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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96169_evm1 >transcript:BL96169_evm1-protein ID=transcript:BL96169_evm1-protein|Name=transcript:BL96169_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=181bp
MFGEILSYIYSGTLHVSLDKVQHLYQAADLLQLDYVASSEEFCNLSVNQL
TEIISHDELDVKEEATVWEAVVRLHHLPSILPHIRSNFLTSDDTAAILEH
PLVMEDPGSSEVIRNAVQKGNSDPKPRLGMTMEMALLINTCTDPTSADAW
GDLKATLPGDTFVPRGSMCPVAHMYLPYLGA Run BLAST on NCBI mRNA from alignment at xpSc0039675:64277..65962+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96169_evm1 ID=transcript:BL96169_evm1|Name=transcript:BL96169_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1686bp|location=Sequence derived from alignment at xpSc0039675:64277..65962+ (Branchiostoma lanceolatum)
ATGTTTGGGGAGATCCTGAGTTACATCTACTCGGGAACCCTCCATGTGTC
CCTGGACAAAGTGCAGCACCTGTACCAGGCAGCCGACCTCCTCCAACTCG
ACTATGTGAGAGACACCTACAGCAGCTATATGATCTAAGTTTGTTGATGT
CTTCTCTGTGGACACTGTCAGGAAAGTCTGCCTACAGCATATTGCTAAGT
ACTTTACTGAGGTTAGTCTTCATTATTTATAGGTAAAGCATTTGTCCCTA
ATAGGAAGCTGATGTTGCATTTATATTGCACACACTGTGACAAAGATCAG
AGAACTATCTACAGTCTTCGCCTAGAAACTTGGTATTGCGTTGGGATAAA
CTGGGGAAACTTTGTACTTCGAATCCTGCTTTTTCTGAAGCACGGCTATA
CCAGATATTCAAACACAGATACAGAGCATTTATTTCCTACTTTTGATTTG
ATTTTGTCATGTACACACGTAGCTTCTTGTATGGTAGAACAAGATTAAGA
CACATATCTTCAAAACCTTCGTACATGTTCATGTACTCTTTACCTCCAGG
TTGCCTCCAGCGAGGAGTTCTGCAACCTGAGTGTGAATCAGCTGACTGAG
ATCATCAGCCACGATGAGCTGGATGTTAAAGAGGAGGCAACAGTGTGGGA
GGCTGTGGTGAGGTGGGTGCAGCACAGCAGGGAGGATAGGTGCATATCAA
TGTTTTATTGGTTCAGCCAAGTCTTAACTAGCAAAGGGCTATGACCAAAC
CAAGGTTTTGTCTGTGAGTTCTATTGTAGTCGGTACTTGAAATAGGTATA
ATGCATGAAGAATCTGTGTTGCCAAGAATTCAGCTGATCCCATCCCTACC
CTGTACCCTACAGACTGCACCACCTACCCAGCATCCTCCCTCACATCCGC
TCTAACTTCCTGACGTCTGATGACACGGCAGCCATCTTGGAACACCCCCT
AGTTATGGAGGATCCTGGGAGCTCTGAGGTCATCAGGAATGCGGTACAAA
AAGGGAACTCGGATCCGAAACCGAGGCTTGGGATGACCATGGAAATGGCT
TTGCTGATCAATACATGTACAGATCCGACGTCAGTATATACTTCTCATTT
TCTAAGACTTTGTGGTTAGAAACAATCCTTCTTGCACAATGTTATTTTAA
ATTTTGTGGTCCTGCAATACACATTTCCACAGAGATCATCATCTACTGAA
AGCATGTGCCTTGTATCTACTGTATCTATGCACCTCACAACCTTTGAAGT
GCACCGCTACGACCCGAGCCAGGACAGATGGTGCAGTCGGAGCTCACTGA
TGAACATTATGGACGTCTGCACTGCCGTTGCCATGGGTACAGAGATTTTC
TGCACAGATGTTGAGTTCAGCCAGACTATGGTGTACAGCACAGAGTCAGA
CAGCTGGCAGGAACTGCAAGGCTCACCAATCCCAGGAAACGTTGATGTTC
ACGCTGATGATGATGATGCTCCCAGGCTTTTTGTACTTGCAAACCAGCTG
CATATATTCTTTAAAGTCTATGACTATGTCGAAGAAGAGTTTTCAGTAGA
CACTCAGCTTCTTGTGTATGACAGGTCTGCTGATGCCTGGGGAGACTTGA
AGGCAACCCTGCCTGGTGATACGTTTGTACCGCGTGGTTCCATGTGCCCT
GTGGCACATATGTACCTGCCATATCTTGGTGCATAG Coding sequence (CDS) from alignment at xpSc0039675:64277..65962+ >transcript:BL96169_evm1 ID=transcript:BL96169_evm1|Name=transcript:BL96169_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2184bp|location=Sequence derived from alignment at xpSc0039675:64277..65962+ (Branchiostoma lanceolatum)
ATGTTTGGGGAGATCCTGAGTTACATCTACTCGGGAACCCTCCATGTGTC
CCTGGACAAAGTGCAGCACCTGTACCAGGCAGCCGACCTCCTCCAACTCG
ACTATGTTGCCTCCAGCGAGGAGTTCTGCAACCTGAGTGTGAATCAGCTG
ACTGAGATCATCAGCCACGATGAGCTGGATGTTAAAGAGGAGGCAACAGT
GTGGGAGGCTGTGGTGAGACTGCACCACCTACCCAGCATCCTCCCTCACA
TCCGCTCTAACTTCCTGACGTCTGATGACACGGCAGCCATCTTGGAACAC
CCCCTAGTTATGGAGGATCCTGGGAGCTCTGAGGTCATCAGGAATGCGGT
ACAAAAAGGGAACTCGGATCCGAAACCGAGGCTTGGGATGACCATGGAAA
TGGCTTTGCTGATCAATACATGTACAGATCCGACGTCTGCTGATGCCTGG
GGAGACTTGAAGGCAACCCTGCCTGGTGATACGTTTGTACCGCGTGGTTC
CATGTGCCCTGTGGCACATATGTACCTGCCATATCTTGGTGCATAGATGT
TTGGGGAGATCCTGAGTTACATCTACTCGGGAACCCTCCATGTGTCCCTG
GACAAAGTGCAGCACCTGTACCAGGCAGCCGACCTCCTCCAACTCGACTA
TGTTGCCTCCAGCGAGGAGTTCTGCAACCTGAGTGTGAATCAGCTGACTG
AGATCATCAGCCACGATGAGCTGGATGTTAAAGAGGAGGCAACAGTGTGG
GAGGCTGTGGTGAGACTGCACCACCTACCCAGCATCCTCCCTCACATCCG
CTCTAACTTCCTGACGTCTGATGACACGGCAGCCATCTTGGAACACCCCC
TAGTTATGGAGGATCCTGGGAGCTCTGAGGTCATCAGGAATGCGGTACAA
AAAGGGAACTCGGATCCGAAACCGAGGCTTGGGATGACCATGGAAATGGC
TTTGCTGATCAATACATGTACAGATCCGACGTCTGCTGATGCCTGGGGAG
ACTTGAAGGCAACCCTGCCTGGTGATACGTTTGTACCGCGTGGTTCCATG
TGCCCTGTGGCACATATGTACCTGCCATATCTTGGTGCATAGATGTTTGG
GGAGATCCTGAGTTACATCTACTCGGGAACCCTCCATGTGTCCCTGGACA
AAGTGCAGCACCTGTACCAGGCAGCCGACCTCCTCCAACTCGACTATGTT
GCCTCCAGCGAGGAGTTCTGCAACCTGAGTGTGAATCAGCTGACTGAGAT
CATCAGCCACGATGAGCTGGATGTTAAAGAGGAGGCAACAGTGTGGGAGG
CTGTGGTGAGACTGCACCACCTACCCAGCATCCTCCCTCACATCCGCTCT
AACTTCCTGACGTCTGATGACACGGCAGCCATCTTGGAACACCCCCTAGT
TATGGAGGATCCTGGGAGCTCTGAGGTCATCAGGAATGCGGTACAAAAAG
GGAACTCGGATCCGAAACCGAGGCTTGGGATGACCATGGAAATGGCTTTG
CTGATCAATACATGTACAGATCCGACGTCTGCTGATGCCTGGGGAGACTT
GAAGGCAACCCTGCCTGGTGATACGTTTGTACCGCGTGGTTCCATGTGCC
CTGTGGCACATATGTACCTGCCATATCTTGGTGCATAGATGTTTGGGGAG
ATCCTGAGTTACATCTACTCGGGAACCCTCCATGTGTCCCTGGACAAAGT
GCAGCACCTGTACCAGGCAGCCGACCTCCTCCAACTCGACTATGTTGCCT
CCAGCGAGGAGTTCTGCAACCTGAGTGTGAATCAGCTGACTGAGATCATC
AGCCACGATGAGCTGGATGTTAAAGAGGAGGCAACAGTGTGGGAGGCTGT
GGTGAGACTGCACCACCTACCCAGCATCCTCCCTCACATCCGCTCTAACT
TCCTGACGTCTGATGACACGGCAGCCATCTTGGAACACCCCCTAGTTATG
GAGGATCCTGGGAGCTCTGAGGTCATCAGGAATGCGGTACAAAAAGGGAA
CTCGGATCCGAAACCGAGGCTTGGGATGACCATGGAAATGGCTTTGCTGA
TCAATACATGTACAGATCCGACGTCTGCTGATGCCTGGGGAGACTTGAAG
GCAACCCTGCCTGGTGATACGTTTGTACCGCGTGGTTCCATGTGCCCTGT
GGCACATATGTACCTGCCATATCTTGGTGCATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039675 | genome | xpSc0039675:64277..65962 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96169_evm1 |
| Biotype | protein_coding |
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