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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96132_evm1 >transcript:BL96132_evm1-protein ID=transcript:BL96132_evm1-protein|Name=transcript:BL96132_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=432bp
MADRGEAPTEEIIGEMNAEEQRMFKNLAAAEGASKVEILQEIQKYAAENL
EAWKNQKVYVGIVGDPGAGKSTFINSIRGLKPKAPGAAAVGVTHTTDVTT
DYPHPARPDSLVFVDFPGVLLEKGRGDGRDFDIQQYLAKFGEKMEQCHVF
LVFSSGRIQHNAVQIGMKARDMGKKVLFVRSQFDKDLADKQNDDPEYFDD
KTEAEAETDLMEELRQDYIKVLEKVGWEGEVNPRDVFIISGRLNYSLKGS
WDIPKFRIALVEGFHALQKMVVSNTCRDFSKATIKERGDVYKSKVWSVAM
AASTGSIVPYAGAAAIPEGFSLTDDAVKQLAKMTNKNPEDLNTFLSVRLL
DKEKLNEGESEALRVVQVICSELDTAAIIVDQAVDLTLPVIGAIITFPLS
YYIMIKLLHALISRMEKCASELFDYAFKESEV Run BLAST on NCBI mRNA from alignment at Sc0000630:14673..16777- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96132_evm1 ID=transcript:BL96132_evm1|Name=transcript:BL96132_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2105bp|location=Sequence derived from alignment at Sc0000630:14673..16777- (Branchiostoma lanceolatum)
ATGGCGGATCGCGGGGAAGCACCAACCGAGTAAGTAGATATTATCATCAT
CATGGTCTGAGAAGGGTTTTTGTATAAAGGACTTGCATATACAAGTAGGA
GAATACATAATCCATGATGTATTTCCCACACAGATGTCACAAAAGTATCA
ATCAATAATTGTAGTGATAACAACAATGAATCATTTAATGATGATATTCA
TTTCAGATTGTATGAATTACTTTCTTGAGATACATCCTATGTGGTAAGAC
ATACTGTAAAGCAAGGATGTCCCCCGTTAGCTAATATGTAAATACCGTAT
ATCTAGCTTTTGCTCGTGATCGAATTACTTGTCTTTTTCGTCAATCCGCA
GGGAGATCATTGGAGAAATGAACGCGGAGGAGCAAAGAATGTTTAAGAAC
TTAGCCGCGGCCGAAGGCGCGAGTAAAGTAGAGATATTGCAAGAGATTCA
AAAGTACGCTGCGGAAAACTTGGAGGCTTGGAAGAATCAGAAGGTCTACG
TGGGCATTGTGGGTGACCCCGGGGCGGGGAAGAGCACCTTCATCAACTCC
ATCCGCGGGCTGAAACCCAAGGCTCCGGGTGCAGCAGCGGTCGGTGTTAC
GCACACTACCGATGTAACCACCGACTACCCCCATCCAGCACGCCCGGACA
GCCTTGTCTTCGTCGACTTCCCCGGTGTCCTCCTGGAGAAAGGAAGAGGT
GACGGGCGCGACTTCGACATCCAACAGTATCTCGCCAAGTTTGGGGAGAA
GATGGAGCAGTGTCACGTGTTCCTGGTCTTCAGCAGCGGCCGTATCCAGC
ACAACGCCGTGCAGATCGGGATGAAGGCCCGGGATATGGGGAAGAAGGTT
CTGTTCGTCAGGTCACAGTTCGACAAAGATTTGGCCGACAAGCAGAACGA
TGACCCCGAGTACTTCGACGACAAGACCGAGGCCGAAGCCGAGACCGACC
TGATGGAGGAACTCCGCCAGGACTACATCAAGGTCCTTGAGAAGGTGGGA
TGGGAGGGGGAAGTGAACCCTAGAGATGTCTTCATCATCAGCGGCCGTCT
TAACTACTCGTTGAAGGGCTCCTGGGACATCCCGAAGTTCCGGATTGCGC
TGGTCGAAGGGTTCCACGCTCTCCAAAAGATGGTCGTCAGCAACACCTGC
CGGGACTTTTCCAAGGCCACCATCAAGGAAAGGGGGGACGTCTACAAAAG
CAAAGTGTGGTCCGTTGCTATGGCAGCAAGTACAGGCTCCATTGTTCCAT
ACGCTGGCGCTGCTGCTATTCCAGGTAGGTCAAAATCAATTAACAGAGAC
ATCTACAGAACATAACATTTCACGTAGTTCGTTGCTAGCCTCCATAGCAG
GCTCTCTGGGCCTTTTTTGGGCCTATATTACACTTTTTGCTACTAGGTCG
TTTGTGAGGCCGGCCACCCAGGCATTCTAGAGTTATAGTGTTCACAGACA
AACAGACAAAAACATACAGACATACATACATACAGACAGTCAGACACACA
GACTGACCACACATGGCACCGAATAACGTTATATGATCTCCTTGGCGAAG
GTAACAAGAAACATCATAGAGGTAATATCACATCACGGTGAGTTAATATA
ATGGCAGTGCTTTACGTTTAAAATAATAATATATTTACTTTATCTTGAGA
AAAAAAAGGATTGCTGATCTATCTCATTGTTTTCGTTCCCCCGTATCACC
ATACCTGTTCCTCACTTGATTACGGCTGCCCTCCATATCGTGTATCACCA
GTACAAAGAAGGATTTAGCCTGACGGACGATGCTGTGAAGCAACTGGCCA
AGATGACCAACAAGAATCCAGAGGATCTCAATACGTTCTTGTCTGTTAGG
CTGCTGGACAAAGAGAAGTTAAACGAGGGTGAGAGTGAGGCTTTGAGAGT
TGTTCAGGTCATTTGTAGTGAATTAGACACAGCTGCCATTATTGTTGACC
AGGCAGTAGATCTGACCCTTCCCGTGATTGGCGCTATTATCACATTCCCA
CTGTCATATTACATAATGATAAAACTCCTGCATGCGTTGATTTCACGCAT
GGAGAAGTGCGCCAGTGAGCTGTTTGATTATGCCTTCAAGGAAAGTGAGG
TGTGA Coding sequence (CDS) from alignment at Sc0000630:14673..16777- >transcript:BL96132_evm1 ID=transcript:BL96132_evm1|Name=transcript:BL96132_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3897bp|location=Sequence derived from alignment at Sc0000630:14673..16777- (Branchiostoma lanceolatum)
ATGGCGGATCGCGGGGAAGCACCAACCGAGGAGATCATTGGAGAAATGAA
CGCGGAGGAGCAAAGAATGTTTAAGAACTTAGCCGCGGCCGAAGGCGCGA
GTAAAGTAGAGATATTGCAAGAGATTCAAAAGTACGCTGCGGAAAACTTG
GAGGCTTGGAAGAATCAGAAGGTCTACGTGGGCATTGTGGGTGACCCCGG
GGCGGGGAAGAGCACCTTCATCAACTCCATCCGCGGGCTGAAACCCAAGG
CTCCGGGTGCAGCAGCGGTCGGTGTTACGCACACTACCGATGTAACCACC
GACTACCCCCATCCAGCACGCCCGGACAGCCTTGTCTTCGTCGACTTCCC
CGGTGTCCTCCTGGAGAAAGGAAGAGGTGACGGGCGCGACTTCGACATCC
AACAGTATCTCGCCAAGTTTGGGGAGAAGATGGAGCAGTGTCACGTGTTC
CTGGTCTTCAGCAGCGGCCGTATCCAGCACAACGCCGTGCAGATCGGGAT
GAAGGCCCGGGATATGGGGAAGAAGGTTCTGTTCGTCAGGTCACAGTTCG
ACAAAGATTTGGCCGACAAGCAGAACGATGACCCCGAGTACTTCGACGAC
AAGACCGAGGCCGAAGCCGAGACCGACCTGATGGAGGAACTCCGCCAGGA
CTACATCAAGGTCCTTGAGAAGGTGGGATGGGAGGGGGAAGTGAACCCTA
GAGATGTCTTCATCATCAGCGGCCGTCTTAACTACTCGTTGAAGGGCTCC
TGGGACATCCCGAAGTTCCGGATTGCGCTGGTCGAAGGGTTCCACGCTCT
CCAAAAGATGGTCGTCAGCAACACCTGCCGGGACTTTTCCAAGGCCACCA
TCAAGGAAAGGGGGGACGTCTACAAAAGCAAAGTGTGGTCCGTTGCTATG
GCAGCAAGTACAGGCTCCATTGTTCCATACGCTGGCGCTGCTGCTATTCC
AGAAGGATTTAGCCTGACGGACGATGCTGTGAAGCAACTGGCCAAGATGA
CCAACAAGAATCCAGAGGATCTCAATACGTTCTTGTCTGTTAGGCTGCTG
GACAAAGAGAAGTTAAACGAGGGTGAGAGTGAGGCTTTGAGAGTTGTTCA
GGTCATTTGTAGTGAATTAGACACAGCTGCCATTATTGTTGACCAGGCAG
TAGATCTGACCCTTCCCGTGATTGGCGCTATTATCACATTCCCACTGTCA
TATTACATAATGATAAAACTCCTGCATGCGTTGATTTCACGCATGGAGAA
GTGCGCCAGTGAGCTGTTTGATTATGCCTTCAAGGAAAGTGAGGTGTGAA
TGGCGGATCGCGGGGAAGCACCAACCGAGGAGATCATTGGAGAAATGAAC
GCGGAGGAGCAAAGAATGTTTAAGAACTTAGCCGCGGCCGAAGGCGCGAG
TAAAGTAGAGATATTGCAAGAGATTCAAAAGTACGCTGCGGAAAACTTGG
AGGCTTGGAAGAATCAGAAGGTCTACGTGGGCATTGTGGGTGACCCCGGG
GCGGGGAAGAGCACCTTCATCAACTCCATCCGCGGGCTGAAACCCAAGGC
TCCGGGTGCAGCAGCGGTCGGTGTTACGCACACTACCGATGTAACCACCG
ACTACCCCCATCCAGCACGCCCGGACAGCCTTGTCTTCGTCGACTTCCCC
GGTGTCCTCCTGGAGAAAGGAAGAGGTGACGGGCGCGACTTCGACATCCA
ACAGTATCTCGCCAAGTTTGGGGAGAAGATGGAGCAGTGTCACGTGTTCC
TGGTCTTCAGCAGCGGCCGTATCCAGCACAACGCCGTGCAGATCGGGATG
AAGGCCCGGGATATGGGGAAGAAGGTTCTGTTCGTCAGGTCACAGTTCGA
CAAAGATTTGGCCGACAAGCAGAACGATGACCCCGAGTACTTCGACGACA
AGACCGAGGCCGAAGCCGAGACCGACCTGATGGAGGAACTCCGCCAGGAC
TACATCAAGGTCCTTGAGAAGGTGGGATGGGAGGGGGAAGTGAACCCTAG
AGATGTCTTCATCATCAGCGGCCGTCTTAACTACTCGTTGAAGGGCTCCT
GGGACATCCCGAAGTTCCGGATTGCGCTGGTCGAAGGGTTCCACGCTCTC
CAAAAGATGGTCGTCAGCAACACCTGCCGGGACTTTTCCAAGGCCACCAT
CAAGGAAAGGGGGGACGTCTACAAAAGCAAAGTGTGGTCCGTTGCTATGG
CAGCAAGTACAGGCTCCATTGTTCCATACGCTGGCGCTGCTGCTATTCCA
GAAGGATTTAGCCTGACGGACGATGCTGTGAAGCAACTGGCCAAGATGAC
CAACAAGAATCCAGAGGATCTCAATACGTTCTTGTCTGTTAGGCTGCTGG
ACAAAGAGAAGTTAAACGAGGGTGAGAGTGAGGCTTTGAGAGTTGTTCAG
GTCATTTGTAGTGAATTAGACACAGCTGCCATTATTGTTGACCAGGCAGT
AGATCTGACCCTTCCCGTGATTGGCGCTATTATCACATTCCCACTGTCAT
ATTACATAATGATAAAACTCCTGCATGCGTTGATTTCACGCATGGAGAAG
TGCGCCAGTGAGCTGTTTGATTATGCCTTCAAGGAAAGTGAGGTGTGAAT
GGCGGATCGCGGGGAAGCACCAACCGAGGAGATCATTGGAGAAATGAACG
CGGAGGAGCAAAGAATGTTTAAGAACTTAGCCGCGGCCGAAGGCGCGAGT
AAAGTAGAGATATTGCAAGAGATTCAAAAGTACGCTGCGGAAAACTTGGA
GGCTTGGAAGAATCAGAAGGTCTACGTGGGCATTGTGGGTGACCCCGGGG
CGGGGAAGAGCACCTTCATCAACTCCATCCGCGGGCTGAAACCCAAGGCT
CCGGGTGCAGCAGCGGTCGGTGTTACGCACACTACCGATGTAACCACCGA
CTACCCCCATCCAGCACGCCCGGACAGCCTTGTCTTCGTCGACTTCCCCG
GTGTCCTCCTGGAGAAAGGAAGAGGTGACGGGCGCGACTTCGACATCCAA
CAGTATCTCGCCAAGTTTGGGGAGAAGATGGAGCAGTGTCACGTGTTCCT
GGTCTTCAGCAGCGGCCGTATCCAGCACAACGCCGTGCAGATCGGGATGA
AGGCCCGGGATATGGGGAAGAAGGTTCTGTTCGTCAGGTCACAGTTCGAC
AAAGATTTGGCCGACAAGCAGAACGATGACCCCGAGTACTTCGACGACAA
GACCGAGGCCGAAGCCGAGACCGACCTGATGGAGGAACTCCGCCAGGACT
ACATCAAGGTCCTTGAGAAGGTGGGATGGGAGGGGGAAGTGAACCCTAGA
GATGTCTTCATCATCAGCGGCCGTCTTAACTACTCGTTGAAGGGCTCCTG
GGACATCCCGAAGTTCCGGATTGCGCTGGTCGAAGGGTTCCACGCTCTCC
AAAAGATGGTCGTCAGCAACACCTGCCGGGACTTTTCCAAGGCCACCATC
AAGGAAAGGGGGGACGTCTACAAAAGCAAAGTGTGGTCCGTTGCTATGGC
AGCAAGTACAGGCTCCATTGTTCCATACGCTGGCGCTGCTGCTATTCCAG
AAGGATTTAGCCTGACGGACGATGCTGTGAAGCAACTGGCCAAGATGACC
AACAAGAATCCAGAGGATCTCAATACGTTCTTGTCTGTTAGGCTGCTGGA
CAAAGAGAAGTTAAACGAGGGTGAGAGTGAGGCTTTGAGAGTTGTTCAGG
TCATTTGTAGTGAATTAGACACAGCTGCCATTATTGTTGACCAGGCAGTA
GATCTGACCCTTCCCGTGATTGGCGCTATTATCACATTCCCACTGTCATA
TTACATAATGATAAAACTCCTGCATGCGTTGATTTCACGCATGGAGAAGT
GCGCCAGTGAGCTGTTTGATTATGCCTTCAAGGAAAGTGAGGTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000630 | genome | Sc0000630:14673..16777 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96132_evm1 |
| Biotype | protein_coding |
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