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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96324_cuf12 >transcript:BL96324_cuf12-protein ID=transcript:BL96324_cuf12-protein|Name=transcript:BL96324_cuf12|organism=Branchiostoma lanceolatum|type=polypeptide|length=326bp
VTAEPPAVEINLKTAVQMVRIGERVEFDCSASGQPRPLIEWTKIDGRLPD NAEVRDGVLTIPAVRPGDEGRYQCQATNQFGSENQEVTLSLEAAPTMTVK PEVRNVMLGSTAVFTCLASGSPPPEITWRKENGDLPDDHMIDNGVLTIPS ITKEDAGAYICSARNDEGAAEFRAILNVGELIPYFTQTPLSYMTFPTLRE AYLQFDIEVSFKPESTEGLILYNGQKNGGAGDFMSLGLSEGYVEFRFDVG SGAAVIRSKNALELGRFHTVVLKRNSRFGSLSVDGLPAVNGTSQGNFRGL DLIEPLHVGGVPDYAAISTASGLKSG Run BLAST on NCBI mRNA from alignment at Sc0000020:90461..94886+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96324_cuf12 ID=transcript:BL96324_cuf12|Name=transcript:BL96324_cuf12|organism=Branchiostoma lanceolatum|type=mRNA|length=4426bp|location=Sequence derived from alignment at Sc0000020:90461..94886+ (Branchiostoma lanceolatum) GTTACAGCAGAGCCCCCTGCAGTAGAAATCAATCTAAAGACAGCAGTGCA
GATGGTGCGTATAGGAGAAAGGGTGGAGTTTGACTGCTCAGCTTCTGGGC
AGCCCAGGCCTCTGATAGAGTGGACAAAGGTATTTGTTGTATTTTTCTTT
GTACTCAAACAAAATTGTGTTAGGGTAGGTGTGTTCTAGTCTGTGATGCG
GGGGTTAGGTGTGTTCTAGTCTTATCATACTTTTAGCAGACCATTTTAAG
CACTAAAAACTGCTGGTTCCCTCTCTGTCTCCCAATGGGCTCTATGGATT
AACAATTTCATGGTAGCTTTGCATGTCAATCAGTTTTCATGCTGTCCCAG
TGTCTGGTAGGACTAAAAAAAGCAACTGTAACACAGTAGCATGTGTCTGT
AATTACCAGGGAAACAAGGGGTCCTTTGTGCGTACAGCTGAAAAAGAGGG
CGTCCAATTTCCTTGTGATTTTAGTATCATGCATCCAAAAGACGCATGAA
CGCATGCCTAGCTAAAAGCCTGCCCTTACCACATGTAATGCTAAAGGTTA
AACACGTTTGCCCGTCCTGCCAGATTGATGGGAGACTACCCGACAACGCG
GAGGTTCGAGACGGCGTCCTGACGATCCCAGCGGTAAGGCCCGGAGACGA
GGGTCGGTACCAGTGTCAGGCCACCAACCAGTTTGGGTCAGAGAACCAAG
AAGTGACTCTCAGTCTTGAAGGTAAGAGTTCACTGTGGATCAAACTTCAT
GGTTACTGTAAATGCAGAAATGTTTGCGGTGGTTTTATGTTCGCGTTTTT
CGCAGCGACCGTTTCACCACTGCGAACATTTTTGTCCAATACTGTAGCAG
TATGTGACTATAGCGCTGTATTTGATATCTATGCACAGTAGTAATGTAAT
GTTACATCGATGAAGGTTAGACATCCAGGTAGTAAGATATGCCAAAATAG
TAACTCAAGCAACTGGATAAAATTTTGAAAATTTGGTGCTTGAGTAACTA
TTTTGGCGTAATGTAATGTTATTGATGTTTATACAGTACATTGTATATGG
ATGTATGGAAGTAAAATCAATTTCAGTTTTAAAATCACACTACTTTGTTT
TTAGCTAAAGGGTATACTGTTTATCCAACTACTGGAACATAGTTTTTGAT
ATATTGCCCCCCTCCCACTCTAGCTGCGCCGACCATGACAGTAAAACCAG
AGGTGCGTAATGTGATGCTGGGCTCCACAGCTGTCTTCACCTGCTTGGCA
AGTGGGTCCCCGCCACCTGAAATCACCTGGAGGAAGGAGAATGGCGACCT
TCCTGATGACCACATGATCGATAACGGGGTCCTGACAATTCCTTCTGTAA
GTGATCCTTTAAGAAGTGACTATATCTTGTAGTGATCTATTCAATTTAAG
GTCTCATTCATAAGTTTTTTCTTCCCATAGACTTCTATGTTATAACACAT
GTTTTATATGGGCGCTTTTATAATGAAGCTTTAGGAAATGCACCAAGGTC
ATTCATTCTATGTTGAGCTCATTTACCCTAGATCATGTAAAAAAAATCTG
CCAAGAACTTCACTACATACAATCTCTGTTTATGGCTATTACAAACTGCA
CTTAGCTACACCCAACAAAAGGCACTTTCCAGCTGCAAGCGTACAACCGC
ACCACCCAAATCCCAGAACTGTGCATGTCCGAAAATGCGCAGCTGCTGAA
ATCTGATTGCTAATTTCTTCAGTTACAAACAAGCTTTCATCAGTTTGATG
CTTGAGATCAGTTAAACTCGCCAAAAGGGAATTTCCCACCCCCATAAACA
CGAGTTCATGCAGCTATTGATTTCTTGGGTAGGAAGTGATACATCAATGA
GACCTTAAACCCTCAGTGGTGGAATAATGACAAGATTGTCACTAGATAAA
GCACCGTGGATAAAGAATGAACGAGACGTAGATTTCATTTGCCACATCCT
TGATGTATTAAATTGAATAGCTGTGAGTTGATTTTTGACACCAATTTCTT
CTTTATTAATCTGTCTCTGAGTTTGTTCCCTAGCTTAAGAGCTTAAGACT
GTAAATGCAGAAATGTGGTTTAGTGTTTTTGGTTTTCGCGGCAACCGTTT
CACCGCGAACTTTAAACCACCACAAACATTTTTGTCCAATACTGTAGCAG
TATGTGACCATAGCGCTGCCGTAAACTTAGAACCACTGCAAACACTCCAT
TTTTGCTTTAGCGCGAAATAAAAGCCACGCAAACTTTAAATGTATTTACA
GTATTACAACAGCTCTTATGTTACAGTTACTGTAGTACATGTATGAAGTT
GTGTGCATGGATAACAGAATACTTGCATGTACTCAATGAGTATTTTGTAT
TGAGTTGTAATTATAATACTTTATGTCATCATACAGATCACAAAGGAAGA
CGCAGGTGCTTACATCTGTTCAGCCAGGAATGACGAAGGAGCGGCTGAGT
TCCGTGCCATTCTGAATGTCGGAGAGTTGATCCCATACTTCACCCAGACT
CCCCTGTCCTACATGACCTTCCCCACACTCCGCGAGGCCTACCTACAGTT
TGACATTGAAGTGTCCTTCAAACCGGAAAGCACTGAAGGTAAAGAGATTA
TCTTTCTCAAACATTTGAAATCGAAATGACGTATTAGCCATAAGGTAGTA
ACTTGTAAGTTTATTTTTTGTAACATAAAGCTAAATATTCCCCATTTTAA
GTATTCGATTATTCAATGTATTCAACAAACAGAAAGAAGGCACCTACATG
TAGTGCTGTAACGTTAATAGTTGACTTGAGGTCGTCCACTGCTTTTTGCC
TCAAGGTTCTACTCTTGCTCAAACTTTTCAATAGCTGTGGCAGAGAGAGG
AATGAAAATATTGTTCAGTACGTGTAAATACCTCTGAAAAGGTAAAAATG
ACAGTAAAAAGACGCCAGCTTTTCACTGAATTAAATGTATTTTCTTTCCA
CGAAAATCTCAAATCGCAAATAGATATATTAATATCATTATCTAAAAAGG
GAAACTCTTAGCTTCGCCCGGGAGAGTTTACCCTGTGGATGAACTGGGAT
GAACTGGTTTGGGGGATCCCCGTGGCATCGACCGCATGGTTTGTTGTCGA
GCGCTGATTGGCTGTTCGGGCCAAGAGACGCGGTGATAATGTCTTCGCCC
CTTTCCTCTCAAAGTGGGAAACCTTTTTCGGCTACACTATATTATCTTCG
CCGATACGTCTGGCCTAAATTCTTATTTCTCTTGTCGTAGGGTTGATTCT
GTACAATGGTCAGAAGAACGGAGGCGCAGGTGACTTCATGTCGCTGGGAC
TGTCGGAGGGGTATGTGGAGTTCCGCTTCGACGTGGGGTCGGGAGCTGCC
GTCATCCGCAGCAAGAACGCACTGGAGCTGGGGAGGTTTCATACTGTAGT
GCTGAAGAGGTACGGCATGAGGTTTATTGAGCTATGCTTTGGGTACTTCA
GGTGAAGAAATACACAGCGTGAGTTTCATCACCACACGCGGTGTTGGCAC
AAGCATGTTGACCACCTCAATTGCGCTCAAGAAATATGTGTCAAGCCTTG
TTGTGGAGAGGAAACGCATGCCAAATATGTGACGTGTCGAAATTCACGTC
GTGTTTTTCTTCACATTTGGGTCAACCTAATCTATATACCTGGTTTATCA
CCTAGTAATGTTACAGAGTATGATGGATGTTGCTAATGCCACTTTCTCAG
TCGTACATGTACAATCACAGGGACGGGGATGGTACATGTATGTCATTTTA
TATCATACCGGGGCCGCGATAACCTTTGATATGGGTATTCGGACCGATAC
GTACTTTACAGGCTTCCCTAGTTCGATTTAAATGATTCGAACTTGCTTTG
AGTGCGCCGGTTGTGTCCCTGTCAAAAATTTGAATACTGGATTCAGACGT
TGGAATTTGATGTCGTTACAAAGTATTTTGTTCGAGGACACAAAACTCTC
TTTATTTCTAGCACATTTCGCATTGAATGTGTGTTCTTTGTGTGGGTATG
ACATAAAAAAAGTGCAACATGGTGTATGTCAGTATTCCGCATCACCATCG
ATCCCAGCCCTCCCTCGGGTATACGGAATACACCGTACGCGTGTTGTATT
CTAATATATATCATTATGACAGTTGATGTAAAGGTCAAGGTGTAGTCAAG
AGATGAAAATTTATAAAATCTGTTACTTAGTGTTTTTATACTGACTGTCT
TAACAACTACCAATACTGCATGTATGAAGCACAGTAGTCACAAAAATTCT
GTTGTTTTTGTGCAAACAGGAACAGCAGGTTTGGTTCCCTGTCTGTGGAC
GGTCTCCCGGCCGTTAACGGTACGTCTCAGGGCAACTTCCGCGGTCTGGA
CCTGATCGAACCCCTGCACGTGGGCGGAGTTCCCGACTACGCTGCCATAT
CAACGGCTTCTGGGTTAAAATCTGGC Coding sequence (CDS) from alignment at Sc0000020:90461..94886+ >transcript:BL96324_cuf12 ID=transcript:BL96324_cuf12|Name=transcript:BL96324_cuf12|organism=Branchiostoma lanceolatum|type=CDS|length=5868bp|location=Sequence derived from alignment at Sc0000020:90461..94886+ (Branchiostoma lanceolatum) GTTACAGCAGAGCCCCCTGCAGTAGAAATCAATCTAAAGACAGCAGTGCA GATGGTGCGTATAGGAGAAAGGGTGGAGTTTGACTGCTCAGCTTCTGGGC AGCCCAGGCCTCTGATAGAGTGGACAAAGATTGATGGGAGACTACCCGAC AACGCGGAGGTTCGAGACGGCGTCCTGACGATCCCAGCGGTAAGGCCCGG AGACGAGGGTCGGTACCAGTGTCAGGCCACCAACCAGTTTGGGTCAGAGA ACCAAGAAGTGACTCTCAGTCTTGAAGCTGCGCCGACCATGACAGTAAAA CCAGAGGTGCGTAATGTGATGCTGGGCTCCACAGCTGTCTTCACCTGCTT GGCAAGTGGGTCCCCGCCACCTGAAATCACCTGGAGGAAGGAGAATGGCG ACCTTCCTGATGACCACATGATCGATAACGGGGTCCTGACAATTCCTTCT ATCACAAAGGAAGACGCAGGTGCTTACATCTGTTCAGCCAGGAATGACGA AGGAGCGGCTGAGTTCCGTGCCATTCTGAATGTCGGAGAGTTGATCCCAT ACTTCACCCAGACTCCCCTGTCCTACATGACCTTCCCCACACTCCGCGAG GCCTACCTACAGTTTGACATTGAAGTGTCCTTCAAACCGGAAAGCACTGA AGGGTTGATTCTGTACAATGGTCAGAAGAACGGAGGCGCAGGTGACTTCA TGTCGCTGGGACTGTCGGAGGGGTATGTGGAGTTCCGCTTCGACGTGGGG TCGGGAGCTGCCGTCATCCGCAGCAAGAACGCACTGGAGCTGGGGAGGTT TCATACTGTAGTGCTGAAGAGGAACAGCAGGTTTGGTTCCCTGTCTGTGG ACGGTCTCCCGGCCGTTAACGGTACGTCTCAGGGCAACTTCCGCGGTCTG GACCTGATCGAACCCCTGCACGTGGGCGGAGTTCCCGACTACGCTGCCAT ATCAACGGCTTCTGGGTTAAAATCTGGCGTTACAGCAGAGCCCCCTGCAG TAGAAATCAATCTAAAGACAGCAGTGCAGATGGTGCGTATAGGAGAAAGG GTGGAGTTTGACTGCTCAGCTTCTGGGCAGCCCAGGCCTCTGATAGAGTG GACAAAGATTGATGGGAGACTACCCGACAACGCGGAGGTTCGAGACGGCG TCCTGACGATCCCAGCGGTAAGGCCCGGAGACGAGGGTCGGTACCAGTGT CAGGCCACCAACCAGTTTGGGTCAGAGAACCAAGAAGTGACTCTCAGTCT TGAAGCTGCGCCGACCATGACAGTAAAACCAGAGGTGCGTAATGTGATGC TGGGCTCCACAGCTGTCTTCACCTGCTTGGCAAGTGGGTCCCCGCCACCT GAAATCACCTGGAGGAAGGAGAATGGCGACCTTCCTGATGACCACATGAT CGATAACGGGGTCCTGACAATTCCTTCTATCACAAAGGAAGACGCAGGTG CTTACATCTGTTCAGCCAGGAATGACGAAGGAGCGGCTGAGTTCCGTGCC ATTCTGAATGTCGGAGAGTTGATCCCATACTTCACCCAGACTCCCCTGTC CTACATGACCTTCCCCACACTCCGCGAGGCCTACCTACAGTTTGACATTG AAGTGTCCTTCAAACCGGAAAGCACTGAAGGGTTGATTCTGTACAATGGT CAGAAGAACGGAGGCGCAGGTGACTTCATGTCGCTGGGACTGTCGGAGGG GTATGTGGAGTTCCGCTTCGACGTGGGGTCGGGAGCTGCCGTCATCCGCA GCAAGAACGCACTGGAGCTGGGGAGGTTTCATACTGTAGTGCTGAAGAGG AACAGCAGGTTTGGTTCCCTGTCTGTGGACGGTCTCCCGGCCGTTAACGG TACGTCTCAGGGCAACTTCCGCGGTCTGGACCTGATCGAACCCCTGCACG TGGGCGGAGTTCCCGACTACGCTGCCATATCAACGGCTTCTGGGTTAAAA TCTGGCGTTACAGCAGAGCCCCCTGCAGTAGAAATCAATCTAAAGACAGC AGTGCAGATGGTGCGTATAGGAGAAAGGGTGGAGTTTGACTGCTCAGCTT CTGGGCAGCCCAGGCCTCTGATAGAGTGGACAAAGATTGATGGGAGACTA CCCGACAACGCGGAGGTTCGAGACGGCGTCCTGACGATCCCAGCGGTAAG GCCCGGAGACGAGGGTCGGTACCAGTGTCAGGCCACCAACCAGTTTGGGT CAGAGAACCAAGAAGTGACTCTCAGTCTTGAAGCTGCGCCGACCATGACA GTAAAACCAGAGGTGCGTAATGTGATGCTGGGCTCCACAGCTGTCTTCAC CTGCTTGGCAAGTGGGTCCCCGCCACCTGAAATCACCTGGAGGAAGGAGA ATGGCGACCTTCCTGATGACCACATGATCGATAACGGGGTCCTGACAATT CCTTCTATCACAAAGGAAGACGCAGGTGCTTACATCTGTTCAGCCAGGAA TGACGAAGGAGCGGCTGAGTTCCGTGCCATTCTGAATGTCGGAGAGTTGA TCCCATACTTCACCCAGACTCCCCTGTCCTACATGACCTTCCCCACACTC CGCGAGGCCTACCTACAGTTTGACATTGAAGTGTCCTTCAAACCGGAAAG CACTGAAGGGTTGATTCTGTACAATGGTCAGAAGAACGGAGGCGCAGGTG ACTTCATGTCGCTGGGACTGTCGGAGGGGTATGTGGAGTTCCGCTTCGAC GTGGGGTCGGGAGCTGCCGTCATCCGCAGCAAGAACGCACTGGAGCTGGG GAGGTTTCATACTGTAGTGCTGAAGAGGAACAGCAGGTTTGGTTCCCTGT CTGTGGACGGTCTCCCGGCCGTTAACGGTACGTCTCAGGGCAACTTCCGC GGTCTGGACCTGATCGAACCCCTGCACGTGGGCGGAGTTCCCGACTACGC TGCCATATCAACGGCTTCTGGGTTAAAATCTGGCGTTACAGCAGAGCCCC CTGCAGTAGAAATCAATCTAAAGACAGCAGTGCAGATGGTGCGTATAGGA GAAAGGGTGGAGTTTGACTGCTCAGCTTCTGGGCAGCCCAGGCCTCTGAT AGAGTGGACAAAGATTGATGGGAGACTACCCGACAACGCGGAGGTTCGAG ACGGCGTCCTGACGATCCCAGCGGTAAGGCCCGGAGACGAGGGTCGGTAC CAGTGTCAGGCCACCAACCAGTTTGGGTCAGAGAACCAAGAAGTGACTCT CAGTCTTGAAGCTGCGCCGACCATGACAGTAAAACCAGAGGTGCGTAATG TGATGCTGGGCTCCACAGCTGTCTTCACCTGCTTGGCAAGTGGGTCCCCG CCACCTGAAATCACCTGGAGGAAGGAGAATGGCGACCTTCCTGATGACCA CATGATCGATAACGGGGTCCTGACAATTCCTTCTATCACAAAGGAAGACG CAGGTGCTTACATCTGTTCAGCCAGGAATGACGAAGGAGCGGCTGAGTTC CGTGCCATTCTGAATGTCGGAGAGTTGATCCCATACTTCACCCAGACTCC CCTGTCCTACATGACCTTCCCCACACTCCGCGAGGCCTACCTACAGTTTG ACATTGAAGTGTCCTTCAAACCGGAAAGCACTGAAGGGTTGATTCTGTAC AATGGTCAGAAGAACGGAGGCGCAGGTGACTTCATGTCGCTGGGACTGTC GGAGGGGTATGTGGAGTTCCGCTTCGACGTGGGGTCGGGAGCTGCCGTCA TCCGCAGCAAGAACGCACTGGAGCTGGGGAGGTTTCATACTGTAGTGCTG AAGAGGAACAGCAGGTTTGGTTCCCTGTCTGTGGACGGTCTCCCGGCCGT TAACGGTACGTCTCAGGGCAACTTCCGCGGTCTGGACCTGATCGAACCCC TGCACGTGGGCGGAGTTCCCGACTACGCTGCCATATCAACGGCTTCTGGG TTAAAATCTGGCGTTACAGCAGAGCCCCCTGCAGTAGAAATCAATCTAAA GACAGCAGTGCAGATGGTGCGTATAGGAGAAAGGGTGGAGTTTGACTGCT CAGCTTCTGGGCAGCCCAGGCCTCTGATAGAGTGGACAAAGATTGATGGG AGACTACCCGACAACGCGGAGGTTCGAGACGGCGTCCTGACGATCCCAGC GGTAAGGCCCGGAGACGAGGGTCGGTACCAGTGTCAGGCCACCAACCAGT TTGGGTCAGAGAACCAAGAAGTGACTCTCAGTCTTGAAGCTGCGCCGACC ATGACAGTAAAACCAGAGGTGCGTAATGTGATGCTGGGCTCCACAGCTGT CTTCACCTGCTTGGCAAGTGGGTCCCCGCCACCTGAAATCACCTGGAGGA AGGAGAATGGCGACCTTCCTGATGACCACATGATCGATAACGGGGTCCTG ACAATTCCTTCTATCACAAAGGAAGACGCAGGTGCTTACATCTGTTCAGC CAGGAATGACGAAGGAGCGGCTGAGTTCCGTGCCATTCTGAATGTCGGAG AGTTGATCCCATACTTCACCCAGACTCCCCTGTCCTACATGACCTTCCCC ACACTCCGCGAGGCCTACCTACAGTTTGACATTGAAGTGTCCTTCAAACC GGAAAGCACTGAAGGGTTGATTCTGTACAATGGTCAGAAGAACGGAGGCG CAGGTGACTTCATGTCGCTGGGACTGTCGGAGGGGTATGTGGAGTTCCGC TTCGACGTGGGGTCGGGAGCTGCCGTCATCCGCAGCAAGAACGCACTGGA GCTGGGGAGGTTTCATACTGTAGTGCTGAAGAGGAACAGCAGGTTTGGTT CCCTGTCTGTGGACGGTCTCCCGGCCGTTAACGGTACGTCTCAGGGCAAC TTCCGCGGTCTGGACCTGATCGAACCCCTGCACGTGGGCGGAGTTCCCGA CTACGCTGCCATATCAACGGCTTCTGGGTTAAAATCTGGCGTTACAGCAG AGCCCCCTGCAGTAGAAATCAATCTAAAGACAGCAGTGCAGATGGTGCGT ATAGGAGAAAGGGTGGAGTTTGACTGCTCAGCTTCTGGGCAGCCCAGGCC TCTGATAGAGTGGACAAAGATTGATGGGAGACTACCCGACAACGCGGAGG TTCGAGACGGCGTCCTGACGATCCCAGCGGTAAGGCCCGGAGACGAGGGT CGGTACCAGTGTCAGGCCACCAACCAGTTTGGGTCAGAGAACCAAGAAGT GACTCTCAGTCTTGAAGCTGCGCCGACCATGACAGTAAAACCAGAGGTGC GTAATGTGATGCTGGGCTCCACAGCTGTCTTCACCTGCTTGGCAAGTGGG TCCCCGCCACCTGAAATCACCTGGAGGAAGGAGAATGGCGACCTTCCTGA TGACCACATGATCGATAACGGGGTCCTGACAATTCCTTCTATCACAAAGG AAGACGCAGGTGCTTACATCTGTTCAGCCAGGAATGACGAAGGAGCGGCT GAGTTCCGTGCCATTCTGAATGTCGGAGAGTTGATCCCATACTTCACCCA GACTCCCCTGTCCTACATGACCTTCCCCACACTCCGCGAGGCCTACCTAC AGTTTGACATTGAAGTGTCCTTCAAACCGGAAAGCACTGAAGGGTTGATT CTGTACAATGGTCAGAAGAACGGAGGCGCAGGTGACTTCATGTCGCTGGG ACTGTCGGAGGGGTATGTGGAGTTCCGCTTCGACGTGGGGTCGGGAGCTG CCGTCATCCGCAGCAAGAACGCACTGGAGCTGGGGAGGTTTCATACTGTA GTGCTGAAGAGGAACAGCAGGTTTGGTTCCCTGTCTGTGGACGGTCTCCC GGCCGTTAACGGTACGTCTCAGGGCAACTTCCGCGGTCTGGACCTGATCG AACCCCTGCACGTGGGCGGAGTTCCCGACTACGCTGCCATATCAACGGCT TCTGGGTTAAAATCTGGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000020 | genome | Sc0000020:90461..94886 + |
Properties
Property Name | Value |
Transcript id | BL96324_cuf12 |
Biotype | protein_coding |
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