transcript:BL96240_cuf4 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96240_cuf4
Unique Nametranscript:BL96240_cuf4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96240_cuf4

>transcript:BL96240_cuf4-protein ID=transcript:BL96240_cuf4-protein|Name=transcript:BL96240_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=438bp
SHDCDANAACTNSPGSFTCACNTGYRGDGNTCSDINECAENTDNCHPEAS
CTNNRGSYSCACNTGYSGDGVVCSDIDECTDETDACDSNANCENTVGSYN
CNCKAGFAGNGRICTDVHECDAGQDNCHEHATCYNNIGSFSCVCDDGYSG
DGVSCTDNDECTLGTHNCHEDGTCINMDGSFTCVCNVGYTGNGVYCTDVQ
ECLLNLHNCDEHATCINIDGGVQCVCNDGWSGNGQECSDINECALGIDNC
DTEATCTNEPGSFFCTCNEGFTGNGVTCRDIDECGSNTDSCHDNATCHNT
VGSFHCTCDDGFRGDGVSCSDINECSEQSDDCDINASCTNTIGSFTCSCN
EGYRGNGEACSDIDECDEGSDACHDDATCTNSAGSYSCECNTGYSGDGKT
CTDINECTSGTHNCDDNAGCTNTKGSYSCACNIGYQGD
Run BLAST on NCBI

mRNA from alignment at Sc0000158:200352..206334-

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96240_cuf4 ID=transcript:BL96240_cuf4|Name=transcript:BL96240_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=5983bp|location=Sequence derived from alignment at Sc0000158:200352..206334- (Branchiostoma lanceolatum)
GGTCACATGACTGTGACGCTAACGCCGCCTGCACCAACTCGCCCGGTTCA TTCACCTGTGCATGCAACACTGGATACCGAGGGGACGGCAACACCTGTTC GGGTATATACATTGCAAAACATTACTAAAAACTACAATACAATGCTAAAC TTTCTTCCAACACTAAGGTATTCACGAATCGAATTTTCGACGACCACTGT GGTCGAAAATTCGATCCATGAATACCTTAGTATTGGAAGAAAGTTTAGCA TTGTATTATGATTACTACCAACATAGATGAGCTTACATTATATTACTAAA AACTATCGCTGGTGCTTTTTGATCTTGACAACCACTCAGTAAAAATCATT TTTTTCTTGATCAACCTAATCGCTAGCCATTAGTCGAAGTAAACTAACAA TTTCCTAAGACTACCACCCAATGAAACGCCGAGTGAGCTAAACAATAGCA TGAATACATATCTTCCTCCTTGTAAGAAACTGAAGCTTACAGTCACCTTT ATATTTTCAGATATAAACGAATGCGCCGAAAATACCGATAACTGTCATCC CGAGGCCTCTTGTACCAACAATCGAGGGTCCTACAGTTGTGCCTGTAACA CCGGGTACTCTGGAGACGGCGTGGTTTGTTCAGGTACTTCTAGATATTTC AATTGATTGATTGATAATTATCAAATGGTTTCTCAAACGGTGTGCATGCC CAGTTTGCTCGACTAGAAATCGACATTGGGCACACATGAAATTAATGATA ATGGGATGGAATTCTGAAGAAAATATGACATGGTCCTTCGTGTATCTTTC TATTATACGTTTAATAATAGTATGTGGTGACACCAGTACGTCAATGCCAA CAGAAGGAATTCTAACAACGAGATACATGTATATCTGACCTAACGTTTAA TCAACCATGTCCTCTTGACTTTGTCTGGTTTTTGTTTTCCTATATCTAAC ATTTTTCTTCACTTCATTTACATATCCAGTCATACTTTTTAGTTACGTAC CTGTTGGGATGCATATCTTACTCAGTCACTAGCCAAAAGTGGTGGAAGCT ATATCTGAAACGTCTGACCGTTTCCAAAATCTAGTTGCTTGTTATCTTAT TACCTGGATGTCTAATCTTCATCGACGTACATGTAATGTAATCAAATTAT TTCAGATATCGACGAGTGTACTGATGAAACAGATGCTTGTGATTCCAACG CCAACTGCGAGAACACTGTCGGCTCATATAATTGTAACTGCAAGGCTGGG TTTGCAGGCAATGGTCGGATTTGTACGGGTAAGTTAGAGTGTTAAACACC GGTTCTAGTTTTAATGATAAAATTACTGGATGCAATCTTACATACTTTGT AGCTTACAGATTATAAATTAAAAATGTATGGTGATATAGATATTGCAAAC GCTTAAGCTAAAAACATTTGACGATAAAAGAACCTTACACAGGTAAAATT AAACCGCGACCAAGTGACGTTACAACAAAAGAAAATAACTTTTAAAGTGT ACATGTAATCATGTTTTAGCCGTAATGTTTCCTGTGGTAACGTACCCTAA TCTTTGAGTAAATCTACCGATGACAAGGCATTATCAAAAGGGCCACAAGA GTCTATCAAAAACTAGTTGGCCCTTTGCATGCCGCATTGTCACCGATAGA TCTGCTTCGAGATTTTAACACAATTACTCGGCAGATGTCCACGAGTGCGA CGCTGGCCAGGACAATTGTCACGAACATGCCACCTGTTACAACAACATCG GGTCATTTTCCTGCGTATGTGACGACGGCTACTCCGGGGACGGAGTCTCT TGCACAGGTAAACATCATCCATGCCTACCGTTAGAAATTATTTCTAAACT GAGTGCATATATTGACGTTTTATCTCATTTTTTGCTTCTTACCTATAACG TCTTTTTCATCGTAATATTTATAACTTGCCTTTAGATCCGTGGCTCATGT CTTTATCAATTACTGCAATGAAAAATGAAGAAGAAAAATCCTCGATCTTG GTGCAATTCCTGTGTTTCCTGCTTTAAAACAGCAAGTGTGGCATTGTCAT CTGTCCACCACAAAAGGTGGCAGATATACACTTCATGGGCCATGCTACAG CAGATAGAATTGGTTTACATTTAGCATCATGGTTTTTAACGATCCTTTTA TGAGCACAAGAGAGAACAGTGATTTTTGTGTACGTTGTCCATATATGTAC TAGGGTTCTTAGCTCATATAGGTATTCATATATATATATATTCGATATCC TTCACAAATCAATATATGAAGTGATACACATAGATATGCATGTGTTACAG ATAATGACGAGTGTACCTTAGGCACCCATAACTGCCACGAAGATGGAACC TGCATCAACATGGACGGCTCTTTTACCTGTGTCTGTAACGTGGGCTATAC TGGAAACGGGGTCTACTGTACGGGTAAGCACATATAAACAGCGACGGGGT AAAACAAAACAAACATAGCATACTGTTATGGAAAATACATGATTGTGAAA ACTAAATCAAAAATAGACCATAAACAATTCATCCTCGTAAATTAGTAGCC CCTTTCATGGAATTTCGGTCATCCTTGATTTATGAGTAGTTCTACGAACT CTGACCTGCCACTTCCTGCATCTGGGTTGTCTTCTATCATTTTTGACCTA ACTTCCTGTTAGCGTCAAATGCCAATGTGCAGACAGACAAGACCCTTACA AACACACACCAAATGAATACAAACCATTCGGTTCAAATGAATTCGGTTCG GATGCAAATGAAGATGAAACCTAAATCTACCTAATAATATTCTGTACATA CATTGGTTAATTGAATTATCCCATGGTGCACGTATTTACCTTTAATCGCA GATATGTAAATATGTTGTGAACTTTATATATAAATTAATGGGTAATTGCA TTTTCCGTGTGTGTTGTCTAAACTACCAATACACTTGTAACCTTTTCTAG ATGTCCAGGAATGCTTGTTGAACCTGCATAATTGTGACGAACACGCAACG TGTATCAACATCGACGGGGGTGTTCAATGCGTATGCAACGACGGGTGGTC AGGCAATGGTCAGGAATGCTCAGGTAATGTCAAATCTTGAGATTCATAAT CTTCCCATGTCAACCGTCTGTTATAACTACATTTTCACACTGCTAAATTT TCAAGAACTCATCATTCTTAAGTCGAGGATTGAGCTCAAAATCAACATTT CTAAAATTTAATTTCTGTCTACTTTTCATTTTCATAAATAACAATTGACT TAATATGATAATACTTAACCGCAGATATAAATGAGTGTGCCTTGGGCATA GACAACTGCGACACAGAGGCCACCTGCACCAATGAACCCGGGTCATTCTT CTGTACTTGTAATGAGGGATTCACCGGAAATGGCGTCACATGTAGAGGTA TGTTATCAGTATGTCTTACACCATTTAGTAGAAAGTAGCGCCCCCTCGAC CACCCCCCAGTCAAGAGATCGGTAAGCGGTAAGTATTAAAGCTACAAAAC GTGTCGCTAGCGAATAGGTAATCAAAAGAATATGGATAATACATGATTAG AAGATCATACATTTGATGGATTACATTAAACAGTAGCTGCGGTTAAGCCG GCGTCACAATTCATGCGAGCCTCGTCCGAATTTGTAGATCGCCCGAAGTT CGTCGAATTTCAAAATCGCCCGAGCGTCGACCGTAATTCTATAGCTAAAA TCTGCCCCGTCACAATTGGGCAGATGGTGAAATTTTCTTTTCTGACGGGG GCTTTAGCGACTGTAATGTGCCTCTGGACCAAGAGATTGGAAGTTAGAAA CCTTGCTGTTGCCATCCACCCGACGAGCACCTTAGGACAGGACGTTAAGC CATTGTCCACTGGCCATAGTACTTGTCAAAAAGAGCTAAGGAAATCTCCC CCGTAAAATGAACATGTAAATACTGCACATAGCGTGTTGAGTGCTATAAA CTGGTTCACTATCATTATTTACTGATGCATTCGATCTTATTACAGATATT GATGAGTGTGGATCTAACACCGACAGCTGCCACGACAATGCGACCTGTCA CAATACGGTCGGATCGTTCCACTGTACCTGTGATGACGGGTTCAGGGGGG ATGGAGTCTCCTGTTCAGGTAGGATCATCAGTTACATTCATCTGAAGTAC AGCCTGTATACTAGTACCCATCGGAGTAATGAGGCTGTTGCAGTGCCTTT TAACGTGCTTGAGGCACTCCATCCATTCTACGTCCCTTCAAAAATACGAA TGCAGCTGCAGACAGGATGGCCGTACCCAGAGTCAACCCGGGGTCTATCA GCTAGGAACTCATTGAAACCTAGAGCCTATCTAAATGTGAGGCCTCTACC AATTTAGCTACAATTAGTCGATCCTCTACAAAACATATTGCATCAGCATG TGTAAACCATAACAACGACTTTAAGGCTTGCTTTGGATGGCAATGCATGT AGTTTTTTAAAAATAATTTTGCATAAAATTGATTCTTCTAAGACCTAAAC AATCATGTGCCAAAAATGTTTTGGATACTTCATTTGAATTACAACAGAAT ATGCATATCGGATGCTGCATAGTTCATATCGTTTTGAGCAGCAGCTCATT TGAATGCTCTTTTTTTCTGTGGTAAAAGCTATCTATATGTTTTAGAACAT TCCCTTCTGGATGTTGTGAACACGTGAGAGTAAGACACGTGGACATTACA GGGTAGGGTTTGTAAGACTGCTGACTTATTGATTAGCCAGAGGATGCATG TGGTTATACCGGCTACATAGATACAGACTGCATCTCGCATTCCATTGAGA ATGTTGGGCAGGTATATTTCTATCAACCATTGACACTCAGGACGCAGTGT AATCAACCACTACCATATTGGATAGAAAAAAAAATCTGTTGCGCCTTCTC AACGATTTCACGCTTGCCTGCATTACCTTAGATATTCAAACTGGCTTACT TATCTTATGTGTGGCAATTGGTTGTGTGACAAATAGACTAATTTTTGTAC TTTGTATGGTTTTCAGATATCAACGAGTGCTCGGAACAAAGTGATGATTG TGACATCAACGCCAGCTGCACCAATACCATCGGATCGTTCACCTGTTCCT GTAACGAGGGGTACAGAGGGAATGGCGAGGCCTGTTCAGGTACTATGTTC ATCTTCTTCTTTCTATTGCTTCCAACAGCACATTTCTAGTTAAATGTGGA GATAAAAGGCACATTGTACAACGACAACATCATCATCACCATCAGTGCTT AGGCACGGTCAGGGCCCTTAAGGGGGGGACGCCCCCTTTCGTACGCCAGG TCTCCCGCCCGGATGAATCACGAACTCCAGATTTGACCATCACACACCAG GGAATGCCCCTTCTTTTTTTCAAAAGGTGTGGTTGGGGCTTAAGCGTTCT TTAAAACAACTTATGAATTCAATTATTCTTCAGATATTGATGAGTGTGAC GAAGGAAGTGATGCTTGCCACGACGACGCAACCTGCACCAACAGTGCTGG CTCCTATTCCTGCGAGTGTAACACCGGGTACTCCGGGGACGGCAAGACTT GCACAGGTAAACATTCGTCATGAAGATATAAGGTACCGTTAGTATACTGT ATAATGACAAGCTCACATCATCACATTACGAATCATTCCTTTATTCTGTG TAACAGTCAACACGAAAAATAAGACTGGATCTTCTATCTTCTACTATATT GTTAGTTCACAGCATCACCTTAATTAATACGATGCATCACAAAAGTGCGA CAACCAGGAAAGAGAGACAGAATTGATCCTCATCTTTTTAAACAGCTTCT AGGGTCTAGAGATATAAAAATGAATATCGTATCGATCAGTAGTTAAAAAG TAAATTAATTTCATCGTTAACATCAGATATCAACGAGTGTACGTCGGGTA CACACAACTGTGATGACAACGCAGGATGTACCAACACAAAGGGATCCTAC AGCTGCGCCTGTAACATCGGATACCAAGGGGAC

Coding sequence (CDS) from alignment at Sc0000158:200352..206334-

>transcript:BL96240_cuf4 ID=transcript:BL96240_cuf4|Name=transcript:BL96240_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=14454bp|location=Sequence derived from alignment at Sc0000158:200352..206334- (Branchiostoma lanceolatum)
TCACATGACTGTGACGCTAACGCCGCCTGCACCAACTCGCCCGGTTCATT
CACCTGTGCATGCAACACTGGATACCGAGGGGACGGCAACACCTGTTCGG
ATATAAACGAATGCGCCGAAAATACCGATAACTGTCATCCCGAGGCCTCT
TGTACCAACAATCGAGGGTCCTACAGTTGTGCCTGTAACACCGGGTACTC
TGGAGACGGCGTGGTTTGTTCAGATATCGACGAGTGTACTGATGAAACAG
ATGCTTGTGATTCCAACGCCAACTGCGAGAACACTGTCGGCTCATATAAT
TGTAACTGCAAGGCTGGGTTTGCAGGCAATGGTCGGATTTGTACGGATGT
CCACGAGTGCGACGCTGGCCAGGACAATTGTCACGAACATGCCACCTGTT
ACAACAACATCGGGTCATTTTCCTGCGTATGTGACGACGGCTACTCCGGG
GACGGAGTCTCTTGCACAGATAATGACGAGTGTACCTTAGGCACCCATAA
CTGCCACGAAGATGGAACCTGCATCAACATGGACGGCTCTTTTACCTGTG
TCTGTAACGTGGGCTATACTGGAAACGGGGTCTACTGTACGGATGTCCAG
GAATGCTTGTTGAACCTGCATAATTGTGACGAACACGCAACGTGTATCAA
CATCGACGGGGGTGTTCAATGCGTATGCAACGACGGGTGGTCAGGCAATG
GTCAGGAATGCTCAGATATAAATGAGTGTGCCTTGGGCATAGACAACTGC
GACACAGAGGCCACCTGCACCAATGAACCCGGGTCATTCTTCTGTACTTG
TAATGAGGGATTCACCGGAAATGGCGTCACATGTAGAGATATTGATGAGT
GTGGATCTAACACCGACAGCTGCCACGACAATGCGACCTGTCACAATACG
GTCGGATCGTTCCACTGTACCTGTGATGACGGGTTCAGGGGGGATGGAGT
CTCCTGTTCAGATATCAACGAGTGCTCGGAACAAAGTGATGATTGTGACA
TCAACGCCAGCTGCACCAATACCATCGGATCGTTCACCTGTTCCTGTAAC
GAGGGGTACAGAGGGAATGGCGAGGCCTGTTCAGATATTGATGAGTGTGA
CGAAGGAAGTGATGCTTGCCACGACGACGCAACCTGCACCAACAGTGCTG
GCTCCTATTCCTGCGAGTGTAACACCGGGTACTCCGGGGACGGCAAGACT
TGCACAGATATCAACGAGTGTACGTCGGGTACACACAACTGTGATGACAA
CGCAGGATGTACCAACACAAAGGGATCCTACAGCTGCGCCTGTAACATCG
GATACCAAGGGGACTCACATGACTGTGACGCTAACGCCGCCTGCACCAAC
TCGCCCGGTTCATTCACCTGTGCATGCAACACTGGATACCGAGGGGACGG
CAACACCTGTTCGGATATAAACGAATGCGCCGAAAATACCGATAACTGTC
ATCCCGAGGCCTCTTGTACCAACAATCGAGGGTCCTACAGTTGTGCCTGT
AACACCGGGTACTCTGGAGACGGCGTGGTTTGTTCAGATATCGACGAGTG
TACTGATGAAACAGATGCTTGTGATTCCAACGCCAACTGCGAGAACACTG
TCGGCTCATATAATTGTAACTGCAAGGCTGGGTTTGCAGGCAATGGTCGG
ATTTGTACGGATGTCCACGAGTGCGACGCTGGCCAGGACAATTGTCACGA
ACATGCCACCTGTTACAACAACATCGGGTCATTTTCCTGCGTATGTGACG
ACGGCTACTCCGGGGACGGAGTCTCTTGCACAGATAATGACGAGTGTACC
TTAGGCACCCATAACTGCCACGAAGATGGAACCTGCATCAACATGGACGG
CTCTTTTACCTGTGTCTGTAACGTGGGCTATACTGGAAACGGGGTCTACT
GTACGGATGTCCAGGAATGCTTGTTGAACCTGCATAATTGTGACGAACAC
GCAACGTGTATCAACATCGACGGGGGTGTTCAATGCGTATGCAACGACGG
GTGGTCAGGCAATGGTCAGGAATGCTCAGATATAAATGAGTGTGCCTTGG
GCATAGACAACTGCGACACAGAGGCCACCTGCACCAATGAACCCGGGTCA
TTCTTCTGTACTTGTAATGAGGGATTCACCGGAAATGGCGTCACATGTAG
AGATATTGATGAGTGTGGATCTAACACCGACAGCTGCCACGACAATGCGA
CCTGTCACAATACGGTCGGATCGTTCCACTGTACCTGTGATGACGGGTTC
AGGGGGGATGGAGTCTCCTGTTCAGATATCAACGAGTGCTCGGAACAAAG
TGATGATTGTGACATCAACGCCAGCTGCACCAATACCATCGGATCGTTCA
CCTGTTCCTGTAACGAGGGGTACAGAGGGAATGGCGAGGCCTGTTCAGAT
ATTGATGAGTGTGACGAAGGAAGTGATGCTTGCCACGACGACGCAACCTG
CACCAACAGTGCTGGCTCCTATTCCTGCGAGTGTAACACCGGGTACTCCG
GGGACGGCAAGACTTGCACAGATATCAACGAGTGTACGTCGGGTACACAC
AACTGTGATGACAACGCAGGATGTACCAACACAAAGGGATCCTACAGCTG
CGCCTGTAACATCGGATACCAAGGGGACTCACATGACTGTGACGCTAACG
CCGCCTGCACCAACTCGCCCGGTTCATTCACCTGTGCATGCAACACTGGA
TACCGAGGGGACGGCAACACCTGTTCGGATATAAACGAATGCGCCGAAAA
TACCGATAACTGTCATCCCGAGGCCTCTTGTACCAACAATCGAGGGTCCT
ACAGTTGTGCCTGTAACACCGGGTACTCTGGAGACGGCGTGGTTTGTTCA
GATATCGACGAGTGTACTGATGAAACAGATGCTTGTGATTCCAACGCCAA
CTGCGAGAACACTGTCGGCTCATATAATTGTAACTGCAAGGCTGGGTTTG
CAGGCAATGGTCGGATTTGTACGGATGTCCACGAGTGCGACGCTGGCCAG
GACAATTGTCACGAACATGCCACCTGTTACAACAACATCGGGTCATTTTC
CTGCGTATGTGACGACGGCTACTCCGGGGACGGAGTCTCTTGCACAGATA
ATGACGAGTGTACCTTAGGCACCCATAACTGCCACGAAGATGGAACCTGC
ATCAACATGGACGGCTCTTTTACCTGTGTCTGTAACGTGGGCTATACTGG
AAACGGGGTCTACTGTACGGATGTCCAGGAATGCTTGTTGAACCTGCATA
ATTGTGACGAACACGCAACGTGTATCAACATCGACGGGGGTGTTCAATGC
GTATGCAACGACGGGTGGTCAGGCAATGGTCAGGAATGCTCAGATATAAA
TGAGTGTGCCTTGGGCATAGACAACTGCGACACAGAGGCCACCTGCACCA
ATGAACCCGGGTCATTCTTCTGTACTTGTAATGAGGGATTCACCGGAAAT
GGCGTCACATGTAGAGATATTGATGAGTGTGGATCTAACACCGACAGCTG
CCACGACAATGCGACCTGTCACAATACGGTCGGATCGTTCCACTGTACCT
GTGATGACGGGTTCAGGGGGGATGGAGTCTCCTGTTCAGATATCAACGAG
TGCTCGGAACAAAGTGATGATTGTGACATCAACGCCAGCTGCACCAATAC
CATCGGATCGTTCACCTGTTCCTGTAACGAGGGGTACAGAGGGAATGGCG
AGGCCTGTTCAGATATTGATGAGTGTGACGAAGGAAGTGATGCTTGCCAC
GACGACGCAACCTGCACCAACAGTGCTGGCTCCTATTCCTGCGAGTGTAA
CACCGGGTACTCCGGGGACGGCAAGACTTGCACAGATATCAACGAGTGTA
CGTCGGGTACACACAACTGTGATGACAACGCAGGATGTACCAACACAAAG
GGATCCTACAGCTGCGCCTGTAACATCGGATACCAAGGGGACTCACATGA
CTGTGACGCTAACGCCGCCTGCACCAACTCGCCCGGTTCATTCACCTGTG
CATGCAACACTGGATACCGAGGGGACGGCAACACCTGTTCGGATATAAAC
GAATGCGCCGAAAATACCGATAACTGTCATCCCGAGGCCTCTTGTACCAA
CAATCGAGGGTCCTACAGTTGTGCCTGTAACACCGGGTACTCTGGAGACG
GCGTGGTTTGTTCAGATATCGACGAGTGTACTGATGAAACAGATGCTTGT
GATTCCAACGCCAACTGCGAGAACACTGTCGGCTCATATAATTGTAACTG
CAAGGCTGGGTTTGCAGGCAATGGTCGGATTTGTACGGATGTCCACGAGT
GCGACGCTGGCCAGGACAATTGTCACGAACATGCCACCTGTTACAACAAC
ATCGGGTCATTTTCCTGCGTATGTGACGACGGCTACTCCGGGGACGGAGT
CTCTTGCACAGATAATGACGAGTGTACCTTAGGCACCCATAACTGCCACG
AAGATGGAACCTGCATCAACATGGACGGCTCTTTTACCTGTGTCTGTAAC
GTGGGCTATACTGGAAACGGGGTCTACTGTACGGATGTCCAGGAATGCTT
GTTGAACCTGCATAATTGTGACGAACACGCAACGTGTATCAACATCGACG
GGGGTGTTCAATGCGTATGCAACGACGGGTGGTCAGGCAATGGTCAGGAA
TGCTCAGATATAAATGAGTGTGCCTTGGGCATAGACAACTGCGACACAGA
GGCCACCTGCACCAATGAACCCGGGTCATTCTTCTGTACTTGTAATGAGG
GATTCACCGGAAATGGCGTCACATGTAGAGATATTGATGAGTGTGGATCT
AACACCGACAGCTGCCACGACAATGCGACCTGTCACAATACGGTCGGATC
GTTCCACTGTACCTGTGATGACGGGTTCAGGGGGGATGGAGTCTCCTGTT
CAGATATCAACGAGTGCTCGGAACAAAGTGATGATTGTGACATCAACGCC
AGCTGCACCAATACCATCGGATCGTTCACCTGTTCCTGTAACGAGGGGTA
CAGAGGGAATGGCGAGGCCTGTTCAGATATTGATGAGTGTGACGAAGGAA
GTGATGCTTGCCACGACGACGCAACCTGCACCAACAGTGCTGGCTCCTAT
TCCTGCGAGTGTAACACCGGGTACTCCGGGGACGGCAAGACTTGCACAGA
TATCAACGAGTGTACGTCGGGTACACACAACTGTGATGACAACGCAGGAT
GTACCAACACAAAGGGATCCTACAGCTGCGCCTGTAACATCGGATACCAA
GGGGACTCACATGACTGTGACGCTAACGCCGCCTGCACCAACTCGCCCGG
TTCATTCACCTGTGCATGCAACACTGGATACCGAGGGGACGGCAACACCT
GTTCGGATATAAACGAATGCGCCGAAAATACCGATAACTGTCATCCCGAG
GCCTCTTGTACCAACAATCGAGGGTCCTACAGTTGTGCCTGTAACACCGG
GTACTCTGGAGACGGCGTGGTTTGTTCAGATATCGACGAGTGTACTGATG
AAACAGATGCTTGTGATTCCAACGCCAACTGCGAGAACACTGTCGGCTCA
TATAATTGTAACTGCAAGGCTGGGTTTGCAGGCAATGGTCGGATTTGTAC
GGATGTCCACGAGTGCGACGCTGGCCAGGACAATTGTCACGAACATGCCA
CCTGTTACAACAACATCGGGTCATTTTCCTGCGTATGTGACGACGGCTAC
TCCGGGGACGGAGTCTCTTGCACAGATAATGACGAGTGTACCTTAGGCAC
CCATAACTGCCACGAAGATGGAACCTGCATCAACATGGACGGCTCTTTTA
CCTGTGTCTGTAACGTGGGCTATACTGGAAACGGGGTCTACTGTACGGAT
GTCCAGGAATGCTTGTTGAACCTGCATAATTGTGACGAACACGCAACGTG
TATCAACATCGACGGGGGTGTTCAATGCGTATGCAACGACGGGTGGTCAG
GCAATGGTCAGGAATGCTCAGATATAAATGAGTGTGCCTTGGGCATAGAC
AACTGCGACACAGAGGCCACCTGCACCAATGAACCCGGGTCATTCTTCTG
TACTTGTAATGAGGGATTCACCGGAAATGGCGTCACATGTAGAGATATTG
ATGAGTGTGGATCTAACACCGACAGCTGCCACGACAATGCGACCTGTCAC
AATACGGTCGGATCGTTCCACTGTACCTGTGATGACGGGTTCAGGGGGGA
TGGAGTCTCCTGTTCAGATATCAACGAGTGCTCGGAACAAAGTGATGATT
GTGACATCAACGCCAGCTGCACCAATACCATCGGATCGTTCACCTGTTCC
TGTAACGAGGGGTACAGAGGGAATGGCGAGGCCTGTTCAGATATTGATGA
GTGTGACGAAGGAAGTGATGCTTGCCACGACGACGCAACCTGCACCAACA
GTGCTGGCTCCTATTCCTGCGAGTGTAACACCGGGTACTCCGGGGACGGC
AAGACTTGCACAGATATCAACGAGTGTACGTCGGGTACACACAACTGTGA
TGACAACGCAGGATGTACCAACACAAAGGGATCCTACAGCTGCGCCTGTA
ACATCGGATACCAAGGGGACTCACATGACTGTGACGCTAACGCCGCCTGC
ACCAACTCGCCCGGTTCATTCACCTGTGCATGCAACACTGGATACCGAGG
GGACGGCAACACCTGTTCGGATATAAACGAATGCGCCGAAAATACCGATA
ACTGTCATCCCGAGGCCTCTTGTACCAACAATCGAGGGTCCTACAGTTGT
GCCTGTAACACCGGGTACTCTGGAGACGGCGTGGTTTGTTCAGATATCGA
CGAGTGTACTGATGAAACAGATGCTTGTGATTCCAACGCCAACTGCGAGA
ACACTGTCGGCTCATATAATTGTAACTGCAAGGCTGGGTTTGCAGGCAAT
GGTCGGATTTGTACGGATGTCCACGAGTGCGACGCTGGCCAGGACAATTG
TCACGAACATGCCACCTGTTACAACAACATCGGGTCATTTTCCTGCGTAT
GTGACGACGGCTACTCCGGGGACGGAGTCTCTTGCACAGATAATGACGAG
TGTACCTTAGGCACCCATAACTGCCACGAAGATGGAACCTGCATCAACAT
GGACGGCTCTTTTACCTGTGTCTGTAACGTGGGCTATACTGGAAACGGGG
TCTACTGTACGGATGTCCAGGAATGCTTGTTGAACCTGCATAATTGTGAC
GAACACGCAACGTGTATCAACATCGACGGGGGTGTTCAATGCGTATGCAA
CGACGGGTGGTCAGGCAATGGTCAGGAATGCTCAGATATAAATGAGTGTG
CCTTGGGCATAGACAACTGCGACACAGAGGCCACCTGCACCAATGAACCC
GGGTCATTCTTCTGTACTTGTAATGAGGGATTCACCGGAAATGGCGTCAC
ATGTAGAGATATTGATGAGTGTGGATCTAACACCGACAGCTGCCACGACA
ATGCGACCTGTCACAATACGGTCGGATCGTTCCACTGTACCTGTGATGAC
GGGTTCAGGGGGGATGGAGTCTCCTGTTCAGATATCAACGAGTGCTCGGA
ACAAAGTGATGATTGTGACATCAACGCCAGCTGCACCAATACCATCGGAT
CGTTCACCTGTTCCTGTAACGAGGGGTACAGAGGGAATGGCGAGGCCTGT
TCAGATATTGATGAGTGTGACGAAGGAAGTGATGCTTGCCACGACGACGC
AACCTGCACCAACAGTGCTGGCTCCTATTCCTGCGAGTGTAACACCGGGT
ACTCCGGGGACGGCAAGACTTGCACAGATATCAACGAGTGTACGTCGGGT
ACACACAACTGTGATGACAACGCAGGATGTACCAACACAAAGGGATCCTA
CAGCTGCGCCTGTAACATCGGATACCAAGGGGACTCACATGACTGTGACG
CTAACGCCGCCTGCACCAACTCGCCCGGTTCATTCACCTGTGCATGCAAC
ACTGGATACCGAGGGGACGGCAACACCTGTTCGGATATAAACGAATGCGC
CGAAAATACCGATAACTGTCATCCCGAGGCCTCTTGTACCAACAATCGAG
GGTCCTACAGTTGTGCCTGTAACACCGGGTACTCTGGAGACGGCGTGGTT
TGTTCAGATATCGACGAGTGTACTGATGAAACAGATGCTTGTGATTCCAA
CGCCAACTGCGAGAACACTGTCGGCTCATATAATTGTAACTGCAAGGCTG
GGTTTGCAGGCAATGGTCGGATTTGTACGGATGTCCACGAGTGCGACGCT
GGCCAGGACAATTGTCACGAACATGCCACCTGTTACAACAACATCGGGTC
ATTTTCCTGCGTATGTGACGACGGCTACTCCGGGGACGGAGTCTCTTGCA
CAGATAATGACGAGTGTACCTTAGGCACCCATAACTGCCACGAAGATGGA
ACCTGCATCAACATGGACGGCTCTTTTACCTGTGTCTGTAACGTGGGCTA
TACTGGAAACGGGGTCTACTGTACGGATGTCCAGGAATGCTTGTTGAACC
TGCATAATTGTGACGAACACGCAACGTGTATCAACATCGACGGGGGTGTT
CAATGCGTATGCAACGACGGGTGGTCAGGCAATGGTCAGGAATGCTCAGA
TATAAATGAGTGTGCCTTGGGCATAGACAACTGCGACACAGAGGCCACCT
GCACCAATGAACCCGGGTCATTCTTCTGTACTTGTAATGAGGGATTCACC
GGAAATGGCGTCACATGTAGAGATATTGATGAGTGTGGATCTAACACCGA
CAGCTGCCACGACAATGCGACCTGTCACAATACGGTCGGATCGTTCCACT
GTACCTGTGATGACGGGTTCAGGGGGGATGGAGTCTCCTGTTCAGATATC
AACGAGTGCTCGGAACAAAGTGATGATTGTGACATCAACGCCAGCTGCAC
CAATACCATCGGATCGTTCACCTGTTCCTGTAACGAGGGGTACAGAGGGA
ATGGCGAGGCCTGTTCAGATATTGATGAGTGTGACGAAGGAAGTGATGCT
TGCCACGACGACGCAACCTGCACCAACAGTGCTGGCTCCTATTCCTGCGA
GTGTAACACCGGGTACTCCGGGGACGGCAAGACTTGCACAGATATCAACG
AGTGTACGTCGGGTACACACAACTGTGATGACAACGCAGGATGTACCAAC
ACAAAGGGATCCTACAGCTGCGCCTGTAACATCGGATACCAAGGGGACTC
ACATGACTGTGACGCTAACGCCGCCTGCACCAACTCGCCCGGTTCATTCA
CCTGTGCATGCAACACTGGATACCGAGGGGACGGCAACACCTGTTCGGAT
ATAAACGAATGCGCCGAAAATACCGATAACTGTCATCCCGAGGCCTCTTG
TACCAACAATCGAGGGTCCTACAGTTGTGCCTGTAACACCGGGTACTCTG
GAGACGGCGTGGTTTGTTCAGATATCGACGAGTGTACTGATGAAACAGAT
GCTTGTGATTCCAACGCCAACTGCGAGAACACTGTCGGCTCATATAATTG
TAACTGCAAGGCTGGGTTTGCAGGCAATGGTCGGATTTGTACGGATGTCC
ACGAGTGCGACGCTGGCCAGGACAATTGTCACGAACATGCCACCTGTTAC
AACAACATCGGGTCATTTTCCTGCGTATGTGACGACGGCTACTCCGGGGA
CGGAGTCTCTTGCACAGATAATGACGAGTGTACCTTAGGCACCCATAACT
GCCACGAAGATGGAACCTGCATCAACATGGACGGCTCTTTTACCTGTGTC
TGTAACGTGGGCTATACTGGAAACGGGGTCTACTGTACGGATGTCCAGGA
ATGCTTGTTGAACCTGCATAATTGTGACGAACACGCAACGTGTATCAACA
TCGACGGGGGTGTTCAATGCGTATGCAACGACGGGTGGTCAGGCAATGGT
CAGGAATGCTCAGATATAAATGAGTGTGCCTTGGGCATAGACAACTGCGA
CACAGAGGCCACCTGCACCAATGAACCCGGGTCATTCTTCTGTACTTGTA
ATGAGGGATTCACCGGAAATGGCGTCACATGTAGAGATATTGATGAGTGT
GGATCTAACACCGACAGCTGCCACGACAATGCGACCTGTCACAATACGGT
CGGATCGTTCCACTGTACCTGTGATGACGGGTTCAGGGGGGATGGAGTCT
CCTGTTCAGATATCAACGAGTGCTCGGAACAAAGTGATGATTGTGACATC
AACGCCAGCTGCACCAATACCATCGGATCGTTCACCTGTTCCTGTAACGA
GGGGTACAGAGGGAATGGCGAGGCCTGTTCAGATATTGATGAGTGTGACG
AAGGAAGTGATGCTTGCCACGACGACGCAACCTGCACCAACAGTGCTGGC
TCCTATTCCTGCGAGTGTAACACCGGGTACTCCGGGGACGGCAAGACTTG
CACAGATATCAACGAGTGTACGTCGGGTACACACAACTGTGATGACAACG
CAGGATGTACCAACACAAAGGGATCCTACAGCTGCGCCTGTAACATCGGA
TACCAAGGGGACTCACATGACTGTGACGCTAACGCCGCCTGCACCAACTC
GCCCGGTTCATTCACCTGTGCATGCAACACTGGATACCGAGGGGACGGCA
ACACCTGTTCGGATATAAACGAATGCGCCGAAAATACCGATAACTGTCAT
CCCGAGGCCTCTTGTACCAACAATCGAGGGTCCTACAGTTGTGCCTGTAA
CACCGGGTACTCTGGAGACGGCGTGGTTTGTTCAGATATCGACGAGTGTA
CTGATGAAACAGATGCTTGTGATTCCAACGCCAACTGCGAGAACACTGTC
GGCTCATATAATTGTAACTGCAAGGCTGGGTTTGCAGGCAATGGTCGGAT
TTGTACGGATGTCCACGAGTGCGACGCTGGCCAGGACAATTGTCACGAAC
ATGCCACCTGTTACAACAACATCGGGTCATTTTCCTGCGTATGTGACGAC
GGCTACTCCGGGGACGGAGTCTCTTGCACAGATAATGACGAGTGTACCTT
AGGCACCCATAACTGCCACGAAGATGGAACCTGCATCAACATGGACGGCT
CTTTTACCTGTGTCTGTAACGTGGGCTATACTGGAAACGGGGTCTACTGT
ACGGATGTCCAGGAATGCTTGTTGAACCTGCATAATTGTGACGAACACGC
AACGTGTATCAACATCGACGGGGGTGTTCAATGCGTATGCAACGACGGGT
GGTCAGGCAATGGTCAGGAATGCTCAGATATAAATGAGTGTGCCTTGGGC
ATAGACAACTGCGACACAGAGGCCACCTGCACCAATGAACCCGGGTCATT
CTTCTGTACTTGTAATGAGGGATTCACCGGAAATGGCGTCACATGTAGAG
ATATTGATGAGTGTGGATCTAACACCGACAGCTGCCACGACAATGCGACC
TGTCACAATACGGTCGGATCGTTCCACTGTACCTGTGATGACGGGTTCAG
GGGGGATGGAGTCTCCTGTTCAGATATCAACGAGTGCTCGGAACAAAGTG
ATGATTGTGACATCAACGCCAGCTGCACCAATACCATCGGATCGTTCACC
TGTTCCTGTAACGAGGGGTACAGAGGGAATGGCGAGGCCTGTTCAGATAT
TGATGAGTGTGACGAAGGAAGTGATGCTTGCCACGACGACGCAACCTGCA
CCAACAGTGCTGGCTCCTATTCCTGCGAGTGTAACACCGGGTACTCCGGG
GACGGCAAGACTTGCACAGATATCAACGAGTGTACGTCGGGTACACACAA
CTGTGATGACAACGCAGGATGTACCAACACAAAGGGATCCTACAGCTGCG
CCTGTAACATCGGATACCAAGGGGACTCACATGACTGTGACGCTAACGCC
GCCTGCACCAACTCGCCCGGTTCATTCACCTGTGCATGCAACACTGGATA
CCGAGGGGACGGCAACACCTGTTCGGATATAAACGAATGCGCCGAAAATA
CCGATAACTGTCATCCCGAGGCCTCTTGTACCAACAATCGAGGGTCCTAC
AGTTGTGCCTGTAACACCGGGTACTCTGGAGACGGCGTGGTTTGTTCAGA
TATCGACGAGTGTACTGATGAAACAGATGCTTGTGATTCCAACGCCAACT
GCGAGAACACTGTCGGCTCATATAATTGTAACTGCAAGGCTGGGTTTGCA
GGCAATGGTCGGATTTGTACGGATGTCCACGAGTGCGACGCTGGCCAGGA
CAATTGTCACGAACATGCCACCTGTTACAACAACATCGGGTCATTTTCCT
GCGTATGTGACGACGGCTACTCCGGGGACGGAGTCTCTTGCACAGATAAT
GACGAGTGTACCTTAGGCACCCATAACTGCCACGAAGATGGAACCTGCAT
CAACATGGACGGCTCTTTTACCTGTGTCTGTAACGTGGGCTATACTGGAA
ACGGGGTCTACTGTACGGATGTCCAGGAATGCTTGTTGAACCTGCATAAT
TGTGACGAACACGCAACGTGTATCAACATCGACGGGGGTGTTCAATGCGT
ATGCAACGACGGGTGGTCAGGCAATGGTCAGGAATGCTCAGATATAAATG
AGTGTGCCTTGGGCATAGACAACTGCGACACAGAGGCCACCTGCACCAAT
GAACCCGGGTCATTCTTCTGTACTTGTAATGAGGGATTCACCGGAAATGG
CGTCACATGTAGAGATATTGATGAGTGTGGATCTAACACCGACAGCTGCC
ACGACAATGCGACCTGTCACAATACGGTCGGATCGTTCCACTGTACCTGT
GATGACGGGTTCAGGGGGGATGGAGTCTCCTGTTCAGATATCAACGAGTG
CTCGGAACAAAGTGATGATTGTGACATCAACGCCAGCTGCACCAATACCA
TCGGATCGTTCACCTGTTCCTGTAACGAGGGGTACAGAGGGAATGGCGAG
GCCTGTTCAGATATTGATGAGTGTGACGAAGGAAGTGATGCTTGCCACGA
CGACGCAACCTGCACCAACAGTGCTGGCTCCTATTCCTGCGAGTGTAACA
CCGGGTACTCCGGGGACGGCAAGACTTGCACAGATATCAACGAGTGTACG
TCGGGTACACACAACTGTGATGACAACGCAGGATGTACCAACACAAAGGG
ATCCTACAGCTGCGCCTGTAACATCGGATACCAAGGGGACTCACATGACT
GTGACGCTAACGCCGCCTGCACCAACTCGCCCGGTTCATTCACCTGTGCA
TGCAACACTGGATACCGAGGGGACGGCAACACCTGTTCGGATATAAACGA
ATGCGCCGAAAATACCGATAACTGTCATCCCGAGGCCTCTTGTACCAACA
ATCGAGGGTCCTACAGTTGTGCCTGTAACACCGGGTACTCTGGAGACGGC
GTGGTTTGTTCAGATATCGACGAGTGTACTGATGAAACAGATGCTTGTGA
TTCCAACGCCAACTGCGAGAACACTGTCGGCTCATATAATTGTAACTGCA
AGGCTGGGTTTGCAGGCAATGGTCGGATTTGTACGGATGTCCACGAGTGC
GACGCTGGCCAGGACAATTGTCACGAACATGCCACCTGTTACAACAACAT
CGGGTCATTTTCCTGCGTATGTGACGACGGCTACTCCGGGGACGGAGTCT
CTTGCACAGATAATGACGAGTGTACCTTAGGCACCCATAACTGCCACGAA
GATGGAACCTGCATCAACATGGACGGCTCTTTTACCTGTGTCTGTAACGT
GGGCTATACTGGAAACGGGGTCTACTGTACGGATGTCCAGGAATGCTTGT
TGAACCTGCATAATTGTGACGAACACGCAACGTGTATCAACATCGACGGG
GGTGTTCAATGCGTATGCAACGACGGGTGGTCAGGCAATGGTCAGGAATG
CTCAGATATAAATGAGTGTGCCTTGGGCATAGACAACTGCGACACAGAGG
CCACCTGCACCAATGAACCCGGGTCATTCTTCTGTACTTGTAATGAGGGA
TTCACCGGAAATGGCGTCACATGTAGAGATATTGATGAGTGTGGATCTAA
CACCGACAGCTGCCACGACAATGCGACCTGTCACAATACGGTCGGATCGT
TCCACTGTACCTGTGATGACGGGTTCAGGGGGGATGGAGTCTCCTGTTCA
GATATCAACGAGTGCTCGGAACAAAGTGATGATTGTGACATCAACGCCAG
CTGCACCAATACCATCGGATCGTTCACCTGTTCCTGTAACGAGGGGTACA
GAGGGAATGGCGAGGCCTGTTCAGATATTGATGAGTGTGACGAAGGAAGT
GATGCTTGCCACGACGACGCAACCTGCACCAACAGTGCTGGCTCCTATTC
CTGCGAGTGTAACACCGGGTACTCCGGGGACGGCAAGACTTGCACAGATA
TCAACGAGTGTACGTCGGGTACACACAACTGTGATGACAACGCAGGATGT
ACCAACACAAAGGGATCCTACAGCTGCGCCTGTAACATCGGATACCAAGG
GGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96240gene:BL96240Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96240_cuf4transcript:BL96240_cuf4-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96240_cuf4-E1BL96240_cuf4-E1-1564476830-354994Branchiostoma lanceolatumexon
BL96240_cuf4-E2BL96240_cuf4-E2-1564476830-354991Branchiostoma lanceolatumexon
BL96240_cuf4-E3BL96240_cuf4-E3-1564476830-354989Branchiostoma lanceolatumexon
BL96240_cuf4-E4BL96240_cuf4-E4-1564476830-354987Branchiostoma lanceolatumexon
BL96240_cuf4-E5BL96240_cuf4-E5-1564476830-354985Branchiostoma lanceolatumexon
BL96240_cuf4-E6BL96240_cuf4-E6-1564476830-354983Branchiostoma lanceolatumexon
BL96240_cuf4-E7BL96240_cuf4-E7-1564476830-354981Branchiostoma lanceolatumexon
BL96240_cuf4-E8BL96240_cuf4-E8-1564476830-354979Branchiostoma lanceolatumexon
BL96240_cuf4-E9BL96240_cuf4-E9-1564476830-354977Branchiostoma lanceolatumexon
BL96240_cuf4-E10BL96240_cuf4-E10-1564476830-354975Branchiostoma lanceolatumexon
BL96240_cuf4-E11BL96240_cuf4-E11-1564476830-354973Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000158genomeSc0000158:200352..206334 -
Properties
Property NameValue
Transcript idBL96240_cuf4
Biotypeprotein_coding