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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96223_cuf1 >transcript:BL96223_cuf1-protein ID=transcript:BL96223_cuf1-protein|Name=transcript:BL96223_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=134bp
VAFQPGQQCEPDTCRTPPGCVVIGTRRFYRSGTTFKHGCQQCTCQPNWNI
DCRCVQMTVRKEIRDMTSEEMKRFHEAVQELKDSGPRNAWDEFRDLYMHH
ISEAKGGASFLPWNRLFLRRVEQKLQELDCGVVL Run BLAST on NCBI mRNA from alignment at Sc0000003:5634146..5635336+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96223_cuf1 ID=transcript:BL96223_cuf1|Name=transcript:BL96223_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1191bp|location=Sequence derived from alignment at Sc0000003:5634146..5635336+ (Branchiostoma lanceolatum)
GTTGCCTTCCAGCCAGGTCAGCAGTGTGAACCTGACACCTGCCGGACTCC
ACCAGGTAGGGTCATAAGTCAAATGTCACGTAATAATATCTTTTCAAGCA
AGCAATACATTTCTTGTAAACATGAACTGATTTTGATAGTGAAACAATAC
AGAAAAATAGGCTACCTGTGTATGAAAAAAAAAAGAGTCAAAAATCGTTA
AGGCGACCACTCAGGAGACAAATGAAATCAGGTCTACATGTATGTGTACA
GTCAGTCACTAAACACAGGAATCTTAATGTGTCAAAGGGAAAAATTATAT
AAAGGACCACCAAAGAGTGGCCAGGTTATCCTTATGTAGAGGTGCTCAGT
TGCACAGGTTTGACTGCATTCTTATATTGTTTTTGACCTCATGTTTTTAA
CCCTGCAGGTTGTGTGGTGATTGGAACCAGGAGATTCTACCGGTCAGGAA
CGACCTTCAAACATGGCTGCCAGCAGTGCACATGTCAACCTAATTGGAAC
ATAGACTGCAGGTAGGTGTCACTTGTATCGTCATTTATCTAAAAATTTTA
AAGAACATTCTTATCTTATAGTCTTCTATAAGTTTAATTAGTTTTGTAGA
ATGGTTATTGTTATGTAGCAGAAGAGACCATGTGTTGTACCTTGTACAGT
TGTTGCGCAATAAAGTGTATGTTTATTGTCGTATTGAAGTCATGTACAGT
ACTTGATTGTAGGGCTGAAGAATAGATCATTATTGTAGCTGTTTCTTGTA
CAGTCAAACCTGAACTAAGCAACTACTCGAGGGACTAATACTATAGGAAA
AGTGGTTGCTGAGGATAGGTTGGAGTATGTAGAAACAGATGACGCTGTTT
AAATATGGAAGTGGTTACTCGCACCAGGTGGTTGCCCGACTAGGTTTGAC
TATATTTCTGGGCTAATTCTTTGAATATTTTTATGAATTCCTTTAGGTGT
GTGCAAATGACAGTAAGAAAGGAGATTCGAGACATGACCAGTGAAGAAAT
GAAGCGATTCCACGAAGCTGTCCAAGAACTGAAGGATTCTGGTCCCCGGA
ACGCGTGGGACGAGTTCCGCGACCTCTACATGCACCACATCTCGGAAGCG
AAAGGGGGCGCTTCTTTCTTGCCGTGGAACCGTCTGTTTCTGCGCCGAGT
GGAACAGAAGCTTCAAGAACTGGACTGCGGTGTTGTCTTAC Coding sequence (CDS) from alignment at Sc0000003:5634146..5635336+ >transcript:BL96223_cuf1 ID=transcript:BL96223_cuf1|Name=transcript:BL96223_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1206bp|location=Sequence derived from alignment at Sc0000003:5634146..5635336+ (Branchiostoma lanceolatum)
GTTGCCTTCCAGCCAGGTCAGCAGTGTGAACCTGACACCTGCCGGACTCC
ACCAGGTTGTGTGGTGATTGGAACCAGGAGATTCTACCGGTCAGGAACGA
CCTTCAAACATGGCTGCCAGCAGTGCACATGTCAACCTAATTGGAACATA
GACTGCAGGTGTGTGCAAATGACAGTAAGAAAGGAGATTCGAGACATGAC
CAGTGAAGAAATGAAGCGATTCCACGAAGCTGTCCAAGAACTGAAGGATT
CTGGTCCCCGGAACGCGTGGGACGAGTTCCGCGACCTCTACATGCACCAC
ATCTCGGAAGCGAAAGGGGGCGCTTCTTTCTTGCCGTGGAACCGTCTGTT
TCTGCGCCGAGTGGAACAGAAGCTTCAAGAACTGGACTGCGGTGTTGTCT
TAGTTGCCTTCCAGCCAGGTCAGCAGTGTGAACCTGACACCTGCCGGACT
CCACCAGGTTGTGTGGTGATTGGAACCAGGAGATTCTACCGGTCAGGAAC
GACCTTCAAACATGGCTGCCAGCAGTGCACATGTCAACCTAATTGGAACA
TAGACTGCAGGTGTGTGCAAATGACAGTAAGAAAGGAGATTCGAGACATG
ACCAGTGAAGAAATGAAGCGATTCCACGAAGCTGTCCAAGAACTGAAGGA
TTCTGGTCCCCGGAACGCGTGGGACGAGTTCCGCGACCTCTACATGCACC
ACATCTCGGAAGCGAAAGGGGGCGCTTCTTTCTTGCCGTGGAACCGTCTG
TTTCTGCGCCGAGTGGAACAGAAGCTTCAAGAACTGGACTGCGGTGTTGT
CTTAGTTGCCTTCCAGCCAGGTCAGCAGTGTGAACCTGACACCTGCCGGA
CTCCACCAGGTTGTGTGGTGATTGGAACCAGGAGATTCTACCGGTCAGGA
ACGACCTTCAAACATGGCTGCCAGCAGTGCACATGTCAACCTAATTGGAA
CATAGACTGCAGGTGTGTGCAAATGACAGTAAGAAAGGAGATTCGAGACA
TGACCAGTGAAGAAATGAAGCGATTCCACGAAGCTGTCCAAGAACTGAAG
GATTCTGGTCCCCGGAACGCGTGGGACGAGTTCCGCGACCTCTACATGCA
CCACATCTCGGAAGCGAAAGGGGGCGCTTCTTTCTTGCCGTGGAACCGTC
TGTTTCTGCGCCGAGTGGAACAGAAGCTTCAAGAACTGGACTGCGGTGTT
GTCTTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5634146..5635336 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96223_cuf1 |
| Biotype | protein_coding |
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