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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96212_cuf3 >transcript:BL96212_cuf3-protein ID=transcript:BL96212_cuf3-protein|Name=transcript:BL96212_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=127bp
RCPCGCNEDDGLMILCAVCDFWQHGVCFKVIREEDAPERHICDVCADTAT
PDKYPTDPYLASLSPVKVQATCLWRRALLACTEAPRLLIPSFARRLGVEM
NVAHGLVNRLEKEGFVKNAARGKRLGK Run BLAST on NCBI mRNA from alignment at Sc0000003:4992294..4993969+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96212_cuf3 ID=transcript:BL96212_cuf3|Name=transcript:BL96212_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1676bp|location=Sequence derived from alignment at Sc0000003:4992294..4993969+ (Branchiostoma lanceolatum)
CGCTGTCCCTGTGGGTGTAACGAGGATGACGGACTGATGATCCTGTGTGC
CGTCTGCGACTTCTGGCAGCACGGCGTCTGCTTCAAGGTCATCCGAGAGG
AGGATGCTCCGGAGAGACACATCTGTGACGTCTGCGCAGACGTAAGGGCT
AAAGATATGCAGGATGATTGATGGATTAAAGGATGGATTAAAGGATGGAT
GGAATGATGGATGGATGGATGGATGGATGGATGGATGGTTTAATCAATCA
ATCAATCAATCAATGACTTCTACATGTTGTGAGCCTCTATCCATTACTTA
TTTCAAACCTTTAAAAGATAACCATTTCTAGAAACAATTTTACAGAACAC
CTGTAGAATAATGAAAGAAGCAACCAGTCATAGAAGTATATTAAAAACTT
TCTAGTTTTATTTTTAGATATTGCCCCTAGATGTATCCAGTAAAACAACT
TGTACAAACTAGTGATAATGTGTAAAGTAGAAATAATGGTATTGGTAATG
GTACTTAATGTTAAGAAAATAACTTTTATTTTATTTTACATCCTCAGACT
GCAACCCCAGACAAGTATCCAACAGACCCCTACCTGGCCAGCCTCTCTCC
AGTCAAAGTACAGGTTAGTAGTTAGCATGATAGAGATTTCAACTACATGT
AGTATCTTTGTCAGGAAGGTTACTACATGTATGTTGTCGTTATCATTTGT
ATCATTTCTCTTTGTCGTATTGGGATATAATTATCACAACAAGGATGCAT
TCTTTGCAGTCACATTTCGGACCACATCAAAGTTGCCTTGTCGCTTTGTC
ACATATGTCTGCATGTCACGGTAATATAAGCTAGGAGGTCATGTTTTAAG
AATGCATCCTTGTGATGATTTTATTACAATACATTACAACAAAGAAAAAG
CAGCTGCTGCCAAAACGTTGGCAGGGAAAAGATAATGTTTTCTACCAAAG
AAAACTACATGTACTGGACATATGCTTGTTGCGGGTCCCTTGATTTTCTT
CTTACACCTTTAGGCCACCTGTCTGTGGCGTCGTGCCCTCCTGGCCTGTA
CAGAGGCCCCCCGGCTCCTGATCCCCAGCTTTGCCAGGAGACTCGGCGTC
GAGATGAACGTGGCGCACGGACTCGTCAACAGATTGGAGAAGGAAGGCTT
CGTGAAAAACGCAGCAAGAGGGAAAAGGTAACTTCATTTTACTATTCATC
TATGTGATCTTCTTGTCATCAGTGTGGCGCAATGATTAAGCTATTCCCTT
GGGCAAGGCACTTGCAGTGACCAGGGCTGTGTCCAAGACCTGTCCCTCTG
TCCCAGGATGGAAATTTGCTTGTTGGAATGGAAAAAAATTCACTCCATTT
GCCCCCAAAAAATCAAACATTGAGTGGGTATAAAAGAAAATTAAAGCCCG
AGTAACACCCACCGAGGGTTGTATCTATGTAATTGATGAACCACATCGAA
TAAGAGGTCACCTCTATTTGACTTTGTAGAATTTCTTTGAACTGCTAGCT
CCTTTTATCATGACTTGCTAGAAAACATGAAGGTGTTAAAGAAGCTCAAA
GCTGTAAGCTATGAGTGAATGCCTGACAAGCCTTAATCCCAAAGGCTTGA
CCTAAAAACTACCCTGCTGTTAGATCTAGAAAGAGTCCTGAAACACTTTT
CCATTTTTCTTCAGGCTTGGTAAGAC Coding sequence (CDS) from alignment at Sc0000003:4992294..4993969+ >transcript:BL96212_cuf3 ID=transcript:BL96212_cuf3|Name=transcript:BL96212_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1524bp|location=Sequence derived from alignment at Sc0000003:4992294..4993969+ (Branchiostoma lanceolatum)
CGCTGTCCCTGTGGGTGTAACGAGGATGACGGACTGATGATCCTGTGTGC
CGTCTGCGACTTCTGGCAGCACGGCGTCTGCTTCAAGGTCATCCGAGAGG
AGGATGCTCCGGAGAGACACATCTGTGACGTCTGCGCAGACACTGCAACC
CCAGACAAGTATCCAACAGACCCCTACCTGGCCAGCCTCTCTCCAGTCAA
AGTACAGGCCACCTGTCTGTGGCGTCGTGCCCTCCTGGCCTGTACAGAGG
CCCCCCGGCTCCTGATCCCCAGCTTTGCCAGGAGACTCGGCGTCGAGATG
AACGTGGCGCACGGACTCGTCAACAGATTGGAGAAGGAAGGCTTCGTGAA
AAACGCAGCAAGAGGGAAAAGGCTTGGTAAGCGCTGTCCCTGTGGGTGTA
ACGAGGATGACGGACTGATGATCCTGTGTGCCGTCTGCGACTTCTGGCAG
CACGGCGTCTGCTTCAAGGTCATCCGAGAGGAGGATGCTCCGGAGAGACA
CATCTGTGACGTCTGCGCAGACACTGCAACCCCAGACAAGTATCCAACAG
ACCCCTACCTGGCCAGCCTCTCTCCAGTCAAAGTACAGGCCACCTGTCTG
TGGCGTCGTGCCCTCCTGGCCTGTACAGAGGCCCCCCGGCTCCTGATCCC
CAGCTTTGCCAGGAGACTCGGCGTCGAGATGAACGTGGCGCACGGACTCG
TCAACAGATTGGAGAAGGAAGGCTTCGTGAAAAACGCAGCAAGAGGGAAA
AGGCTTGGTAAGCGCTGTCCCTGTGGGTGTAACGAGGATGACGGACTGAT
GATCCTGTGTGCCGTCTGCGACTTCTGGCAGCACGGCGTCTGCTTCAAGG
TCATCCGAGAGGAGGATGCTCCGGAGAGACACATCTGTGACGTCTGCGCA
GACACTGCAACCCCAGACAAGTATCCAACAGACCCCTACCTGGCCAGCCT
CTCTCCAGTCAAAGTACAGGCCACCTGTCTGTGGCGTCGTGCCCTCCTGG
CCTGTACAGAGGCCCCCCGGCTCCTGATCCCCAGCTTTGCCAGGAGACTC
GGCGTCGAGATGAACGTGGCGCACGGACTCGTCAACAGATTGGAGAAGGA
AGGCTTCGTGAAAAACGCAGCAAGAGGGAAAAGGCTTGGTAAGCGCTGTC
CCTGTGGGTGTAACGAGGATGACGGACTGATGATCCTGTGTGCCGTCTGC
GACTTCTGGCAGCACGGCGTCTGCTTCAAGGTCATCCGAGAGGAGGATGC
TCCGGAGAGACACATCTGTGACGTCTGCGCAGACACTGCAACCCCAGACA
AGTATCCAACAGACCCCTACCTGGCCAGCCTCTCTCCAGTCAAAGTACAG
GCCACCTGTCTGTGGCGTCGTGCCCTCCTGGCCTGTACAGAGGCCCCCCG
GCTCCTGATCCCCAGCTTTGCCAGGAGACTCGGCGTCGAGATGAACGTGG
CGCACGGACTCGTCAACAGATTGGAGAAGGAAGGCTTCGTGAAAAACGCA
GCAAGAGGGAAAAGGCTTGGTAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:4992294..4993969 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96212_cuf3 |
| Biotype | protein_coding |
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