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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96374_cuf31 >transcript:BL96374_cuf31-protein ID=transcript:BL96374_cuf31-protein|Name=transcript:BL96374_cuf31|organism=Branchiostoma lanceolatum|type=polypeptide|length=279bp
EEKLDFKAQLKSRKVEKKEEVEISKEEAASFIRVPKNCSVLEGESATFDC
KVVGDPAPEVTWYFNDADLSASERCRVEMTEPGVCTLVLQETRVCDAGWY
SCTVRNALGEQTMHAKLAVEPKVEEPTEPPTLSARAFLQKFVQYEMLYHR
FHVTGHLPEVKQTKQSTAEEEAPPLIPPSFSREYGEIRAMEGGSVRFVAA
VSGSPEIEVAWFKDGAELHEGPKHWILFDDNVAVLAIPRVDLADEGFYTC
RARNAAGMVEISAPLIIEGVYTNGHAVKL Run BLAST on NCBI mRNA from alignment at Sc0000008:5368646..5370605+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96374_cuf31 ID=transcript:BL96374_cuf31|Name=transcript:BL96374_cuf31|organism=Branchiostoma lanceolatum|type=mRNA|length=1960bp|location=Sequence derived from alignment at Sc0000008:5368646..5370605+ (Branchiostoma lanceolatum)
AGAAGAAAAACTAGACTTCAAAGCTCAACTAAAATCCAGGAAGGTGGAGA
AGAAGGAAGAGGTAGAAATCTCGAAGGAAGAAGCAGCTAGCTTCATCCGA
GTCCCGAAGAACTGCTCTGTCCTTGAGGGTGAATCGGCGACCTTCGATTG
TAAGGTTGTCGGAGACCCCGCACCGGAAGTGACGTGGTACTTCAACGACG
CCGACCTGTCCGCGAGCGAGCGGTGCCGCGTGGAGATGACCGAGCCTGGC
GTGTGCACGCTGGTTCTACAGGAGACGCGCGTGTGCGACGCCGGGTGGTA
CTCCTGCACGGTGAGGAACGCGCTCGGGGAGCAGACCATGCACGCCAAGC
TGGCGGTGGAGCCGAAGGTTGAGGAGCCGACGGAGCCGCCCACCCTGTCC
GCGCGCGCCTTCCTGCAGAAGTTCGTGCAGTACGAGATGCTGTACCACAG
GTTCCACGTCACCGGGCACCTGCCGGAGGTCAAGCAGACAAAACAGTCTA
CAGGTAGATGCTGTCAAGTATGACATCATCACGACGTCATCCCAGCCACC
ATGACGTCACCCAACCATCATGACGTCATCCCAGCCATCATGACGTCACC
CAGTCGACGAATCATGACGTCATCTAAACCCATTCCAGAGAATGACGTCA
CCTCCATCAGGACGCACTTGCACTTCATCGCATTGCCGTTACAGCGCGAC
AATCATTGCTGTCACAGCGCGACATTTTCTTCACAGTTCATTTTGCCGGA
AAGCAAAGTTACCATACTACAAACCTCACTACACACACATTCTCATCTCA
CCATGATCTCTTCGATATTCCCTTTTCAGGTGATTACATATTAGAGTGAG
TGTGGAAATCTAACGGCAATGTTTCTCTCATGGTTTAGCCGAAGAGGAGG
CTCCCCCGCTGATCCCGCCGTCGTTCTCGCGAGAGTACGGCGAGATCCGG
GCCATGGAGGGCGGGTCCGTGCGGTTCGTTGCCGCCGTGTCCGGCTCCCC
GGAGATCGAGGTCGCCTGGTTCAAGGACGGAGCTGAGCTCCACGAGGGAC
CCAAGCACTGGATCCTGTTCGATGACAATGTTGCTGTACTGGCTATTCCC
AGGTAAACTCAGAAAGACTTCAAACCCGCGGGAAAAATAATTTAGAATCT
CCGTCTCGCTTAACTTTCATATCCTAGATATAAAGATGCTTGGATTACCA
TTCATCATTCTTTTCATCATTATTCTATAAAGTTATTAGAAAAGATACTG
AAACTCATGATACGAATGGCATCTATTACCTATTTGGTAATATTCATTTT
GTATTCTTATTCTGTAGTTTCTCTTATGCTGTTTTCAACAACTTTGATCT
GTAGCAAACATAGCGTTCTCGAGGCACTTAGTAGTTCTGGTCAGATTTGG
CTGACTGCAACTTCATGATTTCATTTTGTATTCTTATTCTGTAGTTTCTC
TTATGCTGTTTTCAACAACTTTGATCTGTAGCAAACATAGCGTTCTCGAG
GCACTTAGTAGTTCTGGTCAGATTTGGCTGACTGCAACTTCATGATCTGA
ACATTTTGGTATCACACCGATGTTTCCTTCCCGTAGGGTTGATCTGGCTG
ACGAAGGCTTCTACACCTGCCGCGCGCGCAACGCGGCCGGGATGGTGGAG
ATCTCCGCGCCACTCATCATCGAAGGTGTGTACACCAACGGGCATGCCGT
CAAGTTGTGACGCTGACTTTGATGATGCCGACGTTGTATTTGAATGAACC
AATCGCCGTTGCCTAGTTCTTGCATGCGGCGCACGTGACTGGTGCATGAT
ATTCTGACGTTGATCACGTGAACTTCTGGAGGTGGCAACATGACTGCATG
GAACTTATTCTTATTCTAAAGAAAGTACAGAAAATGCCTGTTTTATATCA
TGGACAACGGCAGCCCGTGGCGACGTCTCTTGCAGTGTGAAACAGTTGCT
TGTATGACCG Coding sequence (CDS) from alignment at Sc0000008:5368646..5370605+ >transcript:BL96374_cuf31 ID=transcript:BL96374_cuf31|Name=transcript:BL96374_cuf31|organism=Branchiostoma lanceolatum|type=CDS|length=2520bp|location=Sequence derived from alignment at Sc0000008:5368646..5370605+ (Branchiostoma lanceolatum)
GAAGAAAAACTAGACTTCAAAGCTCAACTAAAATCCAGGAAGGTGGAGAA
GAAGGAAGAGGTAGAAATCTCGAAGGAAGAAGCAGCTAGCTTCATCCGAG
TCCCGAAGAACTGCTCTGTCCTTGAGGGTGAATCGGCGACCTTCGATTGT
AAGGTTGTCGGAGACCCCGCACCGGAAGTGACGTGGTACTTCAACGACGC
CGACCTGTCCGCGAGCGAGCGGTGCCGCGTGGAGATGACCGAGCCTGGCG
TGTGCACGCTGGTTCTACAGGAGACGCGCGTGTGCGACGCCGGGTGGTAC
TCCTGCACGGTGAGGAACGCGCTCGGGGAGCAGACCATGCACGCCAAGCT
GGCGGTGGAGCCGAAGGTTGAGGAGCCGACGGAGCCGCCCACCCTGTCCG
CGCGCGCCTTCCTGCAGAAGTTCGTGCAGTACGAGATGCTGTACCACAGG
TTCCACGTCACCGGGCACCTGCCGGAGGTCAAGCAGACAAAACAGTCTAC
AGCCGAAGAGGAGGCTCCCCCGCTGATCCCGCCGTCGTTCTCGCGAGAGT
ACGGCGAGATCCGGGCCATGGAGGGCGGGTCCGTGCGGTTCGTTGCCGCC
GTGTCCGGCTCCCCGGAGATCGAGGTCGCCTGGTTCAAGGACGGAGCTGA
GCTCCACGAGGGACCCAAGCACTGGATCCTGTTCGATGACAATGTTGCTG
TACTGGCTATTCCCAGGGTTGATCTGGCTGACGAAGGCTTCTACACCTGC
CGCGCGCGCAACGCGGCCGGGATGGTGGAGATCTCCGCGCCACTCATCAT
CGAAGGTGTGTACACCAACGGGCATGCCGTCAAGTTGTGAGAAGAAAAAC
TAGACTTCAAAGCTCAACTAAAATCCAGGAAGGTGGAGAAGAAGGAAGAG
GTAGAAATCTCGAAGGAAGAAGCAGCTAGCTTCATCCGAGTCCCGAAGAA
CTGCTCTGTCCTTGAGGGTGAATCGGCGACCTTCGATTGTAAGGTTGTCG
GAGACCCCGCACCGGAAGTGACGTGGTACTTCAACGACGCCGACCTGTCC
GCGAGCGAGCGGTGCCGCGTGGAGATGACCGAGCCTGGCGTGTGCACGCT
GGTTCTACAGGAGACGCGCGTGTGCGACGCCGGGTGGTACTCCTGCACGG
TGAGGAACGCGCTCGGGGAGCAGACCATGCACGCCAAGCTGGCGGTGGAG
CCGAAGGTTGAGGAGCCGACGGAGCCGCCCACCCTGTCCGCGCGCGCCTT
CCTGCAGAAGTTCGTGCAGTACGAGATGCTGTACCACAGGTTCCACGTCA
CCGGGCACCTGCCGGAGGTCAAGCAGACAAAACAGTCTACAGCCGAAGAG
GAGGCTCCCCCGCTGATCCCGCCGTCGTTCTCGCGAGAGTACGGCGAGAT
CCGGGCCATGGAGGGCGGGTCCGTGCGGTTCGTTGCCGCCGTGTCCGGCT
CCCCGGAGATCGAGGTCGCCTGGTTCAAGGACGGAGCTGAGCTCCACGAG
GGACCCAAGCACTGGATCCTGTTCGATGACAATGTTGCTGTACTGGCTAT
TCCCAGGGTTGATCTGGCTGACGAAGGCTTCTACACCTGCCGCGCGCGCA
ACGCGGCCGGGATGGTGGAGATCTCCGCGCCACTCATCATCGAAGGTGTG
TACACCAACGGGCATGCCGTCAAGTTGTGAGAAGAAAAACTAGACTTCAA
AGCTCAACTAAAATCCAGGAAGGTGGAGAAGAAGGAAGAGGTAGAAATCT
CGAAGGAAGAAGCAGCTAGCTTCATCCGAGTCCCGAAGAACTGCTCTGTC
CTTGAGGGTGAATCGGCGACCTTCGATTGTAAGGTTGTCGGAGACCCCGC
ACCGGAAGTGACGTGGTACTTCAACGACGCCGACCTGTCCGCGAGCGAGC
GGTGCCGCGTGGAGATGACCGAGCCTGGCGTGTGCACGCTGGTTCTACAG
GAGACGCGCGTGTGCGACGCCGGGTGGTACTCCTGCACGGTGAGGAACGC
GCTCGGGGAGCAGACCATGCACGCCAAGCTGGCGGTGGAGCCGAAGGTTG
AGGAGCCGACGGAGCCGCCCACCCTGTCCGCGCGCGCCTTCCTGCAGAAG
TTCGTGCAGTACGAGATGCTGTACCACAGGTTCCACGTCACCGGGCACCT
GCCGGAGGTCAAGCAGACAAAACAGTCTACAGCCGAAGAGGAGGCTCCCC
CGCTGATCCCGCCGTCGTTCTCGCGAGAGTACGGCGAGATCCGGGCCATG
GAGGGCGGGTCCGTGCGGTTCGTTGCCGCCGTGTCCGGCTCCCCGGAGAT
CGAGGTCGCCTGGTTCAAGGACGGAGCTGAGCTCCACGAGGGACCCAAGC
ACTGGATCCTGTTCGATGACAATGTTGCTGTACTGGCTATTCCCAGGGTT
GATCTGGCTGACGAAGGCTTCTACACCTGCCGCGCGCGCAACGCGGCCGG
GATGGTGGAGATCTCCGCGCCACTCATCATCGAAGGTGTGTACACCAACG
GGCATGCCGTCAAGTTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:5368646..5370605 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96374_cuf31 |
| Biotype | protein_coding |
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