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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96273_cuf1 >transcript:BL96273_cuf1-protein ID=transcript:BL96273_cuf1-protein|Name=transcript:BL96273_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=164bp
MTVTFPRAALRGVNVADLTLLDPSCRPTLTDAEVIFRAGLQTCGTIQDSS
EDDKFIFTNEAIGGQVTSDNGAVRGTPFRKRFQCEFLRQYVLSQGREILY
NIPSPRVQVVDANNSFTFEMHIFTSADFTATYNSPDYPLRVCYFLFVFDK
ATQIPAFSLSSSCS Run BLAST on NCBI mRNA from alignment at xfSc0000015:17480..19610- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96273_cuf1 ID=transcript:BL96273_cuf1|Name=transcript:BL96273_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2131bp|location=Sequence derived from alignment at xfSc0000015:17480..19610- (Branchiostoma lanceolatum)
CCCCGGGCGACGCCGCGGCCACCGTGCCCCGCCTGTGGGCGCACACCGAG
TACACCCTCACCCTGACGGCGTTCGGGGAGGACGGCCAGGAGCTCGGGGA
GATCAGCGGGACGGAGACAACAGGTTAGTCGGTGCAAGGACGGGAACTGA
GGCAGGCTTAGGTCTTGACTGAAGAAAGGCTACAGTCTCCTTTGTCCTGA
TATAGATATAATGTGTGATATAGCCAGATCCTTCCGCACAGCATGCCTGT
GAAACTGGACAGGTATGTTAGGCCGGAGGGCGGTAATACCGGCCATACGG
AACTGATACAGATACAGAAAATGAAATGAATTTATCATAAATGGTTTATT
GAGCAAAGATGAAATCCAATATTTGCAGCTTGAAAGGCTGAATTCAGGTT
AGGATTTTACAAGGAGTTAAGATCATTGTGTGAACACTGATTTAGAGGTA
AGACTTTACACAGTGTTTCTGGCATGGATTCAAGACCTGGTCTTTTACTA
ACTTTGTTTGCAGGACATCCAGAATTGGTTTGTGCACATGTGAATGTTAG
GCACATCATATGCTCCGTGTGGTGTCGCGGTGGCGCAGAACTCTGAGGTC
CTGTGTTCGGATCTGGGGTCCCTTGATTTGTCCGGTTGACGTCTGCCCTT
GGGAAAGGTATGCACTTTACACGACTTTCCTCACTTCTCTCAGATGAAAA
GGATGGTTTGAGGTGAGCCACACCTCGATCATGTAAAAGAACCCATCACA
CGTATGGAAAAGAATATAGGGGTCCTTCCTGGTGTGAGTGGATCACAAAA
TTAGAATCTGTCTGGATATGCAGCCTGTACTCTTCAGTGCAAACCTGGTG
TGCTACGCCTTGAGGCGGTTTGCCGGGCATGCAATACAAACAAGTCTGAT
GCATGTGAACCTTTTCCAGCGGAGGTTATCGTGAACGTGGAGTGCCACCA
GGACCACATGACCGTGACGTTCCCCAGAGCGGCGCTGCGGGGGGTGAATG
TGGCAGATCTGACCCTGCTGGACCCCAGCTGCCGTCCGACGCTCACCGAC
GCCGAGGTGATTTTCCGCGCCGGGCTGCAAACCTGCGGGACGATCCAGGA
TGTAAGTAGACGTCTGGAAAATGAAGAATGGACACAGGCAAAACAAGAGT
AGATGGGGTTGGCGGAAAAATATATCCAGTATGAAAAGAGGGTCTGCATG
GGGGTTCCTGGCAACACATAACTCTAGATTCAGCAGGGTTGGCAACCTTT
AACGGTAAAGTCAGGAGGACCTGCTCTCCAAGAAAATCTTGTCGCTAAAT
CCTTCGTTGGGCTCTTTGATTGGTTAGCAAGTTTCTTTGCATTTCTCCGT
TTTCACAGTCGTCCGAAGATGACAAATTCATCTTCACCAACGAGGCCATC
GGCGGTCAGGTGACGTCTGACAACGGAGCCGTGCGAGGAACGCCCTTCAG
GAAGAGGTTCCAGTGTGAGTTCCTCCGTCAGTACGTGCTCTCACAGGGAC
GGGAGATCCTCTACAACATCCCGTCTCCTCGGTAAGACCTGTCAGATGTG
CCCAGTATAGCTAGCACACCTGCGTCTGAACTGGAATCTTGTGATAACCT
CACTATGCGTACAAATCGTAATCTCTGAATGTCTAATTAGCACAAACTGA
ATGCTTTCTAGTCAGCTATCTCTATTATATATGAAATGTCACGTCATTGT
GTTGTAGTGGTTAGAGCGTTGGGCTCAGGACTAATAGGTTCCGGGTACTG
TTGTGCCCTATTTGGGAAAGGCGGTAATCCCATGCTCAGCTTCCAGTAGA
CCTCGCATCGCAGATAAAATTTAGAAAATGTGCGAATACTAAGATATTGA
TTGGAGTCTGAGCTCCAGGATTCGTCTTTACATTTACTCTGAATGTGTGA
TTAGCATATATGATGAATAATTCCTCATCAGCTATCTGTATCTGGTTGTT
TACAGGGTGCAAGTTGTGGACGCGAACAACAGTTTCACCTTCGAGATGCA
CATTTTTACGTCTGCAGACTTCACTGCGACGTACAATTCTCCCGACTACC
CTTTGCGGGTGTGTTACTTTTTGTTTGTTTTTGACAAGGCTACCCAAATA
CCTGCTTTTTCATTGTCTTCATCATGTTCAA Coding sequence (CDS) from alignment at xfSc0000015:17480..19610- >transcript:BL96273_cuf1 ID=transcript:BL96273_cuf1|Name=transcript:BL96273_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1476bp|location=Sequence derived from alignment at xfSc0000015:17480..19610- (Branchiostoma lanceolatum)
ATGACCGTGACGTTCCCCAGAGCGGCGCTGCGGGGGGTGAATGTGGCAGA
TCTGACCCTGCTGGACCCCAGCTGCCGTCCGACGCTCACCGACGCCGAGG
TGATTTTCCGCGCCGGGCTGCAAACCTGCGGGACGATCCAGGATTCGTCC
GAAGATGACAAATTCATCTTCACCAACGAGGCCATCGGCGGTCAGGTGAC
GTCTGACAACGGAGCCGTGCGAGGAACGCCCTTCAGGAAGAGGTTCCAGT
GTGAGTTCCTCCGTCAGTACGTGCTCTCACAGGGACGGGAGATCCTCTAC
AACATCCCGTCTCCTCGGGTGCAAGTTGTGGACGCGAACAACAGTTTCAC
CTTCGAGATGCACATTTTTACGTCTGCAGACTTCACTGCGACGTACAATT
CTCCCGACTACCCTTTGCGGGTGTGTTACTTTTTGTTTGTTTTTGACAAG
GCTACCCAAATACCTGCTTTTTCATTGTCTTCATCATGTTCAATGACCGT
GACGTTCCCCAGAGCGGCGCTGCGGGGGGTGAATGTGGCAGATCTGACCC
TGCTGGACCCCAGCTGCCGTCCGACGCTCACCGACGCCGAGGTGATTTTC
CGCGCCGGGCTGCAAACCTGCGGGACGATCCAGGATTCGTCCGAAGATGA
CAAATTCATCTTCACCAACGAGGCCATCGGCGGTCAGGTGACGTCTGACA
ACGGAGCCGTGCGAGGAACGCCCTTCAGGAAGAGGTTCCAGTGTGAGTTC
CTCCGTCAGTACGTGCTCTCACAGGGACGGGAGATCCTCTACAACATCCC
GTCTCCTCGGGTGCAAGTTGTGGACGCGAACAACAGTTTCACCTTCGAGA
TGCACATTTTTACGTCTGCAGACTTCACTGCGACGTACAATTCTCCCGAC
TACCCTTTGCGGGTGTGTTACTTTTTGTTTGTTTTTGACAAGGCTACCCA
AATACCTGCTTTTTCATTGTCTTCATCATGTTCAATGACCGTGACGTTCC
CCAGAGCGGCGCTGCGGGGGGTGAATGTGGCAGATCTGACCCTGCTGGAC
CCCAGCTGCCGTCCGACGCTCACCGACGCCGAGGTGATTTTCCGCGCCGG
GCTGCAAACCTGCGGGACGATCCAGGATTCGTCCGAAGATGACAAATTCA
TCTTCACCAACGAGGCCATCGGCGGTCAGGTGACGTCTGACAACGGAGCC
GTGCGAGGAACGCCCTTCAGGAAGAGGTTCCAGTGTGAGTTCCTCCGTCA
GTACGTGCTCTCACAGGGACGGGAGATCCTCTACAACATCCCGTCTCCTC
GGGTGCAAGTTGTGGACGCGAACAACAGTTTCACCTTCGAGATGCACATT
TTTACGTCTGCAGACTTCACTGCGACGTACAATTCTCCCGACTACCCTTT
GCGGGTGTGTTACTTTTTGTTTGTTTTTGACAAGGCTACCCAAATACCTG
CTTTTTCATTGTCTTCATCATGTTCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000015 | genome | xfSc0000015:17480..19610 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96273_cuf1 |
| Biotype | protein_coding |
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