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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96228_cuf1 >transcript:BL96228_cuf1-protein ID=transcript:BL96228_cuf1-protein|Name=transcript:BL96228_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=163bp
MMLASAMWYKTENTTADTRVLNLGFVRFAIEELYISLMTVLTVLPVNLML
LQLFRMEAPLSANTSEMSIRPSKQGYFRKTLLRLSKYVAWVTVFLVSTIS
AFFVILYSMDWGKEKSDSWMKAFILSFMGSSCVMDTLQILVLAVVLAAIF
SLPFLAKPPTIQK Run BLAST on NCBI mRNA from alignment at Sc0000003:7426794..7429081+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96228_cuf1 ID=transcript:BL96228_cuf1|Name=transcript:BL96228_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2288bp|location=Sequence derived from alignment at Sc0000003:7426794..7429081+ (Branchiostoma lanceolatum)
CTTTGGTGCGAGGAAGCACCTTGCATTTTGTCATGCCTGTGCGAGAGTCA
CTTGGAGAAGTGATGACGTTGCACATCTGGCATGACAACTCTGGGGAAGG
CGACACGTCATCGTGGTTTCTCGGAAGTTTTGTCGTCAGAGATATAGAAA
AGGATGTGGCGTAAGATGGAAAAAAACCCGACCTCTTTATCGAAATTGTT
TTGAGTTTGGTCTCTTTGCTACACTACAAGAAATGTCCAACTACATCTTT
TATTCTATCTTGGCATGTTGGGTTTGAGAGATTGCAATCTGCCTTGCAAG
ATTTTGCTGGTATGAAAACTAACAACTCTCCTCTTCACAGCAACGCAAGT
GAACTTGACTGGATATGGTCTTCATTATTAAAATAATAATGGCATGTCTG
TTTCATTAGCTACTTTGCATTCCTTTCATGGAAAGAAAATGTAGCATGAC
TGAGTACAAAACACAGATTTGTACACACATGGTCCTTAGTCAAACGTTAT
GGTAATTTTTCAGATCTTACTTCACCTGCAACGACTGGTTATCGTCAGAA
AAAGGGGACGGTGAAGTGCAGAAGGTGGTTCACGCAAGCACCGAGGAGGA
ACTGACATCCTTCACCAATGCCTTCAACGAGGCAAGCAGAGATGTGTTCT
ACGACAAACATGTGTGGGCGTCTGCCCTTGTAGCAGCGCCGGGTAAGTTA
AGGAATAAAAGGAACTGTCAATAGATACGTTTAAGAAGAAATCATATTGA
TTGAAAAGATCAAAGGTAATGGAAATGCATCATCAAATTTAGTGTAATAT
AATCTATGAAAAGGCTATGTGTGCCTAACCTTATTTTTCATGTATGTCTC
TGTCCGGAGTAGGTTTCAGCTTCACCCAGGCCCAGCGTCTGTCCTGCTGC
TTTACTCTACTGAACACCATGATGCTGGCCAGCGCCATGTGGTACAAGAC
AGAAAACACAACTGCTGACACAAGAGTGTTGAACCTGGGGTTCGTTCGTT
TCGCAATAGAGGTGATGTTTATCTCTTCAGCGTACTTTATATATAATTTT
GTTATTATAAATTCATTATTTCATCATGTTATTCTTACAGAGAGAATTCT
CATAAAATATCCTTACTTAAGCAACAGCTTTAAGTATTTATTCTGTTTGA
TGTGATTGCTTTCCAAGAAGGATTGATTTGCTTGGTGTCTTTTTGTTCAT
TACGTTTTTACAGGAGCTGTACATCAGTCTCATGACTGTACTGACGGTAC
TCCCCGTGAATCTGATGCTCTTGCAACTATTCCGCATGGAGGCGCCACTG
TCCGCTAACACCTCGGAAATGTCGATCCGCCCGTCAAAGCAAGGTATGGA
AGCAGGGATGTCAAAATTATAAAGTATTGATATGCGGATCCCTTGCACAT
CATGTTTGCCTGGGAATCTGAATAAAGGTACTTAGTTTGTTACATTTCTT
GTCATTTTACTGAAGCCTGATGGCATGTTTTAGATAAAAGTTTGGCTGTA
TGACATCCCTTCATCTTATCTTCATACCATTTATGTTGAACCTCAGGATA
TTTCCGAAAAACTCTCCTCCGCTTGTCCAAGTACGTGGCGTGGGTGACCG
TGTTCCTGGTGTCCACCATCTCTGCGTTCTTCGTCATCCTGTACAGTATG
GACTGGGGGAAGGAGAAGAGTGACTCCTGGATGAAGGCCTTCATCCTGTC
CTTCATGGGGTCCAGCTGTGTGATGGACACTCTTCAGGTAACGTCTTTTC
AAGACAACAACATAATGTTTACCTTGTGTTAGAAAACAGATAAACCTTTT
TTTCCACGATATAGCACTATCATGGCGCTGAGCATATCGTTCTAAATCGC
TAGGAACTCATCAAAAAGCGCTAATAACTTTTGGACTAGAATCAATGACA
ACAATTGAATCTATGGTACGTACATTGTTCAATGATGATTATAGCGGTAT
TCTATCCCGAAAGAAATCAAATCTGAACAAATTTAGGCTTAAAATACTAC
AAAAGATGGAGATTGTCATTTGAAGGAACAAGACATATGTATACGCCAAA
AATAATTACTCCAGCACGTGGCGTGAAAATTTTATACAGTTGCTTGAGTA
ATTATTTTTGGCGTATCTTACTACCTGGATGTCTAACTTTCATCAACGTA
TTAAGGCATATGTATGTACCGAGTATCGTAGCCAAGTGGTAAATATCTAC
CCATTCCTCGTAGATCCTTGTGCTTGCTGTGGTCCTGGCTGCCATCTTTA
GCCTCCCGTTCCTCGCCAAGCCACCGACTATTCAGAAG Coding sequence (CDS) from alignment at Sc0000003:7426794..7429081+ >transcript:BL96228_cuf1 ID=transcript:BL96228_cuf1|Name=transcript:BL96228_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1956bp|location=Sequence derived from alignment at Sc0000003:7426794..7429081+ (Branchiostoma lanceolatum)
ATGATGCTGGCCAGCGCCATGTGGTACAAGACAGAAAACACAACTGCTGA
CACAAGAGTGTTGAACCTGGGGTTCGTTCGTTTCGCAATAGAGGAGCTGT
ACATCAGTCTCATGACTGTACTGACGGTACTCCCCGTGAATCTGATGCTC
TTGCAACTATTCCGCATGGAGGCGCCACTGTCCGCTAACACCTCGGAAAT
GTCGATCCGCCCGTCAAAGCAAGGATATTTCCGAAAAACTCTCCTCCGCT
TGTCCAAGTACGTGGCGTGGGTGACCGTGTTCCTGGTGTCCACCATCTCT
GCGTTCTTCGTCATCCTGTACAGTATGGACTGGGGGAAGGAGAAGAGTGA
CTCCTGGATGAAGGCCTTCATCCTGTCCTTCATGGGGTCCAGCTGTGTGA
TGGACACTCTTCAGATCCTTGTGCTTGCTGTGGTCCTGGCTGCCATCTTT
AGCCTCCCGTTCCTCGCCAAGCCACCGACTATTCAGAAGATGATGCTGGC
CAGCGCCATGTGGTACAAGACAGAAAACACAACTGCTGACACAAGAGTGT
TGAACCTGGGGTTCGTTCGTTTCGCAATAGAGGAGCTGTACATCAGTCTC
ATGACTGTACTGACGGTACTCCCCGTGAATCTGATGCTCTTGCAACTATT
CCGCATGGAGGCGCCACTGTCCGCTAACACCTCGGAAATGTCGATCCGCC
CGTCAAAGCAAGGATATTTCCGAAAAACTCTCCTCCGCTTGTCCAAGTAC
GTGGCGTGGGTGACCGTGTTCCTGGTGTCCACCATCTCTGCGTTCTTCGT
CATCCTGTACAGTATGGACTGGGGGAAGGAGAAGAGTGACTCCTGGATGA
AGGCCTTCATCCTGTCCTTCATGGGGTCCAGCTGTGTGATGGACACTCTT
CAGATCCTTGTGCTTGCTGTGGTCCTGGCTGCCATCTTTAGCCTCCCGTT
CCTCGCCAAGCCACCGACTATTCAGAAGATGATGCTGGCCAGCGCCATGT
GGTACAAGACAGAAAACACAACTGCTGACACAAGAGTGTTGAACCTGGGG
TTCGTTCGTTTCGCAATAGAGGAGCTGTACATCAGTCTCATGACTGTACT
GACGGTACTCCCCGTGAATCTGATGCTCTTGCAACTATTCCGCATGGAGG
CGCCACTGTCCGCTAACACCTCGGAAATGTCGATCCGCCCGTCAAAGCAA
GGATATTTCCGAAAAACTCTCCTCCGCTTGTCCAAGTACGTGGCGTGGGT
GACCGTGTTCCTGGTGTCCACCATCTCTGCGTTCTTCGTCATCCTGTACA
GTATGGACTGGGGGAAGGAGAAGAGTGACTCCTGGATGAAGGCCTTCATC
CTGTCCTTCATGGGGTCCAGCTGTGTGATGGACACTCTTCAGATCCTTGT
GCTTGCTGTGGTCCTGGCTGCCATCTTTAGCCTCCCGTTCCTCGCCAAGC
CACCGACTATTCAGAAGATGATGCTGGCCAGCGCCATGTGGTACAAGACA
GAAAACACAACTGCTGACACAAGAGTGTTGAACCTGGGGTTCGTTCGTTT
CGCAATAGAGGAGCTGTACATCAGTCTCATGACTGTACTGACGGTACTCC
CCGTGAATCTGATGCTCTTGCAACTATTCCGCATGGAGGCGCCACTGTCC
GCTAACACCTCGGAAATGTCGATCCGCCCGTCAAAGCAAGGATATTTCCG
AAAAACTCTCCTCCGCTTGTCCAAGTACGTGGCGTGGGTGACCGTGTTCC
TGGTGTCCACCATCTCTGCGTTCTTCGTCATCCTGTACAGTATGGACTGG
GGGAAGGAGAAGAGTGACTCCTGGATGAAGGCCTTCATCCTGTCCTTCAT
GGGGTCCAGCTGTGTGATGGACACTCTTCAGATCCTTGTGCTTGCTGTGG
TCCTGGCTGCCATCTTTAGCCTCCCGTTCCTCGCCAAGCCACCGACTATT
CAGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:7426794..7429081 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96228_cuf1 |
| Biotype | protein_coding |
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