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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96186_cuf2 >transcript:BL96186_cuf2-protein ID=transcript:BL96186_cuf2-protein|Name=transcript:BL96186_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=198bp
GVSFSDVTTPSQDSTQRVQTVGRYNDSSAWVGFNGSWYIFSGNTRVSWDD
ANLNCQNLSANLVSIQSQEEQSFINDFIMRITSIGAGNGTSKQNNTMYCD
PYENITIGLLCRRDPASCSWSDGSRLVYENWEGRPNPHGNNRCGTINMTD
GRWKISPCSSARPFICERDSAHVNMSASPFDGCGVHSSCARNENDELY Run BLAST on NCBI mRNA from alignment at Sc0000086:972545..974805- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96186_cuf2 ID=transcript:BL96186_cuf2|Name=transcript:BL96186_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2261bp|location=Sequence derived from alignment at Sc0000086:972545..974805- (Branchiostoma lanceolatum)
GGGGTATCTTTTAGTGACGTCACAACTCCAAGTCAAGACTCGACACAACG
AGTTCAAACTGGTAAGGCCTGCCAATGTTTACTGAAGCTACATTTTCTTG
TTGTTGTTCTGTTGTGGTTGCAGCCATATTCCTATCAAAATGTCAACAAA
GTAGAGATGATACATTACTTAGTGAACCGAAAGGCATTATGCTGTCGGGC
TAGATTTTCAAGATGGCGCCTGACCTTTGTAAACCATGACCTCTGTCAGA
TCCTCCCCCATAGATATCTAATGTTCAAAATGCCTATATGGATATCCTCC
AAAACCCATGTGCCGTTTTGCAATATTCGAAGGCCTTTATGACTCATGTT
TCGACTAAAAAAATGAAAAAATGATGTGAAATACTGTAGTAATTGGTTTT
GTATGTGCATTCAATGATTTATGTGTCAGTTACGTAGTAATTACATTGTT
ACCCACTGATTTTTCTTAACTAAATCTACCTCAAATTAAATAGTTCTCAT
GCAATCTTGAATCATAAAGCGACAGACTTTGATATGAAATCTTTACTTGC
GGATACACTGTTTTGATTCGAAACTTAGGTCCACTTCCTAACAACAACAC
TTCGGTACAGTTTGCGTATATTATAGGTCATACTGTCAACTGCCTTTAAT
TAAGATAAATTCTCTTTTTTTCCTCCTTTCCATTTTGTGGTGGATTCAAA
TATACAAAAACACATCCCCCCTCCTTATTCAGTAGGTCGCTATAACGACA
GTAGCGCCTGGGTTGGATTCAACGGTAGCTGGTATATTTTCTCCGGGAAT
ACAAGGGTGTCTTGGGACGACGCCAACCTCAATTGTCAAAACTTGTCAGC
GAATCTGGTCAGTATACAGTCACAGGAAGAGCAGAGCTTCATCAATGGTG
AGTACAATTACCAATCAGGAGCCCCATTTTGCGATTAAATCAAATACATT
GAATAGTTTATTTCAATTGGCAAGAGAGCTTCTTGAGATCACTTGAACTT
TCCACCAGAGCTCGATGTACTGATCGAAAAGGATGTAAAGAGTTTGCCAT
GAGGTATCATATAGTCATAGTAATTTAATAGAATGCTAGAATATCTTTTA
ATAGATACCCATCATAACGTTTACTTGAATACACTTCTAAGAAATGATTG
TAAGACTGTTACGTAAATAATGGCGCGTTGTATGACTTTAAAAGCTTACT
TTTTTTATCATCTTACAGATTTCATAATGCGCATAACAAGCATTGGGGCA
GGGAATGGTACATCAAAGCAGAACAATACAATGTATTGTGATCCATGTAC
GTATTAATCGACTTAATTACCTAGCATGCATATGAGTACAAAAACATGGG
TATAGAGTATTCTAGATTCTAGATATGGTCGTAGGTATACATGAAGCTAT
TAGACATCAGCTTGCTAATTTAGTCGATGTAACGTTACGTAAAAATAATA
CCTCAAAGGCGGGTCATGACATTACGCTAGTATTGGACCTCGCCCAGTCT
AGGTCTTTTATCAATATCAGATATTTTGCCGCTTGTTGTAAGATTTAGCT
AACAGAAGAGGATGGAATCCCAGACTTTGTTTCTGGAATCAACCGCACTT
AATTGAAATAGGATTTAAAGTATCACAAATTGCTAAAACCATTCATTGAA
GCGACATATACACTTTAAACTACACCTTTCTTATTTACTTGCAGATGAAA
ATATAACGATTGGGCTGTTATGCAGACGAGATCCTGCCTCCTGCTCTTGG
AGTGACGGCTCGAGATTGGTAAGAAAACGTTCTTACGTGCTCAAAAACAA
ATTTTTAACTACGTAAATACATTTGCTTTTAATTCTAGAAATGTTGCAAT
TATATCGTTTGTTTACACTCTTATGGGCCGATCCCAAAGCACCGTACATA
ACATAAAGATGCAAATATTTGGCCGACATGCAGTCATTCTCTCATTGGTC
GTTCAGATAATTACCATGTCGTCATTGGTTGAACTGCTAATTGTGATGGA
CAGTCCGGATCAGTTTATAAATAAAACCTCACACCTGTTTGTCAGGTTTA
CGAGAACTGGGAAGGTCGGCCCAACCCACATGGAAACAACAGGTGTGGCA
CAATCAACATGACCGACGGGAGGTGGAAGATTTCTCCCTGCAGCAGCGCC
AGACCGTTCATCTGTGAGAGAGACTCGGCACATGTCAACATGTCCGCCTC
CCCCTTCGATGGATGTGGAGTTCATTCGTCATGCGCTAGAAATGAAAACG
ACGAGTTGTAC Coding sequence (CDS) from alignment at Sc0000086:972545..974805- >transcript:BL96186_cuf2 ID=transcript:BL96186_cuf2|Name=transcript:BL96186_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=2970bp|location=Sequence derived from alignment at Sc0000086:972545..974805- (Branchiostoma lanceolatum)
GGGGTATCTTTTAGTGACGTCACAACTCCAAGTCAAGACTCGACACAACG
AGTTCAAACTGTAGGTCGCTATAACGACAGTAGCGCCTGGGTTGGATTCA
ACGGTAGCTGGTATATTTTCTCCGGGAATACAAGGGTGTCTTGGGACGAC
GCCAACCTCAATTGTCAAAACTTGTCAGCGAATCTGGTCAGTATACAGTC
ACAGGAAGAGCAGAGCTTCATCAATGATTTCATAATGCGCATAACAAGCA
TTGGGGCAGGGAATGGTACATCAAAGCAGAACAATACAATGTATTGTGAT
CCATATGAAAATATAACGATTGGGCTGTTATGCAGACGAGATCCTGCCTC
CTGCTCTTGGAGTGACGGCTCGAGATTGGTTTACGAGAACTGGGAAGGTC
GGCCCAACCCACATGGAAACAACAGGTGTGGCACAATCAACATGACCGAC
GGGAGGTGGAAGATTTCTCCCTGCAGCAGCGCCAGACCGTTCATCTGTGA
GAGAGACTCGGCACATGTCAACATGTCCGCCTCCCCCTTCGATGGATGTG
GAGTTCATTCGTCATGCGCTAGAAATGAAAACGACGAGTTGTACGGGGTA
TCTTTTAGTGACGTCACAACTCCAAGTCAAGACTCGACACAACGAGTTCA
AACTGTAGGTCGCTATAACGACAGTAGCGCCTGGGTTGGATTCAACGGTA
GCTGGTATATTTTCTCCGGGAATACAAGGGTGTCTTGGGACGACGCCAAC
CTCAATTGTCAAAACTTGTCAGCGAATCTGGTCAGTATACAGTCACAGGA
AGAGCAGAGCTTCATCAATGATTTCATAATGCGCATAACAAGCATTGGGG
CAGGGAATGGTACATCAAAGCAGAACAATACAATGTATTGTGATCCATAT
GAAAATATAACGATTGGGCTGTTATGCAGACGAGATCCTGCCTCCTGCTC
TTGGAGTGACGGCTCGAGATTGGTTTACGAGAACTGGGAAGGTCGGCCCA
ACCCACATGGAAACAACAGGTGTGGCACAATCAACATGACCGACGGGAGG
TGGAAGATTTCTCCCTGCAGCAGCGCCAGACCGTTCATCTGTGAGAGAGA
CTCGGCACATGTCAACATGTCCGCCTCCCCCTTCGATGGATGTGGAGTTC
ATTCGTCATGCGCTAGAAATGAAAACGACGAGTTGTACGGGGTATCTTTT
AGTGACGTCACAACTCCAAGTCAAGACTCGACACAACGAGTTCAAACTGT
AGGTCGCTATAACGACAGTAGCGCCTGGGTTGGATTCAACGGTAGCTGGT
ATATTTTCTCCGGGAATACAAGGGTGTCTTGGGACGACGCCAACCTCAAT
TGTCAAAACTTGTCAGCGAATCTGGTCAGTATACAGTCACAGGAAGAGCA
GAGCTTCATCAATGATTTCATAATGCGCATAACAAGCATTGGGGCAGGGA
ATGGTACATCAAAGCAGAACAATACAATGTATTGTGATCCATATGAAAAT
ATAACGATTGGGCTGTTATGCAGACGAGATCCTGCCTCCTGCTCTTGGAG
TGACGGCTCGAGATTGGTTTACGAGAACTGGGAAGGTCGGCCCAACCCAC
ATGGAAACAACAGGTGTGGCACAATCAACATGACCGACGGGAGGTGGAAG
ATTTCTCCCTGCAGCAGCGCCAGACCGTTCATCTGTGAGAGAGACTCGGC
ACATGTCAACATGTCCGCCTCCCCCTTCGATGGATGTGGAGTTCATTCGT
CATGCGCTAGAAATGAAAACGACGAGTTGTACGGGGTATCTTTTAGTGAC
GTCACAACTCCAAGTCAAGACTCGACACAACGAGTTCAAACTGTAGGTCG
CTATAACGACAGTAGCGCCTGGGTTGGATTCAACGGTAGCTGGTATATTT
TCTCCGGGAATACAAGGGTGTCTTGGGACGACGCCAACCTCAATTGTCAA
AACTTGTCAGCGAATCTGGTCAGTATACAGTCACAGGAAGAGCAGAGCTT
CATCAATGATTTCATAATGCGCATAACAAGCATTGGGGCAGGGAATGGTA
CATCAAAGCAGAACAATACAATGTATTGTGATCCATATGAAAATATAACG
ATTGGGCTGTTATGCAGACGAGATCCTGCCTCCTGCTCTTGGAGTGACGG
CTCGAGATTGGTTTACGAGAACTGGGAAGGTCGGCCCAACCCACATGGAA
ACAACAGGTGTGGCACAATCAACATGACCGACGGGAGGTGGAAGATTTCT
CCCTGCAGCAGCGCCAGACCGTTCATCTGTGAGAGAGACTCGGCACATGT
CAACATGTCCGCCTCCCCCTTCGATGGATGTGGAGTTCATTCGTCATGCG
CTAGAAATGAAAACGACGAGTTGTACGGGGTATCTTTTAGTGACGTCACA
ACTCCAAGTCAAGACTCGACACAACGAGTTCAAACTGTAGGTCGCTATAA
CGACAGTAGCGCCTGGGTTGGATTCAACGGTAGCTGGTATATTTTCTCCG
GGAATACAAGGGTGTCTTGGGACGACGCCAACCTCAATTGTCAAAACTTG
TCAGCGAATCTGGTCAGTATACAGTCACAGGAAGAGCAGAGCTTCATCAA
TGATTTCATAATGCGCATAACAAGCATTGGGGCAGGGAATGGTACATCAA
AGCAGAACAATACAATGTATTGTGATCCATATGAAAATATAACGATTGGG
CTGTTATGCAGACGAGATCCTGCCTCCTGCTCTTGGAGTGACGGCTCGAG
ATTGGTTTACGAGAACTGGGAAGGTCGGCCCAACCCACATGGAAACAACA
GGTGTGGCACAATCAACATGACCGACGGGAGGTGGAAGATTTCTCCCTGC
AGCAGCGCCAGACCGTTCATCTGTGAGAGAGACTCGGCACATGTCAACAT
GTCCGCCTCCCCCTTCGATGGATGTGGAGTTCATTCGTCATGCGCTAGAA
ATGAAAACGACGAGTTGTAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:972545..974805 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96186_cuf2 |
| Biotype | protein_coding |
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