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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96330_cuf0 >transcript:BL96330_cuf0-protein ID=transcript:BL96330_cuf0-protein|Name=transcript:BL96330_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=235bp
SLYVIVAMVFKDVFAGKAKSLISQELAKDNRSFVDLSSVAFWSEQLTAAV
SMVIWFNLVKICSLLRVSSRVRMYLDVLIKIRTRLLGSLIIYVLIVTGFS
MSGHLLFVPYVAAFQSLGRAVASLTFLPWEDDVSYDVLVTANEIVGPLFL
FVANFVLLYLLISFTAAVFASATSGVVGKQGRGRVAAVQQRKERLAKAAR
EARNAAPPVRNTLHYCNCDETNECFGQVHSTESQV Run BLAST on NCBI mRNA from alignment at Sc0000216:435080..437413- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96330_cuf0 ID=transcript:BL96330_cuf0|Name=transcript:BL96330_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2334bp|location=Sequence derived from alignment at Sc0000216:435080..437413- (Branchiostoma lanceolatum)
CGTCACTCTACGTCATCGTGGCGATGGTGTTTAAGGACGTCTTCGCAGGG
AAAGCAAAGTCACTCATCAGCCAAGAGCTGGCCAAAGGTGTGTGGTTTGC
TGTTTGAATACCATTAGGCTACACCAAGTAATTTTTATGGATGACGTACT
TTGGAGACCCTAAATCTAATGGGAGAGCGCGAAAAAAAAGAAGGGCCGAA
AAAAACAAGATGCCTAGATTTGAAATATAATAGTCGACGACACATGTCAG
AACACAAATTGAATGAGAGAACACAGTGTAATAACTAAGAATTCTTTTAT
TCATCATGAAAACAGCAATAATTTGAATAAATCAGTTGAAGTTGAACAGC
AGTTGTCCTGTCCTGTTTCTTTCCATATCCCATTGATTTTGCAGGCCTGC
AGAAACATATTATATCAAAAAGGAACTCTTTGGTCATAGTTACAGGAAGC
GGATTTTTTTTTTATCTGGGAACAGACCAAAATCAATGCGCGCGCGGACG
TCATCCATAAAAATTACTTGGTGTAGCCTTTTCTGTATTTGTAATTACCG
CATCACTGCTCAAGTCAGAAATCAAAACTTCTTTAAGACATCAACAAATG
TCATTGTTCCATCGAGTGTGAAGCAATTTGAAGTTGGTTTCCAAAGCTGA
AATAGTTGCACGAATGTATAAAAGTTCTGAGTTACAAAGGCCTTAATTTA
TGTTCATGTTCCACGCAGACAACCGCAGCTTCGTGGACCTGTCCAGTGTC
GCCTTCTGGAGTGAGCAGCTCACCGCCGCCGTTTCCATGGTGATCTGGTT
CAACCTGGTGAAGATCTGCAGCCTGTTGAGGGTCAGCTCACGGGTCCGTA
TGTATCTCGGTAAGCGTTAGATACAAGGCGTGTGTAGTCGAGCAGGTAAG
CCCCTATGTCACACACTTGACCCGCGGTACCATGACCCGCGGTATTCTGT
GATATAATTCATCCCTCTGTTTGGTTCATGGAAGACTGCATTAATCTATA
TCTAATTATTTTCTTTTTCGTTTTACAGATGTCCTGATAAAGATTCGCAC
GAGGCTGCTCGGAAGCCTGATCATCTACGTTCTGATTGTCACAGGCTTCA
GTATGTCAGGTGATTAGGCGGACTTGTACTTTATTTTACATATATTTATT
ATTTTTATTATTATTTTACCGTACATTTGTACTTCGACACTGTTGTCAAC
ATGCAATTAGCCTACGGGCATGAATTTGCAATAAACTATTATATTGGAAC
ATCATGCTCTTCGTTATTATGTTCCTAGTTCTCTACTCTCACTGGCTTAT
CTAGTTGTATAGAATGTTACACGTTGATGTCATGATCATGTGGACCCGCA
TTAGCTGGGCAAAGCCTAATCTCCAAGCAGATCCACACCGGGTGCGAAAA
TGGTAGTATGCTAGCCAGAGAAGGTCTAGTCAGCCAGAGAGGGTCCAATA
GCCCGGTATTGTACCCTCTCTGGCTGGCTGGACATTCTCTGGCTAGTATA
CTACCATTTTCGCGCCCGGTGTGGATCTGCTTGGAGATTAGGCAAAGCCA
TATGTTACATGACACAATAATCAAGCCCATCCATCCATCCAAGCATACAA
CCACGCAAACGCCCACCCATCCATCCATCCATCCACCCACGCAAACAGCC
ATCCATCCATCCATCCATCCATCAATCCACTTACCCACGCAAACACCCAT
CCATCCATCCATCCACCTACGCAAACACCCACCCATCCATCCATCCATCC
GTCCGTCCATCCATCCATCAATTCAACCAACCAACCAACCAACCAACCAA
CCAACCAGCCCACCAACCAACCAAGAGATATTATATTTTCAGCTTCATTT
CCTCATTATAATGGTAGATGCATATGCTTGCTCGTCTAGCTCGGATCTTT
ACAGTCTCTCTAGAGTTACAAGTTGTTCTTTCCAGGGCATCTCCTGTTCG
TCCCTTACGTCGCAGCTTTCCAGTCCCTGGGCCGTGCCGTGGCCAGCCTG
ACGTTCTTACCGTGGGAGGATGACGTCAGCTATGACGTGCTCGTCACAGC
CAATGAGATTGTTGGACCGCTGTTCCTCTTCGTCGCCAACTTCGTCCTCC
TGTACCTGCTGATCAGCTTCACAGCGGCCGTGTTCGCCAGCGCTACATCC
GGCGTGGTGGGAAAGCAGGGGAGGGGGAGGGTCGCCGCGGTGCAGCAGCG
GAAGGAGCGGCTTGCCAAGGCGGCCAGGGAGGCCAGAAACGCCGCGCCTC
CAGTGCGCAACACTCTGCACTATTGTAACTGTGATGAAACGAACGAGTGT
TTTGGTCAAGTTCATTCAACCGAGTCACAGGTTT Coding sequence (CDS) from alignment at Sc0000216:435080..437413- >transcript:BL96330_cuf0 ID=transcript:BL96330_cuf0|Name=transcript:BL96330_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2820bp|location=Sequence derived from alignment at Sc0000216:435080..437413- (Branchiostoma lanceolatum)
TCACTCTACGTCATCGTGGCGATGGTGTTTAAGGACGTCTTCGCAGGGAA
AGCAAAGTCACTCATCAGCCAAGAGCTGGCCAAAGACAACCGCAGCTTCG
TGGACCTGTCCAGTGTCGCCTTCTGGAGTGAGCAGCTCACCGCCGCCGTT
TCCATGGTGATCTGGTTCAACCTGGTGAAGATCTGCAGCCTGTTGAGGGT
CAGCTCACGGGTCCGTATGTATCTCGATGTCCTGATAAAGATTCGCACGA
GGCTGCTCGGAAGCCTGATCATCTACGTTCTGATTGTCACAGGCTTCAGT
ATGTCAGGGCATCTCCTGTTCGTCCCTTACGTCGCAGCTTTCCAGTCCCT
GGGCCGTGCCGTGGCCAGCCTGACGTTCTTACCGTGGGAGGATGACGTCA
GCTATGACGTGCTCGTCACAGCCAATGAGATTGTTGGACCGCTGTTCCTC
TTCGTCGCCAACTTCGTCCTCCTGTACCTGCTGATCAGCTTCACAGCGGC
CGTGTTCGCCAGCGCTACATCCGGCGTGGTGGGAAAGCAGGGGAGGGGGA
GGGTCGCCGCGGTGCAGCAGCGGAAGGAGCGGCTTGCCAAGGCGGCCAGG
GAGGCCAGAAACGCCGCGCCTCCAGTGCGCAACACTCTGCACTATTGTAA
CTGTGATGAAACGAACGAGTGTTTTGGTCAAGTTCATTCAACCGAGTCAC
AGGTTTCACTCTACGTCATCGTGGCGATGGTGTTTAAGGACGTCTTCGCA
GGGAAAGCAAAGTCACTCATCAGCCAAGAGCTGGCCAAAGACAACCGCAG
CTTCGTGGACCTGTCCAGTGTCGCCTTCTGGAGTGAGCAGCTCACCGCCG
CCGTTTCCATGGTGATCTGGTTCAACCTGGTGAAGATCTGCAGCCTGTTG
AGGGTCAGCTCACGGGTCCGTATGTATCTCGATGTCCTGATAAAGATTCG
CACGAGGCTGCTCGGAAGCCTGATCATCTACGTTCTGATTGTCACAGGCT
TCAGTATGTCAGGGCATCTCCTGTTCGTCCCTTACGTCGCAGCTTTCCAG
TCCCTGGGCCGTGCCGTGGCCAGCCTGACGTTCTTACCGTGGGAGGATGA
CGTCAGCTATGACGTGCTCGTCACAGCCAATGAGATTGTTGGACCGCTGT
TCCTCTTCGTCGCCAACTTCGTCCTCCTGTACCTGCTGATCAGCTTCACA
GCGGCCGTGTTCGCCAGCGCTACATCCGGCGTGGTGGGAAAGCAGGGGAG
GGGGAGGGTCGCCGCGGTGCAGCAGCGGAAGGAGCGGCTTGCCAAGGCGG
CCAGGGAGGCCAGAAACGCCGCGCCTCCAGTGCGCAACACTCTGCACTAT
TGTAACTGTGATGAAACGAACGAGTGTTTTGGTCAAGTTCATTCAACCGA
GTCACAGGTTTCACTCTACGTCATCGTGGCGATGGTGTTTAAGGACGTCT
TCGCAGGGAAAGCAAAGTCACTCATCAGCCAAGAGCTGGCCAAAGACAAC
CGCAGCTTCGTGGACCTGTCCAGTGTCGCCTTCTGGAGTGAGCAGCTCAC
CGCCGCCGTTTCCATGGTGATCTGGTTCAACCTGGTGAAGATCTGCAGCC
TGTTGAGGGTCAGCTCACGGGTCCGTATGTATCTCGATGTCCTGATAAAG
ATTCGCACGAGGCTGCTCGGAAGCCTGATCATCTACGTTCTGATTGTCAC
AGGCTTCAGTATGTCAGGGCATCTCCTGTTCGTCCCTTACGTCGCAGCTT
TCCAGTCCCTGGGCCGTGCCGTGGCCAGCCTGACGTTCTTACCGTGGGAG
GATGACGTCAGCTATGACGTGCTCGTCACAGCCAATGAGATTGTTGGACC
GCTGTTCCTCTTCGTCGCCAACTTCGTCCTCCTGTACCTGCTGATCAGCT
TCACAGCGGCCGTGTTCGCCAGCGCTACATCCGGCGTGGTGGGAAAGCAG
GGGAGGGGGAGGGTCGCCGCGGTGCAGCAGCGGAAGGAGCGGCTTGCCAA
GGCGGCCAGGGAGGCCAGAAACGCCGCGCCTCCAGTGCGCAACACTCTGC
ACTATTGTAACTGTGATGAAACGAACGAGTGTTTTGGTCAAGTTCATTCA
ACCGAGTCACAGGTTTCACTCTACGTCATCGTGGCGATGGTGTTTAAGGA
CGTCTTCGCAGGGAAAGCAAAGTCACTCATCAGCCAAGAGCTGGCCAAAG
ACAACCGCAGCTTCGTGGACCTGTCCAGTGTCGCCTTCTGGAGTGAGCAG
CTCACCGCCGCCGTTTCCATGGTGATCTGGTTCAACCTGGTGAAGATCTG
CAGCCTGTTGAGGGTCAGCTCACGGGTCCGTATGTATCTCGATGTCCTGA
TAAAGATTCGCACGAGGCTGCTCGGAAGCCTGATCATCTACGTTCTGATT
GTCACAGGCTTCAGTATGTCAGGGCATCTCCTGTTCGTCCCTTACGTCGC
AGCTTTCCAGTCCCTGGGCCGTGCCGTGGCCAGCCTGACGTTCTTACCGT
GGGAGGATGACGTCAGCTATGACGTGCTCGTCACAGCCAATGAGATTGTT
GGACCGCTGTTCCTCTTCGTCGCCAACTTCGTCCTCCTGTACCTGCTGAT
CAGCTTCACAGCGGCCGTGTTCGCCAGCGCTACATCCGGCGTGGTGGGAA
AGCAGGGGAGGGGGAGGGTCGCCGCGGTGCAGCAGCGGAAGGAGCGGCTT
GCCAAGGCGGCCAGGGAGGCCAGAAACGCCGCGCCTCCAGTGCGCAACAC
TCTGCACTATTGTAACTGTGATGAAACGAACGAGTGTTTTGGTCAAGTTC
ATTCAACCGAGTCACAGGTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000216 | genome | Sc0000216:435080..437413 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96330_cuf0 |
| Biotype | protein_coding |
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