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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96378_cuf42 >transcript:BL96378_cuf42-protein ID=transcript:BL96378_cuf42-protein|Name=transcript:BL96378_cuf42|organism=Branchiostoma lanceolatum|type=polypeptide|length=189bp
DVKMEQEGPTYKLFLRNCLLKDIGNVKFETGNLKSSAILMVKALPAEIRR
NLQDVEIFEGETATFEIEMARPIEGFKWFRKGLELQPEDDIIFEQEGLLV
YRVTLKNCLQGHTGNVKFVTGQLQSTASLIVKAIPVDVIRDLEDQEVWEK
ETASFEVELSQPVSDFHWIQKKQDLHPSARVEFQTDENT Run BLAST on NCBI mRNA from alignment at Sc0000008:5458951..5460250+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96378_cuf42 ID=transcript:BL96378_cuf42|Name=transcript:BL96378_cuf42|organism=Branchiostoma lanceolatum|type=mRNA|length=1300bp|location=Sequence derived from alignment at Sc0000008:5458951..5460250+ (Branchiostoma lanceolatum)
GACGTCAAGATGGAACAGGAGGGACCGACTTACAAACTCTTCCTGCGCAA
CTGCCTGCTTAAGGATATTGGCAACGTTAAGTTTGAGACAGGAAACCTTA
AATCTTCTGCCATCCTTATGGTCAAAGGTACAACACCTGTTCTGAAGCTC
GTGTTGATGCGTTTCCCGTCAGTCTTATCAAGCGTAGTCCTCATTGGTTT
TCTCCTTTGTAACATTGAGATTATTAGCCAATGAGGATCTTGCATCAGGC
TGACGCTTCATCCTTCATTCATCCTTTCTCTAACCATTGCCTTCACAATC
TTTCGCCCTCCCCATTTCATCAACATTACACTTTCCTCTCAACAGCGCTC
CCTGCCGAGATCAGGCGCAACCTGCAGGACGTAGAAATCTTTGAAGGCGA
AACCGCGACGTTTGAAATCGAGATGGCGCGACCGATCGAGGGATTCAAAT
GGTTCCGAAAGGGACTGGAGCTCCAGCCTGAAGACGATATCATCTTTGAG
CAGGAGGGTCTCCTGGTTTACAGAGTTACTCTGAAAAACTGTCTGCAGGG
CCACACGGGCAACGTCAAGTTCGTAACTGGCCAGCTGCAGTCCACGGCCT
CGCTCATTGTCAAAGGTAGACGGCTGGAAGATACTCTCTGCTTAGTGCAA
TTGCTTTCATTGAGCGCAGAAAAGATGCGACTTTCATAGAGCGATTAAAT
TTTAGATTCATTAGACTGCTTCTGCACTTTGCTTACAGGTATTGCTACAG
CTACAGCACAGTGGCGTAGGTTTTAGAGAGTAAACAAATGCTAAATCCGA
TGCTCAGAATTTTGCTCATAGAAGTTGCCTTGTTTGCTTAGGGATGCGTA
AAATGCTTCATATTGCGCTATTCGTTGCAGAAGATCATACAAATATAAAG
CCAACTTTACTGCTGCGAGTACGACTGTAAGTCTTGTAATGCTTTTAAGT
GCTATCACATCTGCGGCGGCATTTTCATCTTACGCCTTTTCTTCCAGCAT
AGCGAGTTTATTATCTGTCGCATCATTTTGCAACGCTGCACATTTATACG
CAGGCAGGGAAAAGACGCATGCCCAGTAAACAGACATCCAAGCATTCATG
TATTCACCTCTGCATATCACATTGCCAGCCATCCCTGTCGACGTCATACG
TGACCTAGAGGACCAGGAAGTCTGGGAAAAGGAGACGGCGTCGTTCGAAG
TCGAACTGTCGCAGCCGGTCTCCGACTTCCACTGGATCCAGAAGAAACAG
GACCTGCACCCGAGCGCGCGCGTCGAGTTCCAGACGGACGAGAACACACA
Coding sequence (CDS) from alignment at Sc0000008:5458951..5460250+ >transcript:BL96378_cuf42 ID=transcript:BL96378_cuf42|Name=transcript:BL96378_cuf42|organism=Branchiostoma lanceolatum|type=CDS|length=1701bp|location=Sequence derived from alignment at Sc0000008:5458951..5460250+ (Branchiostoma lanceolatum)
GACGTCAAGATGGAACAGGAGGGACCGACTTACAAACTCTTCCTGCGCAA
CTGCCTGCTTAAGGATATTGGCAACGTTAAGTTTGAGACAGGAAACCTTA
AATCTTCTGCCATCCTTATGGTCAAAGCGCTCCCTGCCGAGATCAGGCGC
AACCTGCAGGACGTAGAAATCTTTGAAGGCGAAACCGCGACGTTTGAAAT
CGAGATGGCGCGACCGATCGAGGGATTCAAATGGTTCCGAAAGGGACTGG
AGCTCCAGCCTGAAGACGATATCATCTTTGAGCAGGAGGGTCTCCTGGTT
TACAGAGTTACTCTGAAAAACTGTCTGCAGGGCCACACGGGCAACGTCAA
GTTCGTAACTGGCCAGCTGCAGTCCACGGCCTCGCTCATTGTCAAAGCCA
TCCCTGTCGACGTCATACGTGACCTAGAGGACCAGGAAGTCTGGGAAAAG
GAGACGGCGTCGTTCGAAGTCGAACTGTCGCAGCCGGTCTCCGACTTCCA
CTGGATCCAGAAGAAACAGGACCTGCACCCGAGCGCGCGCGTCGAGTTCC
AGACGGACGAGAACACAGACGTCAAGATGGAACAGGAGGGACCGACTTAC
AAACTCTTCCTGCGCAACTGCCTGCTTAAGGATATTGGCAACGTTAAGTT
TGAGACAGGAAACCTTAAATCTTCTGCCATCCTTATGGTCAAAGCGCTCC
CTGCCGAGATCAGGCGCAACCTGCAGGACGTAGAAATCTTTGAAGGCGAA
ACCGCGACGTTTGAAATCGAGATGGCGCGACCGATCGAGGGATTCAAATG
GTTCCGAAAGGGACTGGAGCTCCAGCCTGAAGACGATATCATCTTTGAGC
AGGAGGGTCTCCTGGTTTACAGAGTTACTCTGAAAAACTGTCTGCAGGGC
CACACGGGCAACGTCAAGTTCGTAACTGGCCAGCTGCAGTCCACGGCCTC
GCTCATTGTCAAAGCCATCCCTGTCGACGTCATACGTGACCTAGAGGACC
AGGAAGTCTGGGAAAAGGAGACGGCGTCGTTCGAAGTCGAACTGTCGCAG
CCGGTCTCCGACTTCCACTGGATCCAGAAGAAACAGGACCTGCACCCGAG
CGCGCGCGTCGAGTTCCAGACGGACGAGAACACAGACGTCAAGATGGAAC
AGGAGGGACCGACTTACAAACTCTTCCTGCGCAACTGCCTGCTTAAGGAT
ATTGGCAACGTTAAGTTTGAGACAGGAAACCTTAAATCTTCTGCCATCCT
TATGGTCAAAGCGCTCCCTGCCGAGATCAGGCGCAACCTGCAGGACGTAG
AAATCTTTGAAGGCGAAACCGCGACGTTTGAAATCGAGATGGCGCGACCG
ATCGAGGGATTCAAATGGTTCCGAAAGGGACTGGAGCTCCAGCCTGAAGA
CGATATCATCTTTGAGCAGGAGGGTCTCCTGGTTTACAGAGTTACTCTGA
AAAACTGTCTGCAGGGCCACACGGGCAACGTCAAGTTCGTAACTGGCCAG
CTGCAGTCCACGGCCTCGCTCATTGTCAAAGCCATCCCTGTCGACGTCAT
ACGTGACCTAGAGGACCAGGAAGTCTGGGAAAAGGAGACGGCGTCGTTCG
AAGTCGAACTGTCGCAGCCGGTCTCCGACTTCCACTGGATCCAGAAGAAA
CAGGACCTGCACCCGAGCGCGCGCGTCGAGTTCCAGACGGACGAGAACAC
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:5458951..5460250 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96378_cuf42 |
| Biotype | protein_coding |
|
