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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96174_evm1 >transcript:BL96174_evm1-protein ID=transcript:BL96174_evm1-protein|Name=transcript:BL96174_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=327bp
MATILVTAYRDGYPYVFTPENDTTASPEGCAVAVRKVVHEVLEKNKNGAV
LFRGLPLQTAEDFSRVVNNLGLKLIGYEGGSGVRSEIAKAVNTASDEPPE
FCIEPHNEMVYTSHFPEKVIFFCLDPPSPGAGGETVIADVREILPRLDKD
VVDKFEKLGVMYWHHMPTHTPGGYHSWQKAFLTEDKAAVEKHMMKNDTSW
RWEDGDLSWWITLPSKFKYRGEKLWFCSVHGNNASYFKAHPLWFNKDLPD
HQFPFTTYYGDGTDIEAEVLQHIRDVHWQVSMGFQMQKGDLLVLNNMYCQ
HARLGFTGKRKLAVALAKQDQDYPEDF Run BLAST on NCBI mRNA from alignment at xpSc0039810:8239..12073- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96174_evm1 ID=transcript:BL96174_evm1|Name=transcript:BL96174_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3835bp|location=Sequence derived from alignment at xpSc0039810:8239..12073- (Branchiostoma lanceolatum)
ATGGCCACCATACTAGTGACAGCCTACAGGTGTGGGCGGTCACGCAGTGT
CCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGCCACGCAT
CAACGTCATTTGGCACCGAAGTCAACCTCGTGGAGACCCACGTTGACTGG
GCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGCAGGAAGTGGCT
ACCTGGCTAAGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGG
ACGGCTACCCGTACGTCTTCACACCCGAGAATGACACGACTGCCTCTCCT
GAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACACGAGGTGCTGGAGAA
GAACAAGAATGGGGCGGTACTGTTTCGTGGTCTGCCCCTGCAAACGGCAG
AAGATTTCTCCCGTGTGGTCAATAACCTGGGCCTGAAGTTGATTGGTTAT
GAAGGGGGGTCTGGAGTCAGGAGTGAGATCGCGAAGGCAGTGAACACAGC
GAGCGACGAGCCGCCCGAGTTTTGTATCGAGCCTCACAATGAGATGGTAT
ACACTTCACACTTCCCTGAAAAGGTTAGTGAAGCATAGAAAGAAAGCATA
ACCATATAGGAGCCTTTAGCGTACAGCAGGTCTGCAGGTGTGATTGTTTT
TTTTCCATGGAGATATTGTTTTGAGCGTGTTTGTTTGTGTGTGTGTGTGT
GTGCGTGTGTGCGTGTGTGTGTGTGTTTGCGTGCGTGTTTGTGTATGTGT
CCGGATGCTTGTAGTCAGCAGAACTCGAGAACGTCTGGATGGATTGTAAA
GATATTTGATATGGGGGTAGGTGTTAGGAGAACAAAGGCCAAGGTCGATT
TTGGGCCCCCTGGTATGAGACACTAGAACTGCATTGGCGTTTTTGTCAAA
ATCTTCCAAGGGGAATAACTGAAGAAAGAACGGAACGACAGATTTCCATG
TTATTTAATATGTAGGTAGATTGGACAGATATGTACACAAGGAAATGCAA
ATTATGCAAATTGGGACTTACTTTGCATAATTAATGAGAAAAACTTATAT
TTCCATTCTAGGTATGCTGTGACAGCTGGCACCTGTTACTTTCGAAACTG
GGTCAAGTATTCCCCAGGGGCCCCACAGCAAGTGGTCAAAACACAAAGGG
ATATACAGCCAAACTTGTTGACTTGTTTTTATTATGTGGATAACTTAAGT
GCTACTTGATGTAATGAAATGTTAATCATGCAAATCAGAATCTAATTAGC
ATACTTAATAGGGAATGTTATAAACTCACTCCATTCAATGGTACGACAGT
TCAGAAATGCAACATATCAAACTGAGAAATAAAGTGAAATTGATAGATAG
AAGTTATTCAAATAAATACCTAATTTGCATAATTAATGAGAAAAGATTGT
AATTCCATATAAGTAGGTAACTGGAATTCTATACTTGTGGTATTGAAGTT
ATATGACAGTGAACATGGTTGGATATAAATACCTAATTTGCATAGTATAC
ATTATTATTGAATAAGATGATTACCTTCAAAAGAGCAACAAAAACTAGTT
TGCTACTCATTCACGACATGTGTTCTGAAATGGATGTTACGTATAGCAAG
TAACAAAAAATTTCATTTGTGAAATTTACATCACGATTTTCAGGTCATAT
TTTTCTGCCTGGACCCTCCGTCTCCTGGTGCTGGTGGCGAGACTGTGATC
GCAGACGTGCGGGAAATCCTGCCCCGTCTGGACAAGGACGTCGTGGACAA
GTTTGAGAAGCTCGGAGTGATGTACTGGCATCACATGCCCACCCATACCC
CTGGAGGATACCACTCTTGGCAAAAGGTACAACCTGATTATTAATTGATT
TCATTAAATCACCGACACGACGAACATCAAATCAACAAGAGAATCACCTT
TTCACTACCGAAGAAGAAGATATTTATCTCCATAAAATGGAGATGTAGGT
TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
GTGATTCCGGACGATTGTAGTCAGCATAACTCTAGAACCTTTGCATGGAT
TATGATGTAGGTGTTTGGAAGACAAAAATCAAAGTCGATTTTGCCCCCCC
CCCCTGGTATGTGACCTCAGTACTGCAGGAGAACCTTGACATGCTATGGT
CTTGATTTTTTGAGCTTGTGATGTAAGAAAGAAGTGGTGTAGTTTTGGGG
CGGTTTTAAAAATCTCCAGCTCCAAAGGAGAATAATTGAACAAAGGAACG
ACGAATTTCCTTGATATGCTTGTAGCTTAGAAAGAGATGTACATGATGAA
GTGAAAATCATGCAAATTGGGACTTAATTTGTGGAATGATGAAATTCTAT
ACCTGCAGTGCTTTCCATAATAGGACTCAGATACATGTAACATATGTAGT
TTATGGCAGGGGGAACATAGACAGATACCAATTATGCAAATACGTTCATA
ATGTGCATAATTAATCTAAAAGCGCCATGATTTATCTAATAGTAAATGAC
GGGACTGTCAATGTTTGCGACATGTATGAATAAGTTAAAGGTGTACGTGA
CCAAGCATATATTATGTAGATGTTTAAGTCATTTGCATAATCAGAATAGT
TACAGGAGATATGAGGTCTCCAAACTCTTGTTTTGACATGTAATTATACG
ATATACATCTTCAGGCGTTCCTGACCGAGGACAAAGCTGCTGTAGAGAAG
CATATGATGAAGAATGATACCAGCTGGAGATGGGAAGATGGCGACCTATC
CTGGTGGATCACACTGCCGTCCAAGTTCAAATACAGAGGTTAGGAAACAC
TCAGTAATACTAAGGAGGTTAACCTCCTTGATAATACACACACAAAGTGA
AAGCCAGCAATCTAAAAAGACTATGGGGGTTGAGGTTTCGTATGGAGTTT
AATAAAGATGGAAAAATCGACACGTACACTTTAGAAGGACATATTCATCA
AGAGACACTCAGTTTATACATGTAACAGCCATTTAAGAAACATAGGCAAT
GCATGTTAACCTTGGTGTTATTGCCTATTTTCCAGGAGAGAAACTGTGGT
TTTGTTCCGTCCACGGAAATAACGCATCATATTTCAAGGCCCACCCCCTC
TGGTTCAACAAGGATCTCCCCGACCACCAGTTTCCCTTCACCACCTACTA
TGGAGATGGCACCGACATTGAGGCAGAAGTTCTCCAGCATATCCGCGATG
TTCACTGGCAGGTGCGTACTAGGTACCAGAACCCAGAAGGGCAAAATTTT
CAGCCTCTGCAAATTAAGTCCCCCTCGCACCTCTGCAAAATTCTTTTTTA
GCCTCTGTGAAACAACATGTTTGCAGCCTCTGCAAAACTCTTTGTAGAGG
CTACATAACAGTTTCCTTATGGGCTTCAGTACGCAGGATTATTTCCTCGT
TCAGGACCACCCTTTTCCCGGTGACATATATTCAAACTGTCTTCTTTCCC
AGACCTATCGATAATCTCATCTACGCAAAAAGCCAGAATGAACATGAATA
ATTTGACCACTCAACTTCTGAGACGACCTTAGTTGGTTTCGTTTAGCCAT
GAAATTTTGCAGAGAGTGTGTTTAACAGAACCTTGTGAACATCACCATAA
CGTTCAAGGTCTGCGTTACGGTACACACAAGATAGCATCGAAGAAATCGT
AATTTCAACGAGAGTATGGCATTTTCTTCTTTTGACAGGTCTCCATGGGT
TTCCAGATGCAGAAGGGTGACTTACTGGTCCTGAACAACATGTACTGCCA
GCATGCCAGACTCGGCTTCACCGGGAAACGGAAGCTTGCCGTCGCGCTGG
CCAAGCAGGACCAGGACTATCCGGAGGACTTCTGA Coding sequence (CDS) from alignment at xpSc0039810:8239..12073- >transcript:BL96174_evm1 ID=transcript:BL96174_evm1|Name=transcript:BL96174_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5904bp|location=Sequence derived from alignment at xpSc0039810:8239..12073- (Branchiostoma lanceolatum)
ATGGCCACCATACTAGTGACAGCCTACAGGGACGGCTACCCGTACGTCTT
CACACCCGAGAATGACACGACTGCCTCTCCTGAAGGGTGTGCTGTCGCCG
TGCGGAAAGTAGTACACGAGGTGCTGGAGAAGAACAAGAATGGGGCGGTA
CTGTTTCGTGGTCTGCCCCTGCAAACGGCAGAAGATTTCTCCCGTGTGGT
CAATAACCTGGGCCTGAAGTTGATTGGTTATGAAGGGGGGTCTGGAGTCA
GGAGTGAGATCGCGAAGGCAGTGAACACAGCGAGCGACGAGCCGCCCGAG
TTTTGTATCGAGCCTCACAATGAGATGGTATACACTTCACACTTCCCTGA
AAAGGTCATATTTTTCTGCCTGGACCCTCCGTCTCCTGGTGCTGGTGGCG
AGACTGTGATCGCAGACGTGCGGGAAATCCTGCCCCGTCTGGACAAGGAC
GTCGTGGACAAGTTTGAGAAGCTCGGAGTGATGTACTGGCATCACATGCC
CACCCATACCCCTGGAGGATACCACTCTTGGCAAAAGGCGTTCCTGACCG
AGGACAAAGCTGCTGTAGAGAAGCATATGATGAAGAATGATACCAGCTGG
AGATGGGAAGATGGCGACCTATCCTGGTGGATCACACTGCCGTCCAAGTT
CAAATACAGAGGAGAGAAACTGTGGTTTTGTTCCGTCCACGGAAATAACG
CATCATATTTCAAGGCCCACCCCCTCTGGTTCAACAAGGATCTCCCCGAC
CACCAGTTTCCCTTCACCACCTACTATGGAGATGGCACCGACATTGAGGC
AGAAGTTCTCCAGCATATCCGCGATGTTCACTGGCAGGTCTCCATGGGTT
TCCAGATGCAGAAGGGTGACTTACTGGTCCTGAACAACATGTACTGCCAG
CATGCCAGACTCGGCTTCACCGGGAAACGGAAGCTTGCCGTCGCGCTGGC
CAAGCAGGACCAGGACTATCCGGAGGACTTCTGAATGGCCACCATACTAG
TGACAGCCTACAGGGACGGCTACCCGTACGTCTTCACACCCGAGAATGAC
ACGACTGCCTCTCCTGAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACA
CGAGGTGCTGGAGAAGAACAAGAATGGGGCGGTACTGTTTCGTGGTCTGC
CCCTGCAAACGGCAGAAGATTTCTCCCGTGTGGTCAATAACCTGGGCCTG
AAGTTGATTGGTTATGAAGGGGGGTCTGGAGTCAGGAGTGAGATCGCGAA
GGCAGTGAACACAGCGAGCGACGAGCCGCCCGAGTTTTGTATCGAGCCTC
ACAATGAGATGGTATACACTTCACACTTCCCTGAAAAGGTCATATTTTTC
TGCCTGGACCCTCCGTCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGA
CGTGCGGGAAATCCTGCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTG
AGAAGCTCGGAGTGATGTACTGGCATCACATGCCCACCCATACCCCTGGA
GGATACCACTCTTGGCAAAAGGCGTTCCTGACCGAGGACAAAGCTGCTGT
AGAGAAGCATATGATGAAGAATGATACCAGCTGGAGATGGGAAGATGGCG
ACCTATCCTGGTGGATCACACTGCCGTCCAAGTTCAAATACAGAGGAGAG
AAACTGTGGTTTTGTTCCGTCCACGGAAATAACGCATCATATTTCAAGGC
CCACCCCCTCTGGTTCAACAAGGATCTCCCCGACCACCAGTTTCCCTTCA
CCACCTACTATGGAGATGGCACCGACATTGAGGCAGAAGTTCTCCAGCAT
ATCCGCGATGTTCACTGGCAGGTCTCCATGGGTTTCCAGATGCAGAAGGG
TGACTTACTGGTCCTGAACAACATGTACTGCCAGCATGCCAGACTCGGCT
TCACCGGGAAACGGAAGCTTGCCGTCGCGCTGGCCAAGCAGGACCAGGAC
TATCCGGAGGACTTCTGAATGGCCACCATACTAGTGACAGCCTACAGGGA
CGGCTACCCGTACGTCTTCACACCCGAGAATGACACGACTGCCTCTCCTG
AAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACACGAGGTGCTGGAGAAG
AACAAGAATGGGGCGGTACTGTTTCGTGGTCTGCCCCTGCAAACGGCAGA
AGATTTCTCCCGTGTGGTCAATAACCTGGGCCTGAAGTTGATTGGTTATG
AAGGGGGGTCTGGAGTCAGGAGTGAGATCGCGAAGGCAGTGAACACAGCG
AGCGACGAGCCGCCCGAGTTTTGTATCGAGCCTCACAATGAGATGGTATA
CACTTCACACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGACCCTCCGT
CTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGACGTGCGGGAAATCCTG
CCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGAGTGAT
GTACTGGCATCACATGCCCACCCATACCCCTGGAGGATACCACTCTTGGC
AAAAGGCGTTCCTGACCGAGGACAAAGCTGCTGTAGAGAAGCATATGATG
AAGAATGATACCAGCTGGAGATGGGAAGATGGCGACCTATCCTGGTGGAT
CACACTGCCGTCCAAGTTCAAATACAGAGGAGAGAAACTGTGGTTTTGTT
CCGTCCACGGAAATAACGCATCATATTTCAAGGCCCACCCCCTCTGGTTC
AACAAGGATCTCCCCGACCACCAGTTTCCCTTCACCACCTACTATGGAGA
TGGCACCGACATTGAGGCAGAAGTTCTCCAGCATATCCGCGATGTTCACT
GGCAGGTCTCCATGGGTTTCCAGATGCAGAAGGGTGACTTACTGGTCCTG
AACAACATGTACTGCCAGCATGCCAGACTCGGCTTCACCGGGAAACGGAA
GCTTGCCGTCGCGCTGGCCAAGCAGGACCAGGACTATCCGGAGGACTTCT
GAATGGCCACCATACTAGTGACAGCCTACAGGGACGGCTACCCGTACGTC
TTCACACCCGAGAATGACACGACTGCCTCTCCTGAAGGGTGTGCTGTCGC
CGTGCGGAAAGTAGTACACGAGGTGCTGGAGAAGAACAAGAATGGGGCGG
TACTGTTTCGTGGTCTGCCCCTGCAAACGGCAGAAGATTTCTCCCGTGTG
GTCAATAACCTGGGCCTGAAGTTGATTGGTTATGAAGGGGGGTCTGGAGT
CAGGAGTGAGATCGCGAAGGCAGTGAACACAGCGAGCGACGAGCCGCCCG
AGTTTTGTATCGAGCCTCACAATGAGATGGTATACACTTCACACTTCCCT
GAAAAGGTCATATTTTTCTGCCTGGACCCTCCGTCTCCTGGTGCTGGTGG
CGAGACTGTGATCGCAGACGTGCGGGAAATCCTGCCCCGTCTGGACAAGG
ACGTCGTGGACAAGTTTGAGAAGCTCGGAGTGATGTACTGGCATCACATG
CCCACCCATACCCCTGGAGGATACCACTCTTGGCAAAAGGCGTTCCTGAC
CGAGGACAAAGCTGCTGTAGAGAAGCATATGATGAAGAATGATACCAGCT
GGAGATGGGAAGATGGCGACCTATCCTGGTGGATCACACTGCCGTCCAAG
TTCAAATACAGAGGAGAGAAACTGTGGTTTTGTTCCGTCCACGGAAATAA
CGCATCATATTTCAAGGCCCACCCCCTCTGGTTCAACAAGGATCTCCCCG
ACCACCAGTTTCCCTTCACCACCTACTATGGAGATGGCACCGACATTGAG
GCAGAAGTTCTCCAGCATATCCGCGATGTTCACTGGCAGGTCTCCATGGG
TTTCCAGATGCAGAAGGGTGACTTACTGGTCCTGAACAACATGTACTGCC
AGCATGCCAGACTCGGCTTCACCGGGAAACGGAAGCTTGCCGTCGCGCTG
GCCAAGCAGGACCAGGACTATCCGGAGGACTTCTGAATGGCCACCATACT
AGTGACAGCCTACAGGGACGGCTACCCGTACGTCTTCACACCCGAGAATG
ACACGACTGCCTCTCCTGAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTA
CACGAGGTGCTGGAGAAGAACAAGAATGGGGCGGTACTGTTTCGTGGTCT
GCCCCTGCAAACGGCAGAAGATTTCTCCCGTGTGGTCAATAACCTGGGCC
TGAAGTTGATTGGTTATGAAGGGGGGTCTGGAGTCAGGAGTGAGATCGCG
AAGGCAGTGAACACAGCGAGCGACGAGCCGCCCGAGTTTTGTATCGAGCC
TCACAATGAGATGGTATACACTTCACACTTCCCTGAAAAGGTCATATTTT
TCTGCCTGGACCCTCCGTCTCCTGGTGCTGGTGGCGAGACTGTGATCGCA
GACGTGCGGGAAATCCTGCCCCGTCTGGACAAGGACGTCGTGGACAAGTT
TGAGAAGCTCGGAGTGATGTACTGGCATCACATGCCCACCCATACCCCTG
GAGGATACCACTCTTGGCAAAAGGCGTTCCTGACCGAGGACAAAGCTGCT
GTAGAGAAGCATATGATGAAGAATGATACCAGCTGGAGATGGGAAGATGG
CGACCTATCCTGGTGGATCACACTGCCGTCCAAGTTCAAATACAGAGGAG
AGAAACTGTGGTTTTGTTCCGTCCACGGAAATAACGCATCATATTTCAAG
GCCCACCCCCTCTGGTTCAACAAGGATCTCCCCGACCACCAGTTTCCCTT
CACCACCTACTATGGAGATGGCACCGACATTGAGGCAGAAGTTCTCCAGC
ATATCCGCGATGTTCACTGGCAGGTCTCCATGGGTTTCCAGATGCAGAAG
GGTGACTTACTGGTCCTGAACAACATGTACTGCCAGCATGCCAGACTCGG
CTTCACCGGGAAACGGAAGCTTGCCGTCGCGCTGGCCAAGCAGGACCAGG
ACTATCCGGAGGACTTCTGAATGGCCACCATACTAGTGACAGCCTACAGG
GACGGCTACCCGTACGTCTTCACACCCGAGAATGACACGACTGCCTCTCC
TGAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACACGAGGTGCTGGAGA
AGAACAAGAATGGGGCGGTACTGTTTCGTGGTCTGCCCCTGCAAACGGCA
GAAGATTTCTCCCGTGTGGTCAATAACCTGGGCCTGAAGTTGATTGGTTA
TGAAGGGGGGTCTGGAGTCAGGAGTGAGATCGCGAAGGCAGTGAACACAG
CGAGCGACGAGCCGCCCGAGTTTTGTATCGAGCCTCACAATGAGATGGTA
TACACTTCACACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGACCCTCC
GTCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGACGTGCGGGAAATCC
TGCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGAGTG
ATGTACTGGCATCACATGCCCACCCATACCCCTGGAGGATACCACTCTTG
GCAAAAGGCGTTCCTGACCGAGGACAAAGCTGCTGTAGAGAAGCATATGA
TGAAGAATGATACCAGCTGGAGATGGGAAGATGGCGACCTATCCTGGTGG
ATCACACTGCCGTCCAAGTTCAAATACAGAGGAGAGAAACTGTGGTTTTG
TTCCGTCCACGGAAATAACGCATCATATTTCAAGGCCCACCCCCTCTGGT
TCAACAAGGATCTCCCCGACCACCAGTTTCCCTTCACCACCTACTATGGA
GATGGCACCGACATTGAGGCAGAAGTTCTCCAGCATATCCGCGATGTTCA
CTGGCAGGTCTCCATGGGTTTCCAGATGCAGAAGGGTGACTTACTGGTCC
TGAACAACATGTACTGCCAGCATGCCAGACTCGGCTTCACCGGGAAACGG
AAGCTTGCCGTCGCGCTGGCCAAGCAGGACCAGGACTATCCGGAGGACTT
CTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039810 | genome | xpSc0039810:8239..12073 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96174_evm1 |
| Biotype | protein_coding |
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