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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96172_evm1 >transcript:BL96172_evm1-protein ID=transcript:BL96172_evm1-protein|Name=transcript:BL96172_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=114bp
QRQPNIGVLTVIVLGCVALLSASSSAVDSDKKKLEVVDKLEKSLLQILTA
GVKEDQQDLSEMGKRVGCGCRWEGTAPICPDQYGCGYEEYFAGTSYCGDG
HCCIWGGRKTKCCK Run BLAST on NCBI mRNA from alignment at xpSc0039683:120671..123051+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96172_evm1 ID=transcript:BL96172_evm1|Name=transcript:BL96172_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2381bp|location=Sequence derived from alignment at xpSc0039683:120671..123051+ (Branchiostoma lanceolatum)
ACCAAAGGCAACCCAACATTGGGGTTCTTACTGTCATCGTGCTTGGATGT
GTGGCACTCCTTTCTGCTTCCAGTTCAGGTCAGCTTCAAACACATTTAAA
TCATCTAATCTCCGTTGAAACCGCAAACATTTTTTTCTCCTGTCGTGTAG
AAGAAACATGTTTTCCTCCTGCTGTGTTAGAAATATATGCTTTATTTAGA
TACATTATTTCTTTCTTTTAAAACTTGAAACTGCATATATTACTCTCTTG
AAGGAAAAAAGGCACATACATGTACCAGCATACTGAAGAATATGCAACCC
TTTCCTGAACAGGATAGGAGTCCTACATGTTAAAATTTCTAGCCATTTAT
ACCGCCTAGAGAAAACATCGATCCATGTACTTATTATAATTACTAACAGA
AACTAAATGACATATTCGCACACAACCTCGTCTTTAATTAGAGGATTTAA
CTAAAGTATCTTACCCTATACTTTTGATGAAATACCTGTTTGACTTTTCG
AGTCACTGACTGGGAAAGAGGAACGTATGTTTTCCAAAATCTATCCAGCA
GCTTGAATAACTTTCTGTCCTTTATTTCCTGGATCCGGATGTCTAACGTT
TATCGACGTAAGACATTAAGTATTTTGTAAAACCATTACTGTGGTCACCA
TGTATCGTAATCTGCATGTATAATTTTATCAACTTTTCGAATATAATATC
ATAGTCAATTCTCAAAAAAATGTTTGAAATGATTAATTTAAGTTCCGAAC
GTGCCTTTCATTGACAAAATTCAATGAACCATGCATTTTGTGACAGGAAT
GTTTGTTGAGAATCCGTTGGGTGTTTTTCATTGAAGCTGTCACTCATTGT
TAAACTGCTCAGCTGTCGACAGCGACAAGAAGAAGTTGGAAGTGGTCGAC
AAACTGGAGAAGAGTCTTCTCCAGATACTAACAGGTAATTAACTAATAAC
GTTCATGTCTTGGGCCCAGGGCTTATTGCATCGTCTTGCATGGATCGCGT
TTGTTGTAAATTACGTAACATTCATTTAGTTCATGCAACTCATGCTGGAC
TGTTGGACGATGTTGCACCAAAGTAAAGTTCGTTGCGTACAATATATTGA
CTGACATGTTGGCCAAATATTGCTAATTATCAGTTTATTTTAAATTCAGG
CAAGTGCTGTCTTTTTCCACTAATCGGATGAAGAATGATGCATATGTCTC
TCAATAACTAGTTGGCACTAATATTATATTAGCTTATTTCAAGTGTTCTC
CTTTGATGCAAAAATGCTCTGGTTCCAGCTTAATTTTATCGTTTTTGTTG
CCCATGCATCATTTGTGATTTTATTGGACGTTCACGCCACATTCATTTCC
AACAAATGTGACTTTTGCTTTAAAATGAGAGCAGTAGAACAATAGTGCGC
ATGCGCAAACTGTCGCGGTAAACACCAGTAATACTGAAACGTTATGAAAA
TGAAAGCAGTGGCATTTAACAAAATATATCTTTTGCCTGATTCCTATACT
TTTAGAGTTCTTTATCATCAGGTAATGTCATTGAAATAATTTTTTTTGAG
ACTTTTTATAACTTATATCAACCTTTAATTCAGATATACACGCCGTTTAA
TTATTGTCCTTTATATACAACAGCTGGTGTCAAGGAGGACCAGCAAGACC
TTTCTGAGATGGGGAAGCGAGTCGGTTGTGGTACTATAATGTCTTTTTTT
TTCTTATTGCTTAATTTATTCTTGCTGTTCGAAAAAAAAACACGCCCAAA
AGTACAGACAGAGTGACGACATTCTCAACTTATATCAGCCCGATCATTAA
GGAAGGAAAGTAATCAAACTAACAAAGATGCATCTATACACATGCTGACA
ATTAAGTGAACTTACTTTCAACGAACATTATGTGAACTGATAGCATCAAA
CAATTCCTATTCAATAACAGGCAGTTGCTATCATGCAAGTTATTGTTTGT
ATAGGAACGGAAGAAACATACTTCTTGGAAATCAATGTAGTGTATTATAG
GGTAAAACACGATTTTCCCTCATTCTGCATGAATAGTAATAATCGATTAC
TTATTATTTGCAATAGAAAATGTCAACAAATCCCGAATAGATTGATAACA
CAATATATATCGACCAAGATTATATAAAGAGGCAAGGAAAATTTCCATTT
CTAAAAAAGATATGATCACGAGCATTGTTTGGTACTAAATTTTATATAAT
CATTTCGAGTGGTGCAATGTTTTTGGTGCCTTTGCGTTTGCAGGTTGCCG
CTGGGAGGGCACAGCCCCGATATGCCCCGACCAATACGGTTGTGGCTACG
AAGAGTACTTTGCCGGGACTAGTTACTGTGGGGACGGACATTGCTGCATA
TGGGGCGGTCGGAAAACGAAGTGTTGTAAAA Coding sequence (CDS) from alignment at xpSc0039683:120671..123051+ >transcript:BL96172_evm1 ID=transcript:BL96172_evm1|Name=transcript:BL96172_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1372bp|location=Sequence derived from alignment at xpSc0039683:120671..123051+ (Branchiostoma lanceolatum)
CAAAGGCAACCCAACATTGGGGTTCTTACTGTCATCGTGCTTGGATGTGT
GGCACTCCTTTCTGCTTCCAGTTCAGCTGTCGACAGCGACAAGAAGAAGT
TGGAAGTGGTCGACAAACTGGAGAAGAGTCTTCTCCAGATACTAACAGCT
GGTGTCAAGGAGGACCAGCAAGACCTTTCTGAGATGGGGAAGCGAGTCGG
TTGTGGTTGCCGCTGGGAGGGCACAGCCCCGATATGCCCCGACCAATACG
GTTGTGGCTACGAAGAGTACTTTGCCGGGACTAGTTACTGTGGGGACGGA
CATTGCTGCATATGGGGCGGTCGGAAAACGAAGTGTTGTAAAACAAAGGC
AACCCAACATTGGGGTTCTTACTGTCATCGTGCTTGGATGTGTGGCACTC
CTTTCTGCTTCCAGTTCAGCTGTCGACAGCGACAAGAAGAAGTTGGAAGT
GGTCGACAAACTGGAGAAGAGTCTTCTCCAGATACTAACAGCTGGTGTCA
AGGAGGACCAGCAAGACCTTTCTGAGATGGGGAAGCGAGTCGGTTGTGGT
TGCCGCTGGGAGGGCACAGCCCCGATATGCCCCGACCAATACGGTTGTGG
CTACGAAGAGTACTTTGCCGGGACTAGTTACTGTGGGGACGGACATTGCT
GCATATGGGGCGGTCGGAAAACGAAGTGTTGTAAAACAAAGGCAACCCAA
CATTGGGGTTCTTACTGTCATCGTGCTTGGATGTGTGGCACTCCTTTCTG
CTTCCAGTTCAGCTGTCGACAGCGACAAGAAGAAGTTGGAAGTGGTCGAC
AAACTGGAGAAGAGTCTTCTCCAGATACTAACAGCTGGTGTCAAGGAGGA
CCAGCAAGACCTTTCTGAGATGGGGAAGCGAGTCGGTTGTGGTTGCCGCT
GGGAGGGCACAGCCCCGATATGCCCCGACCAATACGGTTGTGGCTACGAA
GAGTACTTTGCCGGGACTAGTTACTGTGGGGACGGACATTGCTGCATATG
GGGCGGTCGGAAAACGAAGTGTTGTAAAACAAAGGCAACCCAACATTGGG
GTTCTTACTGTCATCGTGCTTGGATGTGTGGCACTCCTTTCTGCTTCCAG
TTCAGCTGTCGACAGCGACAAGAAGAAGTTGGAAGTGGTCGACAAACTGG
AGAAGAGTCTTCTCCAGATACTAACAGCTGGTGTCAAGGAGGACCAGCAA
GACCTTTCTGAGATGGGGAAGCGAGTCGGTTGTGGTTGCCGCTGGGAGGG
CACAGCCCCGATATGCCCCGACCAATACGGTTGTGGCTACGAAGAGTACT
TTGCCGGGACTAGTTACTGTGGGGACGGACATTGCTGCATATGGGGCGGT
CGGAAAACGAAGTGTTGTAAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039683 | genome | xpSc0039683:120671..123051 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96172_evm1 |
| Biotype | protein_coding |
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