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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96203_cuf0 >transcript:BL96203_cuf0-protein ID=transcript:BL96203_cuf0-protein|Name=transcript:BL96203_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=247bp
MNKTRVVIVAVCLLDVDECAKEDDVTSCHDDAECVNTLGSYLCECKTGYM
GDGTDCLAISAWTPWSPWSQCTETCGHPANTRVRVCTHPESGMRCDGPSV
EQGTCKGLPPCPVDGGWTVWSPWAPCTALCGGTKQRARTCDNPVPAHGGR
YCQGDVYQREQCQPGPACAVDGGWTPWATWSACSVTCSVGRRLRTRSCTN
PTPRYGGRYCAGGDAQQEKCGEHNPECYAVDAVWGEWSEWSECSHTC Run BLAST on NCBI mRNA from alignment at Sc0000301:150007..153522- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96203_cuf0 ID=transcript:BL96203_cuf0|Name=transcript:BL96203_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3516bp|location=Sequence derived from alignment at Sc0000301:150007..153522- (Branchiostoma lanceolatum)
AACGCGTTCTAAGAACGTACTCAGCTATGACGTAAATTATCACATTTCCC
GGACACCCTGTGACGTAGGCAGTTTGTGTGGGTCGATCGATGTCAACACC
AATTCAGTCAGAAAGCGAGTTTGGGGTATTTCAACATAAATGAATAAAAC
ACGAGTTGTTATTGTTGCTGTTTGCCTCCTAGATGTTGATGAGTGCGCGA
AGGAAGATGACGTGACCAGTTGCCATGACGACGCGGAGTGCGTCAACACG
CTGGGGTCGTACCTGTGCGAGTGCAAAACCGGGTACATGGGAGATGGCAC
GGACTGTTTGGGTGAGAAATAACTCATTGAATAATTGATAATTAACAAAC
AGCAATAAAAGTTTTGGGTATTTATATATATATATTGTATAACCAGTATA
ACCACCCTTTGACGTAACAGAGACGCTTACGAAAAAAAAACCGTAAACTA
CCCGGGAGGGCATCGGTTTGGAAATGTATCAGAGCGCCGACCTAGATCGA
ACCTACCTTGGAAATGTGCCTGAGGCATAACATTACATAGAACGACCTGT
TACGCCTAAATCATGAACAGCATATCTAAATACAATTATTGCTGGAAGCT
ATCTAGTATTTAAACATCTACTTGGTAACAATGAGGTTTACTCTGCTAAA
GGTCTCGAAAAAATATAGATTTTTGACACGTCGATTCTGGATTGGTAACT
CTGGTATTTGGAACCTTCTTGTTCTTTTCTGAGCTGGTGTTAAATATTGG
TAGCTGGTACGTCCACATACATTGGATTTGTTTGGAATGGATGGCATTTC
AGCACCTGGAACAGGTCCGTCAGAAACCACACATTTGGCCTTTGGGAGAT
GACGGGACAACTGATGCTGCATTAGCATCTCTTTAGATTCACCGTTTCTG
TTAAGGTGGCGGTCTTAGGATACACTACGGAATTCTGAGAGTTGACGTTA
CAATGTGCGACTGTAACGTTACGTTACGAGAGTGTTATAAGTGTTTTTAT
GATTTTCCTAGCCATAAGCGCGTGGACGCCGTGGTCGCCCTGGTCCCAGT
GTACGGAGACGTGCGGCCACCCTGCCAACACACGGGTCCGGGTCTGTACC
CACCCCGAGAGCGGCATGAGGTGTGACGGGCCCTCCGTGGAACAGGGCAC
CTGTAAGGGGCTCCCGCCATGTCCAGGTGGGCTTTAGAACTCATAGATAC
ATTTCCTGATATTAATTTTTTTTTATGTATGTGTTGTGAAATAAAAAGTA
CGGAAATAATTAAAACTACAGGACCTTATGCTTTTGCCATACAATTGTTG
TCCCATACGCAACAACGTTAACGATATGAATATACATCATTTATGCATAT
CATTTAAGGAAGATATGACCGTATTTTTGTATTCATCTATACTAGTCCAT
TTCCGTCTGTCAGTGAATTGACGTTGGTGGGACAGTAAACACAGGTAGTT
GGAAAACTTGGATTTGGTCGATCATTGATTTGTCAATTCTGTCTGTATGG
TTGAAAGCTGTAACTATCGACATTCAGATCGGTGATCTGTATAAATCATT
GTTTGATTGATTTATTAATTGATTATTGCCGTTCTCGCAGTGGACGGTGG
GTGGACGGTGTGGTCTCCCTGGGCGCCCTGCACGGCCCTCTGCGGGGGCA
CCAAGCAGCGGGCCCGGACGTGTGACAACCCCGTCCCGGCACACGGCGGT
CGGTACTGCCAGGGGGACGTCTACCAGAGGGAGCAGTGTCAGCCCGGGCC
GGCATGTGCAGGTAAGGCCGGGGCACATTCATCGGGCTTTACGACGGCAA
ACTGGGGCCATTTTGGGGACAATCGACGTGGATGACATAGACCTCTGTCA
ATGGGAGAAATGATCTAAGGATCTAGGAAGCACAAAAAAGTTGTCACATT
GGCTAGGTGGTCCTTAAAATGTAGAGGTAGTCACTTAAAGGCCTTGCCAC
TTATGGAAACCAAGAGGCCGAGTGCAATTGCCATTGCAGAAGTTTGACTT
TTACTGACTCTCTGAGTTAGAGACACTGGAATTGAATATGAACACTTAGA
AAAAAATGATGCTTGATAGGGCAATGTAGAGTGAAATATGTACTTCTTGT
TTGGACAATAGATGATAATGATGAAAGGGCCCTGTTAATATAGAAGTGGT
CACTTGACAGGTTTGACTGTATCTAATTTGAATAAGTGCATATATAAATG
AGTTATCTTTCCATGATGACCGGCAGTTGATGGCGGCTGGACACCGTGGG
CTACTTGGTCAGCTTGTTCAGTGACGTGTTCAGTGGGAAGGAGACTAAGG
ACCCGGTCGTGCACCAACCCCACACCCCGGTACGGCGGGCGGTACTGCGC
AGGCGGCGACGCACAGCAGGAGAAGTGCGGGGAACACAACCCAGAGTGCT
ATGGTAAGTAGTGCAGTCAAACCCTTTAGTTCAATGCTTAGAAGTGGCCA
CCTACGGCCTTGCATTGAGCGAGATCGTTAAAAAAAACCCTCGTCAGGCA
ACCACCTGGCACAGGCAACCATCCCCAGTCACAAGCCACATTAAAACAGT
CCCGTCCATTTTTATATAGTTAACCCCACCCTGTCCTGAGCAACCACCTG
TCCTCAGCTACAATTTTTCTTCAGTCCCTGGAGTGGTTGCTGAATACAGG
TTTGACTGTACCTCCATGGCCAGCATCCATTGTTTTAAATGCTCTGAATA
TCAGTGAACACAGTGGTCGGTATAGACAGGATTCTTAATGCTCGGGTCAA
TGGCAGATATAATTTTAAAAAAAAAGTGGCAAAATACAAGTTGATGCTTT
TCCCTCCAGAAGCTGTTGATGCAGTGTGGGGTGAAGTGAGTGTAGTTACA
CGTGTGGCCGTAAACCAGTTTTTATGTCCTACTTCATCAATGGATTGGTT
AGTCATTTGAACCCTTTTGCTCTGGTATCCGTAGCCGTAGCCTTGGTGTG
TGGAGAGTGGAGTGAGTGTTGCTACATGTGCTGCCCAGGGACCTGACTTT
CTATGTCGAGGCCATGTCCTACATAGTTGCTCACCTATCCTGAACAGATT
GGTGTTTATCATAGTAAATTTAACCCTTTTACTCCCATAGCTGTTGACGC
GGCGTGGGGAGAGTGGAGCGAGTGTAGCCACACGTGCGGCCTATGGACCT
GATTTCTATGTTGTCTGGCCATGTCCTACATAGTAGCTCACCGATCCTGA
ACGGCTTATGAGTTGTAGTATTCTAGTAGGAACTTTTCATATTTCATCCT
CTATAAACACGTTGAAACCCCTGAACGGATTGGTGTTTATGACTAAATCT
AACCCTTTTCCTCCCAAAGCTGTTGACGCAGTGTGGGGAGAGTGGAGCGA
GTGTAGCCACACGTCTGGCCTGTGTTGTCAGGCCATGTCATTTATAGTCG
CTCACCTATCCTGCAGATTAGTGTTTATTATACTAAATTCAACCCTTTTC
CTGCCGTAGCTGTTGACGCGGTGTGGGGAGAGTGGAGCGAGTGGAGTGAG
TGTAGCCACACGTGCG Coding sequence (CDS) from alignment at Sc0000301:150007..153522- >transcript:BL96203_cuf0 ID=transcript:BL96203_cuf0|Name=transcript:BL96203_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=3705bp|location=Sequence derived from alignment at Sc0000301:150007..153522- (Branchiostoma lanceolatum)
ATGAATAAAACACGAGTTGTTATTGTTGCTGTTTGCCTCCTAGATGTTGA
TGAGTGCGCGAAGGAAGATGACGTGACCAGTTGCCATGACGACGCGGAGT
GCGTCAACACGCTGGGGTCGTACCTGTGCGAGTGCAAAACCGGGTACATG
GGAGATGGCACGGACTGTTTGGCCATAAGCGCGTGGACGCCGTGGTCGCC
CTGGTCCCAGTGTACGGAGACGTGCGGCCACCCTGCCAACACACGGGTCC
GGGTCTGTACCCACCCCGAGAGCGGCATGAGGTGTGACGGGCCCTCCGTG
GAACAGGGCACCTGTAAGGGGCTCCCGCCATGTCCAGTGGACGGTGGGTG
GACGGTGTGGTCTCCCTGGGCGCCCTGCACGGCCCTCTGCGGGGGCACCA
AGCAGCGGGCCCGGACGTGTGACAACCCCGTCCCGGCACACGGCGGTCGG
TACTGCCAGGGGGACGTCTACCAGAGGGAGCAGTGTCAGCCCGGGCCGGC
ATGTGCAGTTGATGGCGGCTGGACACCGTGGGCTACTTGGTCAGCTTGTT
CAGTGACGTGTTCAGTGGGAAGGAGACTAAGGACCCGGTCGTGCACCAAC
CCCACACCCCGGTACGGCGGGCGGTACTGCGCAGGCGGCGACGCACAGCA
GGAGAAGTGCGGGGAACACAACCCAGAGTGCTATGCTGTTGACGCGGTGT
GGGGAGAGTGGAGCGAGTGGAGTGAGTGTAGCCACACGTGCATGAATAAA
ACACGAGTTGTTATTGTTGCTGTTTGCCTCCTAGATGTTGATGAGTGCGC
GAAGGAAGATGACGTGACCAGTTGCCATGACGACGCGGAGTGCGTCAACA
CGCTGGGGTCGTACCTGTGCGAGTGCAAAACCGGGTACATGGGAGATGGC
ACGGACTGTTTGGCCATAAGCGCGTGGACGCCGTGGTCGCCCTGGTCCCA
GTGTACGGAGACGTGCGGCCACCCTGCCAACACACGGGTCCGGGTCTGTA
CCCACCCCGAGAGCGGCATGAGGTGTGACGGGCCCTCCGTGGAACAGGGC
ACCTGTAAGGGGCTCCCGCCATGTCCAGTGGACGGTGGGTGGACGGTGTG
GTCTCCCTGGGCGCCCTGCACGGCCCTCTGCGGGGGCACCAAGCAGCGGG
CCCGGACGTGTGACAACCCCGTCCCGGCACACGGCGGTCGGTACTGCCAG
GGGGACGTCTACCAGAGGGAGCAGTGTCAGCCCGGGCCGGCATGTGCAGT
TGATGGCGGCTGGACACCGTGGGCTACTTGGTCAGCTTGTTCAGTGACGT
GTTCAGTGGGAAGGAGACTAAGGACCCGGTCGTGCACCAACCCCACACCC
CGGTACGGCGGGCGGTACTGCGCAGGCGGCGACGCACAGCAGGAGAAGTG
CGGGGAACACAACCCAGAGTGCTATGCTGTTGACGCGGTGTGGGGAGAGT
GGAGCGAGTGGAGTGAGTGTAGCCACACGTGCATGAATAAAACACGAGTT
GTTATTGTTGCTGTTTGCCTCCTAGATGTTGATGAGTGCGCGAAGGAAGA
TGACGTGACCAGTTGCCATGACGACGCGGAGTGCGTCAACACGCTGGGGT
CGTACCTGTGCGAGTGCAAAACCGGGTACATGGGAGATGGCACGGACTGT
TTGGCCATAAGCGCGTGGACGCCGTGGTCGCCCTGGTCCCAGTGTACGGA
GACGTGCGGCCACCCTGCCAACACACGGGTCCGGGTCTGTACCCACCCCG
AGAGCGGCATGAGGTGTGACGGGCCCTCCGTGGAACAGGGCACCTGTAAG
GGGCTCCCGCCATGTCCAGTGGACGGTGGGTGGACGGTGTGGTCTCCCTG
GGCGCCCTGCACGGCCCTCTGCGGGGGCACCAAGCAGCGGGCCCGGACGT
GTGACAACCCCGTCCCGGCACACGGCGGTCGGTACTGCCAGGGGGACGTC
TACCAGAGGGAGCAGTGTCAGCCCGGGCCGGCATGTGCAGTTGATGGCGG
CTGGACACCGTGGGCTACTTGGTCAGCTTGTTCAGTGACGTGTTCAGTGG
GAAGGAGACTAAGGACCCGGTCGTGCACCAACCCCACACCCCGGTACGGC
GGGCGGTACTGCGCAGGCGGCGACGCACAGCAGGAGAAGTGCGGGGAACA
CAACCCAGAGTGCTATGCTGTTGACGCGGTGTGGGGAGAGTGGAGCGAGT
GGAGTGAGTGTAGCCACACGTGCATGAATAAAACACGAGTTGTTATTGTT
GCTGTTTGCCTCCTAGATGTTGATGAGTGCGCGAAGGAAGATGACGTGAC
CAGTTGCCATGACGACGCGGAGTGCGTCAACACGCTGGGGTCGTACCTGT
GCGAGTGCAAAACCGGGTACATGGGAGATGGCACGGACTGTTTGGCCATA
AGCGCGTGGACGCCGTGGTCGCCCTGGTCCCAGTGTACGGAGACGTGCGG
CCACCCTGCCAACACACGGGTCCGGGTCTGTACCCACCCCGAGAGCGGCA
TGAGGTGTGACGGGCCCTCCGTGGAACAGGGCACCTGTAAGGGGCTCCCG
CCATGTCCAGTGGACGGTGGGTGGACGGTGTGGTCTCCCTGGGCGCCCTG
CACGGCCCTCTGCGGGGGCACCAAGCAGCGGGCCCGGACGTGTGACAACC
CCGTCCCGGCACACGGCGGTCGGTACTGCCAGGGGGACGTCTACCAGAGG
GAGCAGTGTCAGCCCGGGCCGGCATGTGCAGTTGATGGCGGCTGGACACC
GTGGGCTACTTGGTCAGCTTGTTCAGTGACGTGTTCAGTGGGAAGGAGAC
TAAGGACCCGGTCGTGCACCAACCCCACACCCCGGTACGGCGGGCGGTAC
TGCGCAGGCGGCGACGCACAGCAGGAGAAGTGCGGGGAACACAACCCAGA
GTGCTATGCTGTTGACGCGGTGTGGGGAGAGTGGAGCGAGTGGAGTGAGT
GTAGCCACACGTGCATGAATAAAACACGAGTTGTTATTGTTGCTGTTTGC
CTCCTAGATGTTGATGAGTGCGCGAAGGAAGATGACGTGACCAGTTGCCA
TGACGACGCGGAGTGCGTCAACACGCTGGGGTCGTACCTGTGCGAGTGCA
AAACCGGGTACATGGGAGATGGCACGGACTGTTTGGCCATAAGCGCGTGG
ACGCCGTGGTCGCCCTGGTCCCAGTGTACGGAGACGTGCGGCCACCCTGC
CAACACACGGGTCCGGGTCTGTACCCACCCCGAGAGCGGCATGAGGTGTG
ACGGGCCCTCCGTGGAACAGGGCACCTGTAAGGGGCTCCCGCCATGTCCA
GTGGACGGTGGGTGGACGGTGTGGTCTCCCTGGGCGCCCTGCACGGCCCT
CTGCGGGGGCACCAAGCAGCGGGCCCGGACGTGTGACAACCCCGTCCCGG
CACACGGCGGTCGGTACTGCCAGGGGGACGTCTACCAGAGGGAGCAGTGT
CAGCCCGGGCCGGCATGTGCAGTTGATGGCGGCTGGACACCGTGGGCTAC
TTGGTCAGCTTGTTCAGTGACGTGTTCAGTGGGAAGGAGACTAAGGACCC
GGTCGTGCACCAACCCCACACCCCGGTACGGCGGGCGGTACTGCGCAGGC
GGCGACGCACAGCAGGAGAAGTGCGGGGAACACAACCCAGAGTGCTATGC
TGTTGACGCGGTGTGGGGAGAGTGGAGCGAGTGGAGTGAGTGTAGCCACA
CGTGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000301 | genome | Sc0000301:150007..153522 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96203_cuf0 |
| Biotype | protein_coding |
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