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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96246_cuf0 >transcript:BL96246_cuf0-protein ID=transcript:BL96246_cuf0-protein|Name=transcript:BL96246_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=135bp
RTQCFLRQFASIRPSVLLGQPKQMAAKSDDPSDRDGQGDAKRLNCIKRCS
NVLVSVLEGFFYRLGKLVSEHPWLTILLTLLFSGYLSVGMVKFQEERRDE
KLWVPYGSQVIVHRNWINEKFPAKFRFQFLLIEAD Run BLAST on NCBI mRNA from alignment at Sc0000051:1434505..1436754+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96246_cuf0 ID=transcript:BL96246_cuf0|Name=transcript:BL96246_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2250bp|location=Sequence derived from alignment at Sc0000051:1434505..1436754+ (Branchiostoma lanceolatum)
GCAGAACTCAGTGTTTTCTCAGACAGGTAAGCGAATTTACAGAGTACGGG
TTCTAGTATCATTCCTAGCAAAACCAAACTAAACGGTAATGTTCCCTATC
AGCATCCGTAACCTCTACTTCTCCTGTCAGTTAGTCCTCAGAGTAATTAG
ATCTTGATCGGGTTTTTAAAGAAAACCCGTGCAGTATTAGGATACGAAAA
ATCACTATTTTGCTCCGTTTTAGAATCCTTAAAGTATAAAGTTATTACGC
AAATGTGTTGAACAATGTAAATGTCAATACCATAAAGATTTTAGCATTTT
TTTAATCTCCATTTTTTGGTCTAATATTGCTTTTATTTGGTTTCCTTTAA
GGATTCCAGAGGCCTGAATGTTGGGCGGTGGGAGCTTCTTGACAATGCTA
TACCAATATTACAACGAAATCACCAGTCATTGTTGTATGATCGGCATGTA
ACACGAGGTCATTGTGAAATCGTATTAGAATCCGTTTCCCAAAATTGTCA
TCAAACTGTAATTTCCTACAAATTTAGGCAATGCATCCCACTTTTATTAT
TCGCCTTAAAACTCTGCATGCTGCAAATGGCTATACCTAATGAAATGTGT
TCCACAGAGCTTGACAGCCAACCTTACCTTCTCAACGACATGATATGTGA
CCACCAAATTTGCAGAGCATTAATGAGTGGTTTATCATATCATTGTAGGA
CACAACATAAAGTAACAGGCTTCATTACCTGAATTGCAGTATTATACACA
TTTAAACGTAATCTAAAATCAATTTTAAGATACGCACATAAGCTAAACAC
AACAAACCTTACAATAGTCATTTTATAAAAATACAATGGCGTACAAGTAA
AAGCGACCATAGCTATTTATAGTAAATTATGAAGAAAAATCTCTGTGTCT
GGAGTAGAAGCTTTGTGTGAGAAAAAAAAAAATTCATATAAAGAATCGAG
AGAAGATGTACCTGGGTCAGATATATAGTTCTTCATCTTTTTTTTTTTGG
GGGGGGGGGGGATTGACTTTTAAACGCTCACCTCTAGAACGTCAGTTTTT
GACAAGGTGTTTTTATCATTTACTTACATAATATTGTCACGGCGCAAATA
ACTATTTTGTTTTTGCTATGAAATGCCATCTTACTATTGTTGTGGATTTT
TTTAGCACTGTGTAGTATTCGTGAAGCCTGCCTGTACTCTGATAGTGCGT
CCTAATCCCTAGCATAGTTCGCTTCGATCAGACCATCCGTCTTGCTAGGA
CAACCGAAACAAATGGCCGCCAAATCAGACGACCCAAGTGACCGCGACGG
ACAAGGAGACGCAAAGAGGCTGAACTGTATCAAGAGGTGCAGTAACGTGT
TGGTGTCAGTGCTAGAAGGCTTCTTCTACAGGTAAGAATACTGTAAATGC
ATTTAAGTTCGTCTGGTTTTTATTTCGCACTAAGGCAAAAATGGAGTGTT
TGCCGTGGTTTTAAATTCCCGGCGGCGTTATAGTCACATACTGCTGCAGT
ATTGGACAAAAATGTTTGCGGTGGATTAAAGTTTGCAGTGAAACGGTCGC
CGCGAAAACCGCGAACATAAAACCACCGCGAACAAAAAATTGGTCTGTAT
TTGGACAGAAACAATAGTTTCTGAATTTTCAAATGATTCTCCAAAATGTG
CTTATAAAAAACTTATTAAAGTTAGAATTGTAGACCCAAGATAAGATGAA
TTATAGTATGTTGCTCTCAAATCCAAAAAATATAATCAATGGCAAATCAA
TCAAAAGTCTAATAAATAACAAAAGGCAGTAAGATAGAGATAGGTAGAAA
TCATTCAGCTGATTAAAATATTCTTATTTCATGGAGATTTATTTTTCTGA
CAGGATTGGCACAACACCTCATACTCTGTGCACTTGTAGCATTCGTAGTG
TTAGCGTTCTCTGTAGAATATGTGTTACCAAAACCAGGTGTGTGTCTTAT
GCGTTCGCCATTTTCATTTTCTACGCGATTTAATAGTCACGTGGCCCCAC
TATATTGTATATACATGTACTTCCTGTTGACAGATTAGGTAAGCTGGTGT
CCGAACACCCATGGCTGACCATCCTGCTGACCCTGCTCTTTAGCGGCTAC
TTGAGTGTCGGGATGGTCAAGTTCCAAGAGGAAAGGCGAGATGAGAAGTT
GTGGGTCCCGTACGGGTCACAGGTCATCGTGCACCGGAACTGGATCAACG
AGAAATTTCCGGCAAAATTCCGCTTCCAGTTCCTGCTGATTGAAGCCGAC
Coding sequence (CDS) from alignment at Sc0000051:1434505..1436754+ >transcript:BL96246_cuf0 ID=transcript:BL96246_cuf0|Name=transcript:BL96246_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1215bp|location=Sequence derived from alignment at Sc0000051:1434505..1436754+ (Branchiostoma lanceolatum)
AGAACTCAGTGTTTTCTCAGACAGTTCGCTTCGATCAGACCATCCGTCTT
GCTAGGACAACCGAAACAAATGGCCGCCAAATCAGACGACCCAAGTGACC
GCGACGGACAAGGAGACGCAAAGAGGCTGAACTGTATCAAGAGGTGCAGT
AACGTGTTGGTGTCAGTGCTAGAAGGCTTCTTCTACAGATTAGGTAAGCT
GGTGTCCGAACACCCATGGCTGACCATCCTGCTGACCCTGCTCTTTAGCG
GCTACTTGAGTGTCGGGATGGTCAAGTTCCAAGAGGAAAGGCGAGATGAG
AAGTTGTGGGTCCCGTACGGGTCACAGGTCATCGTGCACCGGAACTGGAT
CAACGAGAAATTTCCGGCAAAATTCCGCTTCCAGTTCCTGCTGATTGAAG
CCGACAGAACTCAGTGTTTTCTCAGACAGTTCGCTTCGATCAGACCATCC
GTCTTGCTAGGACAACCGAAACAAATGGCCGCCAAATCAGACGACCCAAG
TGACCGCGACGGACAAGGAGACGCAAAGAGGCTGAACTGTATCAAGAGGT
GCAGTAACGTGTTGGTGTCAGTGCTAGAAGGCTTCTTCTACAGATTAGGT
AAGCTGGTGTCCGAACACCCATGGCTGACCATCCTGCTGACCCTGCTCTT
TAGCGGCTACTTGAGTGTCGGGATGGTCAAGTTCCAAGAGGAAAGGCGAG
ATGAGAAGTTGTGGGTCCCGTACGGGTCACAGGTCATCGTGCACCGGAAC
TGGATCAACGAGAAATTTCCGGCAAAATTCCGCTTCCAGTTCCTGCTGAT
TGAAGCCGACAGAACTCAGTGTTTTCTCAGACAGTTCGCTTCGATCAGAC
CATCCGTCTTGCTAGGACAACCGAAACAAATGGCCGCCAAATCAGACGAC
CCAAGTGACCGCGACGGACAAGGAGACGCAAAGAGGCTGAACTGTATCAA
GAGGTGCAGTAACGTGTTGGTGTCAGTGCTAGAAGGCTTCTTCTACAGAT
TAGGTAAGCTGGTGTCCGAACACCCATGGCTGACCATCCTGCTGACCCTG
CTCTTTAGCGGCTACTTGAGTGTCGGGATGGTCAAGTTCCAAGAGGAAAG
GCGAGATGAGAAGTTGTGGGTCCCGTACGGGTCACAGGTCATCGTGCACC
GGAACTGGATCAACGAGAAATTTCCGGCAAAATTCCGCTTCCAGTTCCTG
CTGATTGAAGCCGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000051 | genome | Sc0000051:1434505..1436754 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96246_cuf0 |
| Biotype | protein_coding |
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