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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96201_cuf0 >transcript:BL96201_cuf0-protein ID=transcript:BL96201_cuf0-protein|Name=transcript:BL96201_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=135bp
LDLYKQLRLPTCVATTWTGDIIVADRNPHSIKIFDRRGNFLKQIPVKGFG
YSPVRLCVDAQGNIVALHHSYGYFHITVFRPDGSTLVTSQGMKKMFYDFD
MTPDGHPVVTTTDEHTVLYFSQLIRTGSKDNNLQL Run BLAST on NCBI mRNA from alignment at Sc0000042:1695551..1701586- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96201_cuf0 ID=transcript:BL96201_cuf0|Name=transcript:BL96201_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=6036bp|location=Sequence derived from alignment at Sc0000042:1695551..1701586- (Branchiostoma lanceolatum)
CTGGACCTCTACAAACAGCTGCGGCTCCCCACCTGCGTCGCCACCACGTG
GACAGGTTTGTTTTATTTGTTTGTTCGTTTGTTTGTTTGTTCCAGCATTT
CAGAATTTTTATTTTTTAAATTTTTTTTATTTGTCAGAAATTACTCGCAA
TGGCAGCCTTTCTAGCGCTGAATTGATGCAGGGTTTACAGGTTTCACACA
ATACACAACATATACATATACATATCTTATCCACACTTGCATTATGTGGA
ATTGTCGCAAGGGTCTGGGCGGCTGCCATTCGGCGCCACCAGGTGACCTC
AATACGACCTTCCCCAACGGAAGTCAGGTACCCATTTACACCTGGGTGGA
GTGAGGAAAGTCGTGTTAAGTGCCTTTCCCAAGGGCACAAGATCGGTGAC
ATGACAGGATTCGAACTCTGGACCTTTTGGTTCTGAGCCGAACGCTCTGC
TGTTGCGCCACACAACCCCACAATTTGTTTTACATTGATACCTACAATCA
CTGTGCTTTTCATTGATGTAAAAGTTTGTTGTTTAAAATCCTGTAGTTAG
CTATATAGGAATTTTGGTTCATCACAATTTTGAACTCTTGAAACTGCTTT
ATTTTATGTTGTGCAATTTTTTCTATGCACCTAAATCTTTAGGTTAGGAC
ACACCAAATTGATACGTTGGTTCTCGGATTAAAAAAAAATAATGCTTTTG
ATTAATAACTGTAGAATCATCATGAAAACATACTGTATAGTCTGAGGGTG
AAGTCTGTACACAGTATCAGATTCAAGGTTTCCTCTATAATTATAATTTT
GATAAGAAATGTCTAAGAACCAAGGAAATAAATTGGTGTGGCCTGATGTG
TTCTTGTTTAGAGGTTTGTATGCTTTAGTATCATGGTCTTGTGGTACCTG
TGTGTGGACTTAACATCCCTCATTCCTCCCTCTCTCAGGTGATATCATCG
TGGCCGACCGCAATCCTCACAGCATCAAAATCTTCGACCGGCGGGGAAAC
TTCCTGAAGCAGATCCCGGTGAAGGGGTTCGGCTACTCACCAGTGCGACT
GTGCGTGGACGCACAGGGGAACATCGTGGCCCTGCACCACAGCTACGGGT
ACTTCCACATCACTGTGTTCCGTCCCGATGGGTCAACACTCGTCACATCT
CAGGTAAATGTAGAATGCAACATGGTGTATTCTGTATCGCCCAAGTTACC
AGCTCGACCCACGACTTTGGAACACCTCGGTCATAGGAATCTGAAGTTAT
CTGGTGGTGGCATTGTAAATGTAAGAACTTGTTTACATTTCAAAAACGTC
TAGACAATTTTTTAATTCCATTTTGCCAACAAAGCTTACCAGTTGTGTTA
ACAACTACGTACCAGACTAGATGAAAGGTAATTAAAGACTTTCCTCTCGA
TCTTCCAGGGAATGAAGAAGATGTTCTACGATTTCGATATGACGCCCGAC
GGACACCCGGTTGTCACGACGACGGACGAACACACCGTTCTGTACTTCAG
CCAGCTCATCAGAACAGGGAGCAAGGATAACAACTTGCAGCTGTAACCAA
GAATCACAAAAAAACTCCCATGGAAACTTTGTCATCGGCTTTGAATCTAT
AACATGACACCCAACGTTCATCCGGTAGTCATGACGACGGATGAGCACAC
TGTGCTGTACTTCTGTGAACTCCTACGGACAGGGAGTGTATTTATAATGA
CAATTTCCAGCTGTAACCAAGAAGCACAAAGCTCCAAAATGGGTGAAGGA
ACGGAAACTTTGTCATCGCCCTGGAGGACGTCATGCCTTAACGCCAACTC
GGGAAAACTCTAGAGATTTTTCTGTGGAAAAAATGATAGTTTGGACACCA
GAAATCCTGGAGCTGACGTTACAAACAGAAGTAAACCGTGTAGATGTGTG
GAAAAGTCCACGTGTTGCAGTAGTGCATATAGGTAGGTGGGATACATTGG
TTAGTTCAGTTCAGTTCAAGTTTTACACAATTTGTTGCATACTGTTGTTA
CTGGTATCTTTGTGCAGTTACGTTTTATTTGTGGGCCAGCACTTGGATTT
AGGAATTACATTTGTTTGGTTCTTTTGAATACAGTTTTTGAATTGTCATA
AGTAAGGCAAAGTGCAATGTTTGCTATCCTTCCATTTGCAAAACTATCAC
GCACTGCATTTGGTCACAGTTCACACTTGTAGTAGTTTATAACTAAGTTA
AAGGCTTTAACTACAGTTGCCACCAGTAAGAGGGTTAGCACACCATGTGA
CTGATTTATAAAACACATTTCCCTTTGCCCAAGTGACCTTTGACTTCTTG
AGAAATAAGATTAGCCTCCAAAGAGGATTAAGGACTCNATTAGCTACCAA
ATAGGATTAAGGACTCAGTAATCTCACCAGCTTGGAAAACTGGTTTTCTA
CTTTTTTGCCTCGCGGGGGTGAATCTGTAATAATCTTCTTTCGAAAATCT
CTTCTGATTTAAAGCTCAAATGTCTGATTTTGTGTCTGTTAACTTTGGAG
CACCTCAGTTGTAGGAGTTTGAAATTATCTGGTAGTGGAATTATCAATGT
TGCATTCTTCAAACTGAGAGGATTCAGTTTGGTTGTTAAAGGATTCGTTG
CCATGTAAATGAATTCAAAGCTTTTACATTCAGAAGAAGTTAGGATAACT
TTTAATCACATTTTGCCCCCTGAGCTTACCAGTTAAGAATCAACAACTTG
CTGACCTCGTGAAGGGTTAAGGAGATTATCTCTCACCTGAGCAGTTTTTG
CTCTAAGCCAGTTGAAGGAAAAGTGACAAAACTCAATTTCTGGACAGTTG
AAACTCTAATCTTCTTATCTTTGATAAACCCGGCTTTTCTTATAAGTTAG
TAGGTCTGGGACAGATCAAGGAAATTGGAACAAAATTCCAGCTTAATCTG
AGAAATAATCCGAGAGCTTACAGTTGTGCCTTTTGTGATGCAAAACTATC
TACCAGAAGGAGATAACGTGGAGTCTTTTAAAGTATGTAATACGGTCACC
AACTTCTCAGTACAGTTTGACAGGCCTCAAAATAGCTGTGCATCTAATTT
TTGACTGTGGGTGCACCAGTGCACCTAGATATTTTTTTAGGCTTTAAGGT
AAGGGTACTATTGTACACTAGTATACAGAAAATACTCTTGAAATGTAAGC
ATCTTGACTTGCTTGACTTTTAGACAGAATAGCTAAAATTACCTTTCGTT
GTATTCTACTTGATGTATCTAGTTAGCTATAGAATTACAGATTGTAGTTC
TTATGAGCGTAATTTTGTTTTGCTGACATTCAACTTTATTTTATGTGGTG
TTTCTGTGCACCTAATTTTTTTGGTCGGGTGCACCAGTGCACCTATTTCC
AAAAATGAATTTCGAGCCCTGGTTTTAGGTACAGTGAGGCCACACACAAT
TAATTTGTTGGCTCTCTTTTTGCAAGAATAAATCACAAAAGGGCTTGGGT
GAAAACTTGTACCTGACTCTGTTCACGCCCCGAAACTGTGTGCACCAAAG
TACAGACTTTCCCCTCAGATTATGTTTTCATGTAGATTTTTCAACCTAAC
ATTATTTTCTGAATCCGAGACAGAAGGAATTGTATTGATATGGCCTAAAC
TATATGGATCTAGGGCATTGTGGGCAGGCCTAGGTGTATTACTGTGTACT
TTCACCCTCTAATCAGATTGTCAAAGCTTAGCCTTGAGCAACAAAGCTGT
CAAAAGTTTTGTTGGGAAATAAGGAGATTTTTAAGTCTGATCCTGGAAGT
TGAGGGTTACTTTCAGTACTGTAGAAGGGGAAATGTTAGCCGTTTATGTT
CATGTTTTTGTGCATACTCTTTTTAGCCCAACATTTTCCATTTTTACAGC
AAATGTTGAAATTGTTCTTATGGTAGAAGAAGACACATGTACAATCATTT
ATGCTTTTGACTTAGTACAAAAAGAGATGTGAGAAGCTTGGATAGGAAGG
ATGATGCAGATTATAATGTAGGAACAATACGTGTACATTGAGAAATGTTT
AACAATCTTAAGTTGCATTTCTCTTCTGTAAGAAAAAGATTCTCAAACTT
GGAAAAAGAAGGTGACGTCCATATCATTCATTAACTAAGGAGATCTCAAG
AAAAATATTTAGCCTATTTTTAGGGCAGAAAAAAACACAACAGGAAGAAC
AAGGGAAGGAAGGAAGGCAAAAAAATGACTTAATGGGTGGAAAGAAGTTA
TGGAGGCGGTAAAATTACATGTAGATATAAAGCACTTTTCTTTGAAGTGA
ATTCTTCAAGTATAACAAGTATTAATCACATAAAAACTTAGATGATATAC
TTTTCATTTACAAGTGGAAGAAGAAAGAACTTACAAACATGAATGTTTGT
ATGATTTAGCTAAACGATTGGGTGTGAATTGGTTTAGAATATAAGGAGTT
GAGAAGGGGTTGAGCCTGTAGCATGCATTTATGATATAATCTTTTAGACA
CTAGAGAAGTTTTGAAGTGTGGAAGCTAATGTTGCAAAGAGAAGGAATGT
GGAACCGTTTGAGAAGGGGTTTTCAAGTTTTGAGATGGAAAGGGAAAAAG
GAGGGAGCTTTGACTGATTTTGTTTTTGTGGAAATTATAGTGTGATGTAA
ACTATGAAAGAAAAGTTAGGAAAAGTGCCTTAGAAAATGACGAAAGCTTT
GTAAAAGGCTTTGTTAAATCATGACATGGAGGAAGTTACGTATAATTGGA
GTGTGAAAAAGCAAAACACAGGAGTGAAATAGAGTGAATAGCTTTAGGGG
TGTTAAAAAGTAATATGTAATAATCACTATATATGGAAATTTGCATTGAA
GATGCAATGGAGCTAATGTATTGGTCGACATTGTGTGACTTTTGGTACAT
TTTGTGGATTAAATGGAATTGATTTGTGCACTGGACCTATCAGAGCCTTT
GGAAAGACACAAAAACACAGTATGAAACGAAAACAAGAAGCACGTACTGT
GATTTTGTTTCTTCCAAGACTGGCTCTTTCTAATGCACAATCAAGGTTGG
GGAAGTCACATGATGTATATTAAGGAGTATCATAAAGGTTGAAAAGCGCT
GTTGGTTGTACGGTTTAAATTTACAGGTATTTTACTTTTTCAAACTACCA
CATTTTTCAAATGTTTAGAAGCTGGTGACACAATGCAGTTTTGTTCTCTT
CATTATTTTAGTCAATGTAACAAGTTTTAGCCACTGGCAAATGATTTTCA
GTACTGCTGTTTTCATACTTTGTGTACATGTGATGTACATGTTTTAGTTT
CCAGTCTTTATTTTGTTGTCACAGCACAATGTCTGATTCAGGTAGGTGTA
CCACCTGACCATAACTTATACTTCATTTCTAATGTGTGTAGTTATTTTAT
TTTTGATAAGACGGTGTAGTTTTCAGTGTAAATCCACACATCACATTTGT
TCCATGGGATTAGGGAAGCTACCTGGCACTCAGGTTATTATAGGAGAAAG
AAATTATGTTTTCTAGAAATAGAAATCTGTCGTGTATTTTATAAGGAGAC
AGTAGAACTGTCTTTATATTCTATTCCTCAACTGTCTGTGTCCTTGTCTG
GCACTTTTATGCCAAAGAGACATGCCAGGCCACACCAATTTAATTTCTTG
GTTCTTAAAAACTTTAAAGTGAAATTTTAGCAAGTTAGAGGACATTGAAA
ACAGACGTCTGGGAGGAGAACTATATTTATCCCCTGAATCTGTGTGCACC
AAGTTACAGCCTTTCCTGTTTTCATCTTGATCTTCCAGAGTTTTTTTTTT
TTAAATCCAAGAATCCAGTAAATTAAAGTGCTGTGGCCTAAGTTATCTGT
GTATCGTGTACATTCTACATTTGTATCTGCCAAACCACTGTTATTACATG
TGTGTACTCATTATGTTGCATTAGAACATCCTGTTTTCTTCAGTTGTGAT
TAAGGTGATCTTAATGCCTTTTTTTATGTTTCTCAACTTTTCTCACCGTT
TGACCTGGTAATGACTCTTTTTATGAGTATATGGGTTTCCCCTGTGTTTT
TGTAAGTTTCTAATAAAGTGAAAAGATGAAATAGCG Coding sequence (CDS) from alignment at Sc0000042:1695551..1701586- >transcript:BL96201_cuf0 ID=transcript:BL96201_cuf0|Name=transcript:BL96201_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1224bp|location=Sequence derived from alignment at Sc0000042:1695551..1701586- (Branchiostoma lanceolatum)
CTGGACCTCTACAAACAGCTGCGGCTCCCCACCTGCGTCGCCACCACGTG
GACAGGTGATATCATCGTGGCCGACCGCAATCCTCACAGCATCAAAATCT
TCGACCGGCGGGGAAACTTCCTGAAGCAGATCCCGGTGAAGGGGTTCGGC
TACTCACCAGTGCGACTGTGCGTGGACGCACAGGGGAACATCGTGGCCCT
GCACCACAGCTACGGGTACTTCCACATCACTGTGTTCCGTCCCGATGGGT
CAACACTCGTCACATCTCAGGGAATGAAGAAGATGTTCTACGATTTCGAT
ATGACGCCCGACGGACACCCGGTTGTCACGACGACGGACGAACACACCGT
TCTGTACTTCAGCCAGCTCATCAGAACAGGGAGCAAGGATAACAACTTGC
AGCTGTAACTGGACCTCTACAAACAGCTGCGGCTCCCCACCTGCGTCGCC
ACCACGTGGACAGGTGATATCATCGTGGCCGACCGCAATCCTCACAGCAT
CAAAATCTTCGACCGGCGGGGAAACTTCCTGAAGCAGATCCCGGTGAAGG
GGTTCGGCTACTCACCAGTGCGACTGTGCGTGGACGCACAGGGGAACATC
GTGGCCCTGCACCACAGCTACGGGTACTTCCACATCACTGTGTTCCGTCC
CGATGGGTCAACACTCGTCACATCTCAGGGAATGAAGAAGATGTTCTACG
ATTTCGATATGACGCCCGACGGACACCCGGTTGTCACGACGACGGACGAA
CACACCGTTCTGTACTTCAGCCAGCTCATCAGAACAGGGAGCAAGGATAA
CAACTTGCAGCTGTAACTGGACCTCTACAAACAGCTGCGGCTCCCCACCT
GCGTCGCCACCACGTGGACAGGTGATATCATCGTGGCCGACCGCAATCCT
CACAGCATCAAAATCTTCGACCGGCGGGGAAACTTCCTGAAGCAGATCCC
GGTGAAGGGGTTCGGCTACTCACCAGTGCGACTGTGCGTGGACGCACAGG
GGAACATCGTGGCCCTGCACCACAGCTACGGGTACTTCCACATCACTGTG
TTCCGTCCCGATGGGTCAACACTCGTCACATCTCAGGGAATGAAGAAGAT
GTTCTACGATTTCGATATGACGCCCGACGGACACCCGGTTGTCACGACGA
CGGACGAACACACCGTTCTGTACTTCAGCCAGCTCATCAGAACAGGGAGC
AAGGATAACAACTTGCAGCTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1695551..1701586 - |
Properties
| Property Name | Value |
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| Transcript id | BL96201_cuf0 |
| Biotype | protein_coding |
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