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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96129_evm0 >transcript:BL96129_evm0-protein ID=transcript:BL96129_evm0-protein|Name=transcript:BL96129_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=171bp
MLTIGRLNLSPDRYAAGMRVFQAAYETGTESHYQSFAAMVPDSTLCGAGE
DVRVLAIGSGSGEADISILKKLLKNHKSVYNRVVEPSEMIEGYKTLVGTD
KSLGAVKCDWHQQTAEEYFQTKGDTKFHLIHAIHCLYHVEDLHVTLRNMW
EQLTDGGYMLVGMDAGHMRVF Run BLAST on NCBI mRNA from alignment at Sc0000587:89972..91164- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96129_evm0 ID=transcript:BL96129_evm0|Name=transcript:BL96129_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1193bp|location=Sequence derived from alignment at Sc0000587:89972..91164- (Branchiostoma lanceolatum)
ATGCTGACGATCGGAAGGCTGAATCTCTCTCCAGACCGGTATGCGGCAGG
AATGAGAGTCTTCCAGGCCGCATATGAGACAGGCACAGAGAGCCACTACC
AATCATTTGCGGCAATGGTTCCAGACTCTACACTGTGCGGAGCGGGAGAA
GACGTGCGTGTGCTAGCGATAGGAAGTGGATCAGGTGAGACCGCCATGTT
GACCTTGCAATGCAGATTCAATTCGTGAGAGGGTTAGCAATCGGTCGGGG
ATTAGTCAGGAGAGATTCAGCAGTCTGCGGCTAGAGGTCGGGATGGTTGG
GAGTAGGTTAGAAAGCATTCGGGCTCAGTCGGGAGTAATTCATGTACTGG
TTAGGAGATGGGTGGGACATGTTCGGTGCATGTTCGCCGCAAAAGATAGG
CGTAGCCTAAAAACTGGTCAGACTGCTCCCGAAGTACCGCCGACCTGATT
CGGCTGGTGTTCGGGAACCATGCTCGACTATGTGTAACCTCAGGCTTGAG
TATTACCACACTTAGATCTTATTGTTGTCATTTAGGAGAGGCTGACATCA
GCATTCTGAAGAAGCTTCTTAAAAACCACAAGAGTGTGTACAACAGGGTC
GTGGAACCGTCGGAAATGATTGAGGGCTACAAGGTGAGGTAGTATTTAGT
TTGCTTCGAACGTTGTATTGTTCGTGTCCATACTCATTGTATTCAAACGG
TAATGCTTATCTAACAGCATGGTTACGGAGGATGTTCAAGTGTGTAAACC
AGTTTAAAGTGTGGCTACCAGCTACCTTTACAATGTCATTCACATCAATA
TAACTGTGTATCATACAGACACTAGTGGGAACGGACAAGAGCCTCGGTGC
TGTGAAGTGTGACTGGCACCAGCAGACAGCAGAAGAGTACTTCCAGACAA
AGGGAGACACGAAGTTCCACCTGATCCATGCGATCCACTGTCTATACCAT
GTGGAAGATCTTCACGTCACCTTGCGGAACATGTGGGAACAGCTGACAGA
TGGTGGCTACATGTTAGTCGGAATGGACGCAGGTAAGTTACTAACCTAGC
AAGTTCAGTTCTCAGTATCGAACACATCTTCTGGTACTGGAACAGTTCAA
TAGAGGTTTACTCGATCTGACTCACTTCCTGTATCTGTAGGAAGCTGAAG
TTGTACCTATATTCCCTCTATAGGTCACATGCGTGTTTTCTAG Coding sequence (CDS) from alignment at Sc0000587:89972..91164- >transcript:BL96129_evm0 ID=transcript:BL96129_evm0|Name=transcript:BL96129_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=2064bp|location=Sequence derived from alignment at Sc0000587:89972..91164- (Branchiostoma lanceolatum)
ATGCTGACGATCGGAAGGCTGAATCTCTCTCCAGACCGGTATGCGGCAGG
AATGAGAGTCTTCCAGGCCGCATATGAGACAGGCACAGAGAGCCACTACC
AATCATTTGCGGCAATGGTTCCAGACTCTACACTGTGCGGAGCGGGAGAA
GACGTGCGTGTGCTAGCGATAGGAAGTGGATCAGGAGAGGCTGACATCAG
CATTCTGAAGAAGCTTCTTAAAAACCACAAGAGTGTGTACAACAGGGTCG
TGGAACCGTCGGAAATGATTGAGGGCTACAAGACACTAGTGGGAACGGAC
AAGAGCCTCGGTGCTGTGAAGTGTGACTGGCACCAGCAGACAGCAGAAGA
GTACTTCCAGACAAAGGGAGACACGAAGTTCCACCTGATCCATGCGATCC
ACTGTCTATACCATGTGGAAGATCTTCACGTCACCTTGCGGAACATGTGG
GAACAGCTGACAGATGGTGGCTACATGTTAGTCGGAATGGACGCAGGTCA
CATGCGTGTTTTCTAGATGCTGACGATCGGAAGGCTGAATCTCTCTCCAG
ACCGGTATGCGGCAGGAATGAGAGTCTTCCAGGCCGCATATGAGACAGGC
ACAGAGAGCCACTACCAATCATTTGCGGCAATGGTTCCAGACTCTACACT
GTGCGGAGCGGGAGAAGACGTGCGTGTGCTAGCGATAGGAAGTGGATCAG
GAGAGGCTGACATCAGCATTCTGAAGAAGCTTCTTAAAAACCACAAGAGT
GTGTACAACAGGGTCGTGGAACCGTCGGAAATGATTGAGGGCTACAAGAC
ACTAGTGGGAACGGACAAGAGCCTCGGTGCTGTGAAGTGTGACTGGCACC
AGCAGACAGCAGAAGAGTACTTCCAGACAAAGGGAGACACGAAGTTCCAC
CTGATCCATGCGATCCACTGTCTATACCATGTGGAAGATCTTCACGTCAC
CTTGCGGAACATGTGGGAACAGCTGACAGATGGTGGCTACATGTTAGTCG
GAATGGACGCAGGTCACATGCGTGTTTTCTAGATGCTGACGATCGGAAGG
CTGAATCTCTCTCCAGACCGGTATGCGGCAGGAATGAGAGTCTTCCAGGC
CGCATATGAGACAGGCACAGAGAGCCACTACCAATCATTTGCGGCAATGG
TTCCAGACTCTACACTGTGCGGAGCGGGAGAAGACGTGCGTGTGCTAGCG
ATAGGAAGTGGATCAGGAGAGGCTGACATCAGCATTCTGAAGAAGCTTCT
TAAAAACCACAAGAGTGTGTACAACAGGGTCGTGGAACCGTCGGAAATGA
TTGAGGGCTACAAGACACTAGTGGGAACGGACAAGAGCCTCGGTGCTGTG
AAGTGTGACTGGCACCAGCAGACAGCAGAAGAGTACTTCCAGACAAAGGG
AGACACGAAGTTCCACCTGATCCATGCGATCCACTGTCTATACCATGTGG
AAGATCTTCACGTCACCTTGCGGAACATGTGGGAACAGCTGACAGATGGT
GGCTACATGTTAGTCGGAATGGACGCAGGTCACATGCGTGTTTTCTAGAT
GCTGACGATCGGAAGGCTGAATCTCTCTCCAGACCGGTATGCGGCAGGAA
TGAGAGTCTTCCAGGCCGCATATGAGACAGGCACAGAGAGCCACTACCAA
TCATTTGCGGCAATGGTTCCAGACTCTACACTGTGCGGAGCGGGAGAAGA
CGTGCGTGTGCTAGCGATAGGAAGTGGATCAGGAGAGGCTGACATCAGCA
TTCTGAAGAAGCTTCTTAAAAACCACAAGAGTGTGTACAACAGGGTCGTG
GAACCGTCGGAAATGATTGAGGGCTACAAGACACTAGTGGGAACGGACAA
GAGCCTCGGTGCTGTGAAGTGTGACTGGCACCAGCAGACAGCAGAAGAGT
ACTTCCAGACAAAGGGAGACACGAAGTTCCACCTGATCCATGCGATCCAC
TGTCTATACCATGTGGAAGATCTTCACGTCACCTTGCGGAACATGTGGGA
ACAGCTGACAGATGGTGGCTACATGTTAGTCGGAATGGACGCAGGTCACA
TGCGTGTTTTCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000587 | genome | Sc0000587:89972..91164 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96129_evm0 |
| Biotype | protein_coding |
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