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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96270_cuf0 >transcript:BL96270_cuf0-protein ID=transcript:BL96270_cuf0-protein|Name=transcript:BL96270_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=206bp
DKMPQSEDTVNTVAAMLRLPPEVLKDIKEEFGGSRARLIEVLECWWLHHG
ASATDVWLRQVVATVTEGQGSCVRGQGQVQATVPGGQGSYVGGRGQVHAT
VPRGQDQTQRQQCEERQAVADMTALLRTNRVQLIEALGYLDSVLDHLFSR
SVITDEEMHHIKSHRVRFGQARELLDIIATKGEGACAEFKTVLAEVNPHA
ATFLET Run BLAST on NCBI mRNA from alignment at Sc0000136:729685..732435- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96270_cuf0 ID=transcript:BL96270_cuf0|Name=transcript:BL96270_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2751bp|location=Sequence derived from alignment at Sc0000136:729685..732435- (Branchiostoma lanceolatum)
GACAAGATGCCACAGTCAGAGGACACAGTCAACACGGTGGCTGCAATGCT
ACGACTCCCGCCAGAGGTCCTCAAAGACATCAAAGAGGAATTCGGAGGCA
GCCGGGCCAGGCTAATTGAGGTTTGTTCTCTATCTCACCCCTTCGTACCC
CCCTCCGCATTTGATGGAAAAAGTGTACCTTGACTCTTCCTTCCGTCACT
TCTCCATGGGGCAAAACACCTGAGCAGCTCATCACGCCTTCCTTTCCAGA
ATCCAAATTGTATATCCAAATGCATGCATGAGGAGTTAACATTCTGTTCT
ACATAACCTGGAATTCCTCATGACACCTTACTATCCTTCTTTATGGCACT
CACCTGTTTGATATATTTACAGGTTTGCGTAGCAAAACCTTTGTTGGATC
CGTTGGCATGTGTGGTGGCCGCCATCTTGAATTGTGGCGTCACAGGGTGG
CCATACCATTTTATTGGGAGGGGTGTTTTTTGGGGTCGCTAGCGTTCTCT
CTTTTTTTTAGCAAATCGGCACACAATAATCACCCATTCAACTCAAATAA
AAAGAAAAACAAGACAAATTCATATTTGTAAAAAGAGCCCGTAATCGCTA
AACTAACAAAGCAAACCTGAAGTATATGTAGCACAAATACTTAACTCTAG
TTGATATTTGATACATGCGTCTACAGGTCCTGGAGTGCTGGTGGCTGCAC
CACGGCGCGTCCGCTACTGACGTGTGGCTGCGGCAGGTGGTAGCAACGGT
GACTGAAGGTCAGGGGTCATGTGTGAGAGGTCAGGGGCAGGTGCAGGCCA
CCGTGCCAGGAGGTCAGGGGTCATATGTGGGAGGTCGGGGACAGGTGCAT
GCCACTGTCCCAAGAGGTCAGGGGTCATGTGTTAGAGATCAGGGGCAGGT
GCAGGCCCCCGTGCCAGGAGGTCAGGATCAAACACAGCGGCAACAGTGTG
AGGAGCGCCAGGCAGTAGCCGGTAAGTTAAATTGAGACACCTGAACTCAT
TCCCTAGGGGCTTACAGACCTTCTGACAATTTCCATCCGGACATGGCAAG
CCAGTTTGCTTCCCCCGCCAATAAAGGACAAGTGTTTTTGGTGTCTTCCC
TCAAGACATGAAAATGCTTTTGGTTTACTTTCCTCCAAGCTATGTCTGTT
CCCTACTCTCATAGACATGAATAACGTGTTTGCAACTCTTATAGACAAGA
CTAGCCTGTTTGCTACTTTCATAGAAATGACTTGCATGTTTGCTACTTTC
ATAGACATGCCTAGGCTGTTTGCTACTTCCATAGACATGACTAGAGTGTC
AATTGCTACTTCCATAGACATGACTAGAGTGTCAATTGCTACTTTCATAG
AAATGACTAACGTACTTGCTACTTTTATAGAAATGCCTAGCGTATTTGCT
ACCGTTTTATAGACATGACTAGCATGTTTGCTACTTTCATAGACATGAGT
AGCGTGTTACGTTTGCTACGTTCAAACACATGACTAGCCTGTATGCTACT
TTCATAGACATAACTAGCGTGTTTACTACTGTCATAGACATGACAACCCC
ATTTGCTACTATCATAGACATGACGTACGTGTTTGTTGCTTTCCCAGACA
TGACTGCGCTCCTGAGGACCAACCGCGTGCAGCTAATCGAGGCCCTGGGG
TACCTCGACTCCGTCTTGGACCACCTGTTTTCCCGAAGTGTCATCACTGA
TGAGGAGATGCACCATATCAAGTCACATCGTGTTCGGTTCGGTCAAGCAC
GGGAACTGCTCGACATCATCGCGACTAAAGGCGAGGGGGCGTGCGCAGAG
TTCAAGACCGTCCTGGCCGAGGTCAATCCACACGCAGCAACGTTCTTAGA
GACGTAAAAATGACCCTGTTGTCCTGTTCACCCCCAGATTGTTATGTAGC
ATTCAGCAACCAGGTACTAACAAGGCCTACGGAATTTATTGCATTTTGGC
GAAGCTTCAGGAGCAAGCCTTATAGTGTGGTATACGATCAGTTAAGAAAA
ATGCCAACTATTCCATAGGAATTTCTTCAGTATTTCTATAATGTCGCATG
GACACTATAACTAGAGAAGCTGACATCCCAGCTATGTCACCAGCGGACCG
ATCAGAGCGCATGCCCGGGGGCAGGTCTCACGAGACATGCGTCCTCGATT
TCGGCCGGTGAGTGTAACCGAATGAATTACACTTAAAACAATGGGCTCAC
AGAGCAGAAATAGCCTGGACCTGCGAGGTTTTTCAAGTGCTTTGTACAAA
TATTATGGAAGAATTATGAGCGCTACGTCGGTATTATTTTTGTTACATGA
AGTAAGATTAACCCAGACACCTTCGCCATGGCGATAATTAAGGTTTCATT
GCCACACTTGTTTGATTTAAATTATATTGTTCCTAATAGAGGTAAAATGC
CACTTTGTTTCCGGAAGTTTTGATGAATGCCACAGTTGAGGGTGAATTTG
GAATGTTTTCTTTGTATATTGACGCTCAAACACAACTTGTCAAATATTGG
CTAAGAGTACAAATCATACCTAATTATAGAATGTGATGTACATAATTATT
TTATACATTGGGACCATCATGGCCTTCTTCTTTTTTATATGGTCCCCGTT
TCCTATCAGTAAAATAGCAAAGATATCAGACTTGTTGTATAGAGCTCTTT
AGCAATTTTCGTGTATTTCATTTTTTCAGTTGTTGCGAAACAAAGTTTGA
TTGGTTCATTTAATATGTATTTCTTTATTGAGAGATTATATTTTTCTAAG
C Coding sequence (CDS) from alignment at Sc0000136:729685..732435- >transcript:BL96270_cuf0 ID=transcript:BL96270_cuf0|Name=transcript:BL96270_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2484bp|location=Sequence derived from alignment at Sc0000136:729685..732435- (Branchiostoma lanceolatum)
GACAAGATGCCACAGTCAGAGGACACAGTCAACACGGTGGCTGCAATGCT
ACGACTCCCGCCAGAGGTCCTCAAAGACATCAAAGAGGAATTCGGAGGCA
GCCGGGCCAGGCTAATTGAGGTCCTGGAGTGCTGGTGGCTGCACCACGGC
GCGTCCGCTACTGACGTGTGGCTGCGGCAGGTGGTAGCAACGGTGACTGA
AGGTCAGGGGTCATGTGTGAGAGGTCAGGGGCAGGTGCAGGCCACCGTGC
CAGGAGGTCAGGGGTCATATGTGGGAGGTCGGGGACAGGTGCATGCCACT
GTCCCAAGAGGTCAGGATCAAACACAGCGGCAACAGTGTGAGGAGCGCCA
GGCAGTAGCCGACATGACTGCGCTCCTGAGGACCAACCGCGTGCAGCTAA
TCGAGGCCCTGGGGTACCTCGACTCCGTCTTGGACCACCTGTTTTCCCGA
AGTGTCATCACTGATGAGGAGATGCACCATATCAAGTCACATCGTGTTCG
GTTCGGTCAAGCACGGGAACTGCTCGACATCATCGCGACTAAAGGCGAGG
GGGCGTGCGCAGAGTTCAAGACCGTCCTGGCCGAGGTCAATCCACACGCA
GCAACGTTCTTAGAGACGTAAGACAAGATGCCACAGTCAGAGGACACAGT
CAACACGGTGGCTGCAATGCTACGACTCCCGCCAGAGGTCCTCAAAGACA
TCAAAGAGGAATTCGGAGGCAGCCGGGCCAGGCTAATTGAGGTCCTGGAG
TGCTGGTGGCTGCACCACGGCGCGTCCGCTACTGACGTGTGGCTGCGGCA
GGTGGTAGCAACGGTGACTGAAGGTCAGGGGTCATGTGTGAGAGGTCAGG
GGCAGGTGCAGGCCACCGTGCCAGGAGGTCAGGGGTCATATGTGGGAGGT
CGGGGACAGGTGCATGCCACTGTCCCAAGAGGTCAGGATCAAACACAGCG
GCAACAGTGTGAGGAGCGCCAGGCAGTAGCCGACATGACTGCGCTCCTGA
GGACCAACCGCGTGCAGCTAATCGAGGCCCTGGGGTACCTCGACTCCGTC
TTGGACCACCTGTTTTCCCGAAGTGTCATCACTGATGAGGAGATGCACCA
TATCAAGTCACATCGTGTTCGGTTCGGTCAAGCACGGGAACTGCTCGACA
TCATCGCGACTAAAGGCGAGGGGGCGTGCGCAGAGTTCAAGACCGTCCTG
GCCGAGGTCAATCCACACGCAGCAACGTTCTTAGAGACGTAAGACAAGAT
GCCACAGTCAGAGGACACAGTCAACACGGTGGCTGCAATGCTACGACTCC
CGCCAGAGGTCCTCAAAGACATCAAAGAGGAATTCGGAGGCAGCCGGGCC
AGGCTAATTGAGGTCCTGGAGTGCTGGTGGCTGCACCACGGCGCGTCCGC
TACTGACGTGTGGCTGCGGCAGGTGGTAGCAACGGTGACTGAAGGTCAGG
GGTCATGTGTGAGAGGTCAGGGGCAGGTGCAGGCCACCGTGCCAGGAGGT
CAGGGGTCATATGTGGGAGGTCGGGGACAGGTGCATGCCACTGTCCCAAG
AGGTCAGGATCAAACACAGCGGCAACAGTGTGAGGAGCGCCAGGCAGTAG
CCGACATGACTGCGCTCCTGAGGACCAACCGCGTGCAGCTAATCGAGGCC
CTGGGGTACCTCGACTCCGTCTTGGACCACCTGTTTTCCCGAAGTGTCAT
CACTGATGAGGAGATGCACCATATCAAGTCACATCGTGTTCGGTTCGGTC
AAGCACGGGAACTGCTCGACATCATCGCGACTAAAGGCGAGGGGGCGTGC
GCAGAGTTCAAGACCGTCCTGGCCGAGGTCAATCCACACGCAGCAACGTT
CTTAGAGACGTAAGACAAGATGCCACAGTCAGAGGACACAGTCAACACGG
TGGCTGCAATGCTACGACTCCCGCCAGAGGTCCTCAAAGACATCAAAGAG
GAATTCGGAGGCAGCCGGGCCAGGCTAATTGAGGTCCTGGAGTGCTGGTG
GCTGCACCACGGCGCGTCCGCTACTGACGTGTGGCTGCGGCAGGTGGTAG
CAACGGTGACTGAAGGTCAGGGGTCATGTGTGAGAGGTCAGGGGCAGGTG
CAGGCCACCGTGCCAGGAGGTCAGGGGTCATATGTGGGAGGTCGGGGACA
GGTGCATGCCACTGTCCCAAGAGGTCAGGATCAAACACAGCGGCAACAGT
GTGAGGAGCGCCAGGCAGTAGCCGACATGACTGCGCTCCTGAGGACCAAC
CGCGTGCAGCTAATCGAGGCCCTGGGGTACCTCGACTCCGTCTTGGACCA
CCTGTTTTCCCGAAGTGTCATCACTGATGAGGAGATGCACCATATCAAGT
CACATCGTGTTCGGTTCGGTCAAGCACGGGAACTGCTCGACATCATCGCG
ACTAAAGGCGAGGGGGCGTGCGCAGAGTTCAAGACCGTCCTGGCCGAGGT
CAATCCACACGCAGCAACGTTCTTAGAGACGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000136 | genome | Sc0000136:729685..732435 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96270_cuf0 |
| Biotype | protein_coding |
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