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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96385_cuf64 >transcript:BL96385_cuf64-protein ID=transcript:BL96385_cuf64-protein|Name=transcript:BL96385_cuf64|organism=Branchiostoma lanceolatum|type=polypeptide|length=241bp
VVKAGTAIKLHARIEGYPYPSAQWLFKGEPLEAGDRYSMKTTKFTADMVL
KPSMRSDTGRYHLVVKNLAGTRKAPINVKVLDRPGPPQAPVQFEDIHQDQ
VTLRWNVPADDGGTEVTNYIVERREAAKTFWTTVNSNLSRTRIMVPKLIE
GTPYVFRIKAENKMGISDPLDSEPVTPKSPYDLPGPPLELRIINVQSDSM
SLTWLEPDFDGGSPVQGYFLEKRDKISKRWLKIEKEMLTTT Run BLAST on NCBI mRNA from alignment at Sc0000008:5548126..5550971+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96385_cuf64 ID=transcript:BL96385_cuf64|Name=transcript:BL96385_cuf64|organism=Branchiostoma lanceolatum|type=mRNA|length=2846bp|location=Sequence derived from alignment at Sc0000008:5548126..5550971+ (Branchiostoma lanceolatum)
GTCGTGAAGGCTGGAACCGCCATCAAACTGCACGCCCGCATCGAGGGCTA
CCCCTACCCCAGCGCACAGTGGCTCTTCAAGGTAAGCCCTACCCCACAAG
CTCAATTCTCACTTTATAAGCAAGCTAATCGAAAGAGTTGGGACAGACGA
TAAGCCCCAGCCCATGGTTCTCAGTNTAAGCAAGCTAATCGAAAGAGTTG
GGACAGACGATAAGCCCCAGCCCATGGTGATCAGTACTGGTTGAAAAGAG
CTAGGAGAACTTCTCTGTTGCATGGAACTAGACGGTTTTGTTATGGCATG
ACGTCAATAAGTGGTGTGTTATGGCGTGATAACAGACCACTTATTGTGGG
CAATGAAGGCTTCTGATTGGTCGACGCCATCTGGCCATGTGATAATAGAC
TATATCATCTATCATTCCTCTCACAACAAGTGTAAAATGTATTTCTCATC
AATCTTTATTAAAATTCATTTGTGTGTAGTGTTATCTTATTTGTACTAGA
GATTCATTTAGATTGTGCTGTGCATTGCAAGTAGTATTGTTATAGTTGGC
AGGACTCTAGGAAGAACAGTGAAGATTAGTAGTATCTTGATAAATGATGC
ACTCGGGAATTAGCGGCGTTGGCAGCGTCTTGTTTGGATTTGGAGACTAG
TCCTTGCATGGCAGTAACTGTCACAGTTTTGGCATACAAAGCCGGTGGAT
TTGTGTGTTCGGGTGAAACAAATAAGTAAATGTTTTCCATCTCCATTTTC
AGGGCGAGCCCCTTGAGGCCGGAGATCGCTACTCCATGAAGACGACGAAG
TTTACGGCAGACATGGTGTTGAAGCCGAGCATGCGCAGTGACACCGGACG
GTACCACCTGGTGGTGAAGAACCTGGCGGGAACCCGCAAGGCGCCCATCA
ACGTCAAGGTTCTCGGTGAGTTTTCGATGTTAATCATGTCCCCACTTTCT
TTGAAACCTCATAGCTTGTGCAATGAAGATGTTGCTTTATTGTTAAAGTA
TTGTCCATAATGTGATATATATCATACTGAGACAAAATAAGAAAAGTCAT
GCCACGGCTAAGGATTCCCCAGCCAATAGAATACTCCCAACAATAGAAAA
GAATAGTTGATGTCTTATGTTGGTTCATTAATCTGCACCCCAGTATGTAG
AAGAGTAAGTATTAATCATCTAGAGCTCGATACAGTGGTATTCCTCATTT
GAATGCAACCAACACTTACGATGAAAACACAGCCATCAGAACGATATCTG
CTCGGCATGTTTGATACTGTTCATACCTGTTCTTACCTGTATTCTCACCT
GTATTCTCACCTGTACGTCCCCAGACCGTCCCGGCCCGCCACAGGCCCCG
GTTCAGTTCGAGGACATCCACCAGGACCAGGTGACGCTCAGGTGGAACGT
ACCTGCCGACGACGGCGGCACGGAGGTCACCAACTACATCGTGGAGCGCC
GCGAGGCCGCCAAGACTTTCTGGACAACCGTCAACTCTAACCTGTCAAGG
TGCGTACAGTCCCTCTAAAACCTTATTAAAATATTATTTTCTAATCATGA
ATACCTAAGAAGATTTCTATTGAATGACATTGATCAAAATTCAGAATCCT
TTAGCTCTGCTGTATCAGGTAGTGAATGTCACAACAATAATCTTAGTATC
AGGATTTCAAGGCTTGCAAGAAGTACCTTTATTTTTTTTAACGTTTGTTG
AAAATACAGATATACCCGAAGTATAGCATTACAATTTAAAATGATACCGT
CGTAACACTGTCTTTCTACCTGCCCAGGACGAGGATCATGGTACCGAAGC
TGATCGAGGGCACGCCGTACGTGTTCCGCATCAAGGCCGAGAACAAGATG
GGCATCAGCGACCCGCTCGACTCCGAGCCCGTCACGCCCAAGAGCCCATA
CGGTCAGTCTGGGTTCTACTTCACTGTAAACTTGACAGAAAAAAAAGCAC
TGAAAATGAGAAAGCCCAAGATAACCATCCTTTGTACCGTGCAATACCAT
AGTTACTGATTTAGCACTCTTGTATAAATTGTTGTTGTTTTTCCAAGACA
ATTTGTTAGTACAAAAACACATAGATATCACCTTTCTTGCTAGATAAATT
GAAACTCCAAGTCCACATAAAAATAGATAGCTGCTTATTGTCATGCTGTC
ATTAGTTAGAATGCTAATTGTGATGAAAAGTCAGGATTGATCAATTACAT
AGATGGACCTATCATGATGAAGTAAATAACCGATTCTGTCTGCTGGTTCC
AGACCTGCCCGGTCCTCCGCTGGAGCTGCGCATCATTAACGTGCAGAGCG
ACTCCATGAGCCTGACCTGGCTGGAGCCCGACTTCGACGGCGGCTCGCCC
GTCCAGGGATACTTCCTCGAGAAGCGCGACAAGATCAGCAAGAGGTGGCT
CAAGGTGGGTTCAGCTTCTTAAAGATTCTTCTCGTCTCAAAATTATAGAA
GTTGAAGTTTCTGAAAGGTGGAAATCATGATGCGGTTTCTCCAAGTAGAT
TTTGTCAAAATTTACCACACCTTGTAATCTTTTGATTTAAACTAATATGT
ACTTGAAAAATCTTAATCACGATGCTTATACTTCTTAAGATTACCATACT
GTATATATACATTTCTCTGACGATAAGATGACTGTTACTCTTTGTGCATG
TGGACCTTTGCTCTGTGATTCACAATTTTCCAATTTCTTTTGCTAGAACA
GTTTTAGAATTGTAATCTCCACATTTCAAATCTTTTATTTGTACAATAGA
TTTAAAATTGCTAATCCCTGATAAAATTGATGAATAGATAAATAAATAAA
ATCCCGACGTACATTTCAGATCGAAAAGGAGATGCTTACAACTACT Coding sequence (CDS) from alignment at Sc0000008:5548126..5550971+ >transcript:BL96385_cuf64 ID=transcript:BL96385_cuf64|Name=transcript:BL96385_cuf64|organism=Branchiostoma lanceolatum|type=CDS|length=4338bp|location=Sequence derived from alignment at Sc0000008:5548126..5550971+ (Branchiostoma lanceolatum)
GTCGTGAAGGCTGGAACCGCCATCAAACTGCACGCCCGCATCGAGGGCTA
CCCCTACCCCAGCGCACAGTGGCTCTTCAAGGGCGAGCCCCTTGAGGCCG
GAGATCGCTACTCCATGAAGACGACGAAGTTTACGGCAGACATGGTGTTG
AAGCCGAGCATGCGCAGTGACACCGGACGGTACCACCTGGTGGTGAAGAA
CCTGGCGGGAACCCGCAAGGCGCCCATCAACGTCAAGGTTCTCGACCGTC
CCGGCCCGCCACAGGCCCCGGTTCAGTTCGAGGACATCCACCAGGACCAG
GTGACGCTCAGGTGGAACGTACCTGCCGACGACGGCGGCACGGAGGTCAC
CAACTACATCGTGGAGCGCCGCGAGGCCGCCAAGACTTTCTGGACAACCG
TCAACTCTAACCTGTCAAGGACGAGGATCATGGTACCGAAGCTGATCGAG
GGCACGCCGTACGTGTTCCGCATCAAGGCCGAGAACAAGATGGGCATCAG
CGACCCGCTCGACTCCGAGCCCGTCACGCCCAAGAGCCCATACGACCTGC
CCGGTCCTCCGCTGGAGCTGCGCATCATTAACGTGCAGAGCGACTCCATG
AGCCTGACCTGGCTGGAGCCCGACTTCGACGGCGGCTCGCCCGTCCAGGG
ATACTTCCTCGAGAAGCGCGACAAGATCAGCAAGAGGTGGCTCAAGATCG
AAAAGGAGATGCTTACAACTACTGTCGTGAAGGCTGGAACCGCCATCAAA
CTGCACGCCCGCATCGAGGGCTACCCCTACCCCAGCGCACAGTGGCTCTT
CAAGGGCGAGCCCCTTGAGGCCGGAGATCGCTACTCCATGAAGACGACGA
AGTTTACGGCAGACATGGTGTTGAAGCCGAGCATGCGCAGTGACACCGGA
CGGTACCACCTGGTGGTGAAGAACCTGGCGGGAACCCGCAAGGCGCCCAT
CAACGTCAAGGTTCTCGACCGTCCCGGCCCGCCACAGGCCCCGGTTCAGT
TCGAGGACATCCACCAGGACCAGGTGACGCTCAGGTGGAACGTACCTGCC
GACGACGGCGGCACGGAGGTCACCAACTACATCGTGGAGCGCCGCGAGGC
CGCCAAGACTTTCTGGACAACCGTCAACTCTAACCTGTCAAGGACGAGGA
TCATGGTACCGAAGCTGATCGAGGGCACGCCGTACGTGTTCCGCATCAAG
GCCGAGAACAAGATGGGCATCAGCGACCCGCTCGACTCCGAGCCCGTCAC
GCCCAAGAGCCCATACGACCTGCCCGGTCCTCCGCTGGAGCTGCGCATCA
TTAACGTGCAGAGCGACTCCATGAGCCTGACCTGGCTGGAGCCCGACTTC
GACGGCGGCTCGCCCGTCCAGGGATACTTCCTCGAGAAGCGCGACAAGAT
CAGCAAGAGGTGGCTCAAGATCGAAAAGGAGATGCTTACAACTACTGTCG
TGAAGGCTGGAACCGCCATCAAACTGCACGCCCGCATCGAGGGCTACCCC
TACCCCAGCGCACAGTGGCTCTTCAAGGGCGAGCCCCTTGAGGCCGGAGA
TCGCTACTCCATGAAGACGACGAAGTTTACGGCAGACATGGTGTTGAAGC
CGAGCATGCGCAGTGACACCGGACGGTACCACCTGGTGGTGAAGAACCTG
GCGGGAACCCGCAAGGCGCCCATCAACGTCAAGGTTCTCGACCGTCCCGG
CCCGCCACAGGCCCCGGTTCAGTTCGAGGACATCCACCAGGACCAGGTGA
CGCTCAGGTGGAACGTACCTGCCGACGACGGCGGCACGGAGGTCACCAAC
TACATCGTGGAGCGCCGCGAGGCCGCCAAGACTTTCTGGACAACCGTCAA
CTCTAACCTGTCAAGGACGAGGATCATGGTACCGAAGCTGATCGAGGGCA
CGCCGTACGTGTTCCGCATCAAGGCCGAGAACAAGATGGGCATCAGCGAC
CCGCTCGACTCCGAGCCCGTCACGCCCAAGAGCCCATACGACCTGCCCGG
TCCTCCGCTGGAGCTGCGCATCATTAACGTGCAGAGCGACTCCATGAGCC
TGACCTGGCTGGAGCCCGACTTCGACGGCGGCTCGCCCGTCCAGGGATAC
TTCCTCGAGAAGCGCGACAAGATCAGCAAGAGGTGGCTCAAGATCGAAAA
GGAGATGCTTACAACTACTGTCGTGAAGGCTGGAACCGCCATCAAACTGC
ACGCCCGCATCGAGGGCTACCCCTACCCCAGCGCACAGTGGCTCTTCAAG
GGCGAGCCCCTTGAGGCCGGAGATCGCTACTCCATGAAGACGACGAAGTT
TACGGCAGACATGGTGTTGAAGCCGAGCATGCGCAGTGACACCGGACGGT
ACCACCTGGTGGTGAAGAACCTGGCGGGAACCCGCAAGGCGCCCATCAAC
GTCAAGGTTCTCGACCGTCCCGGCCCGCCACAGGCCCCGGTTCAGTTCGA
GGACATCCACCAGGACCAGGTGACGCTCAGGTGGAACGTACCTGCCGACG
ACGGCGGCACGGAGGTCACCAACTACATCGTGGAGCGCCGCGAGGCCGCC
AAGACTTTCTGGACAACCGTCAACTCTAACCTGTCAAGGACGAGGATCAT
GGTACCGAAGCTGATCGAGGGCACGCCGTACGTGTTCCGCATCAAGGCCG
AGAACAAGATGGGCATCAGCGACCCGCTCGACTCCGAGCCCGTCACGCCC
AAGAGCCCATACGACCTGCCCGGTCCTCCGCTGGAGCTGCGCATCATTAA
CGTGCAGAGCGACTCCATGAGCCTGACCTGGCTGGAGCCCGACTTCGACG
GCGGCTCGCCCGTCCAGGGATACTTCCTCGAGAAGCGCGACAAGATCAGC
AAGAGGTGGCTCAAGATCGAAAAGGAGATGCTTACAACTACTGTCGTGAA
GGCTGGAACCGCCATCAAACTGCACGCCCGCATCGAGGGCTACCCCTACC
CCAGCGCACAGTGGCTCTTCAAGGGCGAGCCCCTTGAGGCCGGAGATCGC
TACTCCATGAAGACGACGAAGTTTACGGCAGACATGGTGTTGAAGCCGAG
CATGCGCAGTGACACCGGACGGTACCACCTGGTGGTGAAGAACCTGGCGG
GAACCCGCAAGGCGCCCATCAACGTCAAGGTTCTCGACCGTCCCGGCCCG
CCACAGGCCCCGGTTCAGTTCGAGGACATCCACCAGGACCAGGTGACGCT
CAGGTGGAACGTACCTGCCGACGACGGCGGCACGGAGGTCACCAACTACA
TCGTGGAGCGCCGCGAGGCCGCCAAGACTTTCTGGACAACCGTCAACTCT
AACCTGTCAAGGACGAGGATCATGGTACCGAAGCTGATCGAGGGCACGCC
GTACGTGTTCCGCATCAAGGCCGAGAACAAGATGGGCATCAGCGACCCGC
TCGACTCCGAGCCCGTCACGCCCAAGAGCCCATACGACCTGCCCGGTCCT
CCGCTGGAGCTGCGCATCATTAACGTGCAGAGCGACTCCATGAGCCTGAC
CTGGCTGGAGCCCGACTTCGACGGCGGCTCGCCCGTCCAGGGATACTTCC
TCGAGAAGCGCGACAAGATCAGCAAGAGGTGGCTCAAGATCGAAAAGGAG
ATGCTTACAACTACTGTCGTGAAGGCTGGAACCGCCATCAAACTGCACGC
CCGCATCGAGGGCTACCCCTACCCCAGCGCACAGTGGCTCTTCAAGGGCG
AGCCCCTTGAGGCCGGAGATCGCTACTCCATGAAGACGACGAAGTTTACG
GCAGACATGGTGTTGAAGCCGAGCATGCGCAGTGACACCGGACGGTACCA
CCTGGTGGTGAAGAACCTGGCGGGAACCCGCAAGGCGCCCATCAACGTCA
AGGTTCTCGACCGTCCCGGCCCGCCACAGGCCCCGGTTCAGTTCGAGGAC
ATCCACCAGGACCAGGTGACGCTCAGGTGGAACGTACCTGCCGACGACGG
CGGCACGGAGGTCACCAACTACATCGTGGAGCGCCGCGAGGCCGCCAAGA
CTTTCTGGACAACCGTCAACTCTAACCTGTCAAGGACGAGGATCATGGTA
CCGAAGCTGATCGAGGGCACGCCGTACGTGTTCCGCATCAAGGCCGAGAA
CAAGATGGGCATCAGCGACCCGCTCGACTCCGAGCCCGTCACGCCCAAGA
GCCCATACGACCTGCCCGGTCCTCCGCTGGAGCTGCGCATCATTAACGTG
CAGAGCGACTCCATGAGCCTGACCTGGCTGGAGCCCGACTTCGACGGCGG
CTCGCCCGTCCAGGGATACTTCCTCGAGAAGCGCGACAAGATCAGCAAGA
GGTGGCTCAAGATCGAAAAGGAGATGCTTACAACTACT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000008 | genome | Sc0000008:5548126..5550971 + |
Properties
| Property Name | Value |
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| Transcript id | BL96385_cuf64 |
| Biotype | protein_coding |
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