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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96337_cuf2 >transcript:BL96337_cuf2-protein ID=transcript:BL96337_cuf2-protein|Name=transcript:BL96337_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=168bp
QEYKECTCHTSCKDLAKENHTCSCEPGCGCVEGMVLNNGECIRAIDCPCY
YPPHEKFYKFGATFAKDECTTCACTKGGIECDMDCNISPEDCKEGEVFEN
VPGKCCGCFPSTCTNGMEYQSICACHRTCTNLTATCEMDTCQPGCACPDD
MVFNGLECVGPSQCTCEY Run BLAST on NCBI mRNA from alignment at Sc0000411:149176..150895+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96337_cuf2 ID=transcript:BL96337_cuf2|Name=transcript:BL96337_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1720bp|location=Sequence derived from alignment at Sc0000411:149176..150895+ (Branchiostoma lanceolatum)
CAGGAATACAAGGAGTGCACCTGCCACACCAGCTGTAAGGACCTGGCTAA
GGAGAACCACACCTGCAGCTGTGAGCCCGGGTGTGGCTGTGTGGAGGGGA
TGGTACTCAACAATGGGGAGTGCATCAGAGCCATCGACTGCCCCTGCTAC
TACCCACCACATGAGAAATTCTACAAGGTTGGTCTTACAGTCGTTTAATT
TCATTGAGGTCATTGAGTTGTTCCTTTTTTCAGCTGTGTGTGGCTCCAAA
CAATTCTTCAAGGTGACTGTGAAATTTGTTAAACTATTTAACAGATTTTG
AAGAATAGCTCTCCTGCTCTTTCTAGAGATATTAAGAAATATTGTCTTTT
CATTTTTGATAGTGTCTTATACTTGTAACTAGGAAGAAAGCTTGCAGGTC
TTTCAATATTTTATTTTTATAATTATATAATTATTGTGTTAGGTATGAAT
TATTATAATGAAATTCAGTATATTATGACTTCTTAGTATTCTAATGCATG
TTGGTGTCAATAAAGATTCATTGTTTGTTTATTTGTTTGTTTGATTGATT
GATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTTAAGGC
TATACATGTAGTTTTTGGCATGAAACAATCAGAAACCATAATTTTCTTAT
CTGTAGATAAAACTAAGATGAATTACTGTTTTCCATTCTAACCCTTCATA
ACAAACCATGTTGATAAAACTGGTTTAGTTTTTAGCAGCTTTCAAAATTT
AATCTAACAACACTATTCTCTATCCAATAGTTTGGTGCCACCTTTGCCAA
GGATGAGTGCACCACGTGTGCCTGTACTAAGGGTGGTATCGAATGTGACA
TGGACTGTAACATCTCACCTGAAGACTGTAAGGAGGGAGAGGTGTTTGAG
AACGTGCCTGGGAAATGTTGTGGATGCTTCCCAAGTAAGGATATCTATTA
TGCAACCCATCTATATCACCCTGTTGAATTCTATATGCCGAAATTTAATG
CTGTGAAGCAGGCAGTTGGGGAAGTATGATGATTTCAGATTATATCAAGT
GTCAAGTGTTCAAAAGCAGTATTTTAACTGTTTCAACATCTCTTTTGATT
TGTGTAGAGCAAGTTTCTTGGACTATGGTAACTCTAATTTTCAAGACTAA
CCAACTTATGCTTAATTAAGTCCTTTTGATTGATCATTAAAGCATTACAG
TCATTAGGACAACATTTTAAAGCAATGGTCAACTTGACGCTCATAAGATC
TTTCAAAGACATTGATGTATTGTACATCTATCCTTCTTTTTATTATCATT
TGGAAAAGTTGCGTCCTGCAAAGTAAAGCTGAATTAGAATTCATTTTTCT
GAAAGAAAATATTGTTTCTTTTCATACTGGGATATCTGTGCAAATTATAT
GGAAGATTCCTAAAGCGGGATGTTTATTTTGTTTGTTTGTTTGTTTGTCC
CAGGCACATAAATGTAATGGAGTGCCTGTGCCTTTCATTGCATCTTTACT
AACTTGAATACCTGAACATGGATACTCATTTGTTTGTTTGTCTTAGGCAC
CTGTACCAATGGTATGGAGTACCAGTCCATCTGTGCCTGTCATCGCACCT
GTACAAACCTGACAGCCACCTGTGAGATGGACACCTGCCAGCCAGGCTGT
GCCTGCCCTGATGACATGGTCTTCAACGGTCTGGAGTGTGTGGGGCCCTC
ACAGTGCACATGTGAATACG Coding sequence (CDS) from alignment at Sc0000411:149176..150895+ >transcript:BL96337_cuf2 ID=transcript:BL96337_cuf2|Name=transcript:BL96337_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1512bp|location=Sequence derived from alignment at Sc0000411:149176..150895+ (Branchiostoma lanceolatum)
CAGGAATACAAGGAGTGCACCTGCCACACCAGCTGTAAGGACCTGGCTAA
GGAGAACCACACCTGCAGCTGTGAGCCCGGGTGTGGCTGTGTGGAGGGGA
TGGTACTCAACAATGGGGAGTGCATCAGAGCCATCGACTGCCCCTGCTAC
TACCCACCACATGAGAAATTCTACAAGTTTGGTGCCACCTTTGCCAAGGA
TGAGTGCACCACGTGTGCCTGTACTAAGGGTGGTATCGAATGTGACATGG
ACTGTAACATCTCACCTGAAGACTGTAAGGAGGGAGAGGTGTTTGAGAAC
GTGCCTGGGAAATGTTGTGGATGCTTCCCAAGCACCTGTACCAATGGTAT
GGAGTACCAGTCCATCTGTGCCTGTCATCGCACCTGTACAAACCTGACAG
CCACCTGTGAGATGGACACCTGCCAGCCAGGCTGTGCCTGCCCTGATGAC
ATGGTCTTCAACGGTCTGGAGTGTGTGGGGCCCTCACAGTGCACATGTGA
ATACCAGGAATACAAGGAGTGCACCTGCCACACCAGCTGTAAGGACCTGG
CTAAGGAGAACCACACCTGCAGCTGTGAGCCCGGGTGTGGCTGTGTGGAG
GGGATGGTACTCAACAATGGGGAGTGCATCAGAGCCATCGACTGCCCCTG
CTACTACCCACCACATGAGAAATTCTACAAGTTTGGTGCCACCTTTGCCA
AGGATGAGTGCACCACGTGTGCCTGTACTAAGGGTGGTATCGAATGTGAC
ATGGACTGTAACATCTCACCTGAAGACTGTAAGGAGGGAGAGGTGTTTGA
GAACGTGCCTGGGAAATGTTGTGGATGCTTCCCAAGCACCTGTACCAATG
GTATGGAGTACCAGTCCATCTGTGCCTGTCATCGCACCTGTACAAACCTG
ACAGCCACCTGTGAGATGGACACCTGCCAGCCAGGCTGTGCCTGCCCTGA
TGACATGGTCTTCAACGGTCTGGAGTGTGTGGGGCCCTCACAGTGCACAT
GTGAATACCAGGAATACAAGGAGTGCACCTGCCACACCAGCTGTAAGGAC
CTGGCTAAGGAGAACCACACCTGCAGCTGTGAGCCCGGGTGTGGCTGTGT
GGAGGGGATGGTACTCAACAATGGGGAGTGCATCAGAGCCATCGACTGCC
CCTGCTACTACCCACCACATGAGAAATTCTACAAGTTTGGTGCCACCTTT
GCCAAGGATGAGTGCACCACGTGTGCCTGTACTAAGGGTGGTATCGAATG
TGACATGGACTGTAACATCTCACCTGAAGACTGTAAGGAGGGAGAGGTGT
TTGAGAACGTGCCTGGGAAATGTTGTGGATGCTTCCCAAGCACCTGTACC
AATGGTATGGAGTACCAGTCCATCTGTGCCTGTCATCGCACCTGTACAAA
CCTGACAGCCACCTGTGAGATGGACACCTGCCAGCCAGGCTGTGCCTGCC
CTGATGACATGGTCTTCAACGGTCTGGAGTGTGTGGGGCCCTCACAGTGC
ACATGTGAATAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000411 | genome | Sc0000411:149176..150895 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96337_cuf2 |
| Biotype | protein_coding |
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