGAGGGACTTCTTCGACGTTCCCG
GCCCACCTGGCCAACCCGAGATTATCAAGGTGTGCAAGAAGTACGTGCAC
CTAACCTGGACTCCACCAATCAACGACGGCGGCAGCAAGGTCACAGGTTA
CCTCATCGAGAGGAGTGACCTTTGCCCCTCCATCACGACCTTCTGGATCC
GCTGCACGGACGAGGTCATTAAGGACACGGAACATGTCCTCTACAACCTG
TTCGAGGGCTGCGACTACGAGTTCCGCGTCACGGCCTGCAACGCCGCAGG
ATGGGGCATCCCCAGCGAGGGGTCAGAGGAGGTCAAGGTTCGCGACCCTG
TCGCGCCCCCTGTCGCCCCTGGCAAGCCTGAGCTACTGGAGCTGACCAAG
TCCTCCATCAAGCTGAACTGGGCACGCCCCTATTACGACGGCGGCAGCCC
CATCATCGGATACATCCTGGAGTCCAGGAAGGAAGGCCAGGAGGAATGGA
CCAGAGTTCACAGGCCTGAGTACATCGCAGACAAGCCCTCTCCGCCGCAG
GCTCCTGTGGAGACCAGCAAGGTGAGCGGGGAGACCTGCATGGTGAAGTG
GAAGCCGCCCAAGGACGACGGCGGCAGCCCCATCCACTCCTACATCATCG
AGAAGCGCGACACCACGCGCCAGGTCTGGACACGGGCAGCCACCGTGGAC
GCCGGCAAGCTGAGTGCCCAGGTGACGAAGCTGACCCGCGGACAGCAGTA
CGTGATGCGCGTGTCCGCACAGAACGCCATCGGCACCAGCGACCCGCAAA
TCGGGGAACCCTTCCTCGCGAGGGACTTCTTCGACGTTCCCGGCCCACCT
GGCCAACCCGAGATTATCAAGGTGTGCAAGAAGTACGTGCACCTAACCTG
GACTCCACCAATCAACGACGGCGGCAGCAAGGTCACAGGTTACCTCATCG
AGAGGAGTGACCTTTGCCCCTCCATCACGACCTTCTGGATCCGCTGCACG
GACGAGGTCATTAAGGACACGGAACATGTCCTCTACAACCTGTTCGAGGG
CTGCGACTACGAGTTCCGCGTCACGGCCTGCAACGCCGCAGGATGGGGCA
TCCCCAGCGAGGGGTCAGAGGAGGTCAAGGTTCGCGACCCTGTCGCGCCC
CCTGTCGCCCCTGGCAAGCCTGAGCTACTGGAGCTGACCAAGTCCTCCAT
CAAGCTGAACTGGGCACGCCCCTATTACGACGGCGGCAGCCCCATCATCG
GATACATCCTGGAGTCCAGGAAGGAAGGCCAGGAGGAATGGACCAGAGTT
CACAGGCCTGAGTACATCGCAGACAAGCCCTCTCCGCCGCAGGCTCCTGT
GGAGACCAGCAAGGTGAGCGGGGAGACCTGCATGGTGAAGTGGAAGCCGC
CCAAGGACGACGGCGGCAGCCCCATCCACTCCTACATCATCGAGAAGCGC
GACACCACGCGCCAGGTCTGGACACGGGCAGCCACCGTGGACGCCGGCAA
GCTGAGTGCCCAGGTGACGAAGCTGACCCGCGGACAGCAGTACGTGATGC
GCGTGTCCGCACAGAACGCCATCGGCACCAGCGACCCGCAAATCGGGGAA
CCCTTCCTCGCGAGGGACTTCTTCGACGTTCCCGGCCCACCTGGCCAACC
CGAGATTATCAAGGTGTGCAAGAAGTACGTGCACCTAACCTGGACTCCAC
CAATCAACGACGGCGGCAGCAAGGTCACAGGTTACCTCATCGAGAGGAGT
GACCTTTGCCCCTCCATCACGACCTTCTGGATCCGCTGCACGGACGAGGT
CATTAAGGACACGGAACATGTCCTCTACAACCTGTTCGAGGGCTGCGACT
ACGAGTTCCGCGTCACGGCCTGCAACGCCGCAGGATGGGGCATCCCCAGC
GAGGGGTCAGAGGAGGTCAAGGTTCGCGACCCTGTCGCGCCCCCTGTCGC
CCCTGGCAAGCCTGAGCTACTGGAGCTGACCAAGTCCTCCATCAAGCTGA
ACTGGGCACGCCCCTATTACGACGGCGGCAGCCCCATCATCGGATACATC
CTGGAGTCCAGGAAGGAAGGCCAGGAGGAATGGACCAGAGTTCACAGGCC
TGAGTACATC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:5571045..5573480 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96390_cuf69 |
| Biotype | protein_coding |
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