|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96106_evm0 >transcript:BL96106_evm0-protein ID=transcript:BL96106_evm0-protein|Name=transcript:BL96106_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=328bp
MKLLILAVFVAVATAMDPEWEAFKLLHGKEYNSLSEENARHSIFEENNKI
VKQHNEEAGMGKHTYFMKMNKFGDLTTEEFRMLVIGTGFMQTNKTQQAEG
GVFERMPGLKVNDTVDWRPKGAVTKVKNQEQCGSCWAFSATGSLEGQHFM
KSGTLVSLSEQNLMDCSRKEGNKGCKGGSMDQAFKYIKMNGGIDTEECYM
YRGRDERTCRYKSSCSGATLSSFTDIKMGDEMALMQAVGTVGPISVAIDA
GHKSFQLYHHGVYNEPMCSSKKLDHGVLAVGYGTNDGTDYWLVKNSWGAE
WGMEGYVMMSRNKENQCGIATDASYPVV Run BLAST on NCBI mRNA from alignment at Sc0000506:32807..35936- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96106_evm0 ID=transcript:BL96106_evm0|Name=transcript:BL96106_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3130bp|location=Sequence derived from alignment at Sc0000506:32807..35936- (Branchiostoma lanceolatum)
ATGAAGCTTTTGATCCTCGCTGTCTTCGTCGCTGTGGCAACGGCCATGGA
CCCTGAGTGGGAGGCCTTCAAACTTCTTCACGGTAAAGTGAAATCTCTGA
TATCATGAATTACTTTTGTCGTAGGAAACACTCCCCTGTCTTTCCTTTCG
GTTAGACTTTATGTCTTATTGCAAAGCATGTAAGGTCATCCTTGGGACTT
ATCAATGTTTACCTATAGAATAACTTATTCTTATATCTCAATAAACATGG
CCATGGAGGCAAAATCGTAAGAAAGGAGTGTTTCAACGCTACCATCTCCT
ATCGCGAAAACGGTCCGTTTGAAGACAAGTTTATGACGTATTGATTTGCT
ACTAGGCAAGGAATACAACAGCCTGTCTGAGGAGAACGCTCGGCACTCTA
TCTTCGAGGAGAACAACAAGATCGTGAAACAGCACAACGAGGAGGCAGGC
ATGGGGAAACATACCTACTTCATGAAGATGAACAAGTTTGGAGATCTGGT
GAGTCGGTATTCCGTCGTCTTATGACAGTACAAGCTTGAATATGCCGTTA
TATTCTAAGGTCCTATCTAAGCCTCCTGAGTAATACTAAATGACATATGA
ATCTTTGCTTATTGTAAGCAAAGTTACAGAAGCTGACGTAATACACGGCA
ATCAATATGCTCTTAACAACAAGGCATGACGGTGTATAACAATAAACATA
TGAATTGTTAAAGAATATAAAAAGTGTAAGCCCAGCAGCGCTCTTCTTAC
AGACAACGGAAGAGTTCCGGATGCTGGTGATCGGGACAGGTTTCATGCAG
ACAAACAAGACCCAGCAAGCCGAGGGGGGAGTCTTCGAGAGAATGCCGGG
TCTGAAGGTCAACGACACCGTGGACTGGAGACCGAAAGGTGCCGTGACGA
AGGTCAAGAACCAGGAACAGTGTGGGTCCTGCTGGGCCTTCAGCGCGGTG
AGTGTCACGATAACTGCTGTGTGACCTTCTGGACAGCTGTGAACAACTCG
AGTTGTAAATTTGAATTTCAGCCTTAGTATTTGGTGGAATGGATTAATCT
TCATCAGTAATTATGGAAGAATTCATTTTCATCAATACGAATCGAGAATG
AAGGCTTTATGTTCACAGGCTTTCAAGTAAAATGCTACAAAAACAAACAC
ATTTTATCCACAAGACTTTTGCTTTTGAAGACCACAATCTTTCACTAATG
ACTGTGACACATGACACGTTTTTTGCCTACACCATCATATGCCTTCTTTT
GTTGTTTTGATTGTAATGATATACTTTGTTGTATTCACATTTATCTAGTG
TGGATTGTGGGAGAGGACAGTAAAAACAAATAAACGAAAACTATATAGCA
TATGACAGTAGATGTTCCATTTTTATGGACGCCGCCATATTGACATGTGC
ATGCTGGGGAATATGGCACCTACCACAAGTGGTTGGGGTGTTGATATTTT
TAATTGCCTTCACCAAGACGTTTTTGTGCTGCATGGCAGTAATGCAATAC
GTGTGATGAAACTTCTAAATATGTCATGGAGGAATGAACGAAGTCTCCGA
ACTCTTGTTGTTCTTGTAGACCGGTTCTCTGGAGGGTCAACACTTCATGA
AGTCAGGCACGCTGGTGTCCCTGAGTGAGCAGAACCTGATGGACTGCTCC
CGTAAGGAAGGCAACAAGGGCTGCAAGGGCGGAAGCATGGATCAGGCTTT
CAAGTACATCAAGATGAACGGCGGCATCGACACTGAGGAGTGCTATATGT
ACAGGGGGAGGGTAAGCTTACACAGAATTACCCTTGTATTGATGTCTGTT
GTTTAGATGATGAAGAAAGGTTTATGAAAATCTTTCGCATCAGTGTATAT
AGTCCGAGGATTCGTGTCTATTGAATGGCATAATCAAAACTACAGAGAGT
GTCATTTGAATCAAAAGCATGTTTACCCTAGAGCCGAGGAATTGGCCCAT
TGGCTACCATAAAACCATCTGGCATCCAGGCTATGTAGAGCCAGATCATA
AAGCGTTTTCATAGTTTGATTCCCCTGCTACATTCCATGACAGGACGAGA
GAACGTGCAGGTACAAGTCGAGCTGCAGCGGAGCCACCCTGTCCAGCTTC
ACGGACATCAAGATGGGAGACGAGATGGCGCTGATGCAGGCTGTCGGCAC
CGTCGGACCCATCTCCGTCGCCATTGACGCCGGCCACAAGTCTTTCCAGC
TCTATCATCACGGTAAGAGGGTTGTGTCCGTTTTACTGGTACTGTCAGCA
ATAAGCTGGTCTACGGTTTGAACTGCGCAGTGTGTTTAAAAATAACTTTT
GAGGAAGACTGTATCTAACGTTGTAGATAGATGCGAAGAATGCGGTCCCA
AACGTAAAGTTGACTCATCTTGTATCATATAATGTATCCCCCTCCATACC
TATCCATGACTGGCGTAGATTTTCTGATCGAATTGTCCTCTCTGTCTCTG
GTTGTGTCAGAAGAACTTCAATACTTATGAAACGATTCATGAAATGATGG
AAATATATATTTATTAATATTTCAGGTGTATACAACGAGCCCATGTGCAG
CTCCAAGAAGCTGGACCACGGTGTTCTGGCCGTAGGATATGGCACTAACG
ATGGAACCGACTACTGGCTCGTCAAGAACAGGTCAGTATATGGAAACTAA
CATGCATAATCATATGTATTTACCTACGTAATAAACCTTAGTTAGTAAAC
GCTCTGTGTCTTACACCGGTAAAGGTAATCAGGTAAAGAAGTCATCATCG
AGAAGTAAAGCAATGATCATCAATTAGAAGGGTTACAATTGCACGACCTG
TATGATTATTCGCTCAGACTTTAAATCCTTCTCTATAGTTTTCAACAGAC
AGTCGGGAAAGATGACTGTTATCAAATTATAAAAATAGGGATTGAGACTT
AGAGTTGTAACATCGCAACTCTGTTTTCTTGATGATCAAACCGTTTGACG
GCCACACGAAACTGCAAGTCAGATGATATGATTGCAATACAAACAAACAG
CAAAGAAACGACTTTTTTTCTTTACCACAGTTGGGGCGCGGAGTGGGGCA
TGGAGGGATACGTCATGATGTCCAGGAACAAGGAGAACCAGTGCGGCATC
GCCACTGACGCCAGCTACCCTGTCGTCTGA Coding sequence (CDS) from alignment at Sc0000506:32807..35936- >transcript:BL96106_evm0 ID=transcript:BL96106_evm0|Name=transcript:BL96106_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=6909bp|location=Sequence derived from alignment at Sc0000506:32807..35936- (Branchiostoma lanceolatum)
ATGAAGCTTTTGATCCTCGCTGTCTTCGTCGCTGTGGCAACGGCCATGGA
CCCTGAGTGGGAGGCCTTCAAACTTCTTCACGGCAAGGAATACAACAGCC
TGTCTGAGGAGAACGCTCGGCACTCTATCTTCGAGGAGAACAACAAGATC
GTGAAACAGCACAACGAGGAGGCAGGCATGGGGAAACATACCTACTTCAT
GAAGATGAACAAGTTTGGAGATCTGACAACGGAAGAGTTCCGGATGCTGG
TGATCGGGACAGGTTTCATGCAGACAAACAAGACCCAGCAAGCCGAGGGG
GGAGTCTTCGAGAGAATGCCGGGTCTGAAGGTCAACGACACCGTGGACTG
GAGACCGAAAGGTGCCGTGACGAAGGTCAAGAACCAGGAACAGTGTGGGT
CCTGCTGGGCCTTCAGCGCGACCGGTTCTCTGGAGGGTCAACACTTCATG
AAGTCAGGCACGCTGGTGTCCCTGAGTGAGCAGAACCTGATGGACTGCTC
CCGTAAGGAAGGCAACAAGGGCTGCAAGGGCGGAAGCATGGATCAGGCTT
TCAAGTACATCAAGATGAACGGCGGCATCGACACTGAGGAGTGCTATATG
TACAGGGGGAGGGACGAGAGAACGTGCAGGTACAAGTCGAGCTGCAGCGG
AGCCACCCTGTCCAGCTTCACGGACATCAAGATGGGAGACGAGATGGCGC
TGATGCAGGCTGTCGGCACCGTCGGACCCATCTCCGTCGCCATTGACGCC
GGCCACAAGTCTTTCCAGCTCTATCATCACGGTGTATACAACGAGCCCAT
GTGCAGCTCCAAGAAGCTGGACCACGGTGTTCTGGCCGTAGGATATGGCA
CTAACGATGGAACCGACTACTGGCTCGTCAAGAACAGTTGGGGCGCGGAG
TGGGGCATGGAGGGATACGTCATGATGTCCAGGAACAAGGAGAACCAGTG
CGGCATCGCCACTGACGCCAGCTACCCTGTCGTCTGAATGAAGCTTTTGA
TCCTCGCTGTCTTCGTCGCTGTGGCAACGGCCATGGACCCTGAGTGGGAG
GCCTTCAAACTTCTTCACGGCAAGGAATACAACAGCCTGTCTGAGGAGAA
CGCTCGGCACTCTATCTTCGAGGAGAACAACAAGATCGTGAAACAGCACA
ACGAGGAGGCAGGCATGGGGAAACATACCTACTTCATGAAGATGAACAAG
TTTGGAGATCTGACAACGGAAGAGTTCCGGATGCTGGTGATCGGGACAGG
TTTCATGCAGACAAACAAGACCCAGCAAGCCGAGGGGGGAGTCTTCGAGA
GAATGCCGGGTCTGAAGGTCAACGACACCGTGGACTGGAGACCGAAAGGT
GCCGTGACGAAGGTCAAGAACCAGGAACAGTGTGGGTCCTGCTGGGCCTT
CAGCGCGACCGGTTCTCTGGAGGGTCAACACTTCATGAAGTCAGGCACGC
TGGTGTCCCTGAGTGAGCAGAACCTGATGGACTGCTCCCGTAAGGAAGGC
AACAAGGGCTGCAAGGGCGGAAGCATGGATCAGGCTTTCAAGTACATCAA
GATGAACGGCGGCATCGACACTGAGGAGTGCTATATGTACAGGGGGAGGG
ACGAGAGAACGTGCAGGTACAAGTCGAGCTGCAGCGGAGCCACCCTGTCC
AGCTTCACGGACATCAAGATGGGAGACGAGATGGCGCTGATGCAGGCTGT
CGGCACCGTCGGACCCATCTCCGTCGCCATTGACGCCGGCCACAAGTCTT
TCCAGCTCTATCATCACGGTGTATACAACGAGCCCATGTGCAGCTCCAAG
AAGCTGGACCACGGTGTTCTGGCCGTAGGATATGGCACTAACGATGGAAC
CGACTACTGGCTCGTCAAGAACAGTTGGGGCGCGGAGTGGGGCATGGAGG
GATACGTCATGATGTCCAGGAACAAGGAGAACCAGTGCGGCATCGCCACT
GACGCCAGCTACCCTGTCGTCTGAATGAAGCTTTTGATCCTCGCTGTCTT
CGTCGCTGTGGCAACGGCCATGGACCCTGAGTGGGAGGCCTTCAAACTTC
TTCACGGCAAGGAATACAACAGCCTGTCTGAGGAGAACGCTCGGCACTCT
ATCTTCGAGGAGAACAACAAGATCGTGAAACAGCACAACGAGGAGGCAGG
CATGGGGAAACATACCTACTTCATGAAGATGAACAAGTTTGGAGATCTGA
CAACGGAAGAGTTCCGGATGCTGGTGATCGGGACAGGTTTCATGCAGACA
AACAAGACCCAGCAAGCCGAGGGGGGAGTCTTCGAGAGAATGCCGGGTCT
GAAGGTCAACGACACCGTGGACTGGAGACCGAAAGGTGCCGTGACGAAGG
TCAAGAACCAGGAACAGTGTGGGTCCTGCTGGGCCTTCAGCGCGACCGGT
TCTCTGGAGGGTCAACACTTCATGAAGTCAGGCACGCTGGTGTCCCTGAG
TGAGCAGAACCTGATGGACTGCTCCCGTAAGGAAGGCAACAAGGGCTGCA
AGGGCGGAAGCATGGATCAGGCTTTCAAGTACATCAAGATGAACGGCGGC
ATCGACACTGAGGAGTGCTATATGTACAGGGGGAGGGACGAGAGAACGTG
CAGGTACAAGTCGAGCTGCAGCGGAGCCACCCTGTCCAGCTTCACGGACA
TCAAGATGGGAGACGAGATGGCGCTGATGCAGGCTGTCGGCACCGTCGGA
CCCATCTCCGTCGCCATTGACGCCGGCCACAAGTCTTTCCAGCTCTATCA
TCACGGTGTATACAACGAGCCCATGTGCAGCTCCAAGAAGCTGGACCACG
GTGTTCTGGCCGTAGGATATGGCACTAACGATGGAACCGACTACTGGCTC
GTCAAGAACAGTTGGGGCGCGGAGTGGGGCATGGAGGGATACGTCATGAT
GTCCAGGAACAAGGAGAACCAGTGCGGCATCGCCACTGACGCCAGCTACC
CTGTCGTCTGAATGAAGCTTTTGATCCTCGCTGTCTTCGTCGCTGTGGCA
ACGGCCATGGACCCTGAGTGGGAGGCCTTCAAACTTCTTCACGGCAAGGA
ATACAACAGCCTGTCTGAGGAGAACGCTCGGCACTCTATCTTCGAGGAGA
ACAACAAGATCGTGAAACAGCACAACGAGGAGGCAGGCATGGGGAAACAT
ACCTACTTCATGAAGATGAACAAGTTTGGAGATCTGACAACGGAAGAGTT
CCGGATGCTGGTGATCGGGACAGGTTTCATGCAGACAAACAAGACCCAGC
AAGCCGAGGGGGGAGTCTTCGAGAGAATGCCGGGTCTGAAGGTCAACGAC
ACCGTGGACTGGAGACCGAAAGGTGCCGTGACGAAGGTCAAGAACCAGGA
ACAGTGTGGGTCCTGCTGGGCCTTCAGCGCGACCGGTTCTCTGGAGGGTC
AACACTTCATGAAGTCAGGCACGCTGGTGTCCCTGAGTGAGCAGAACCTG
ATGGACTGCTCCCGTAAGGAAGGCAACAAGGGCTGCAAGGGCGGAAGCAT
GGATCAGGCTTTCAAGTACATCAAGATGAACGGCGGCATCGACACTGAGG
AGTGCTATATGTACAGGGGGAGGGACGAGAGAACGTGCAGGTACAAGTCG
AGCTGCAGCGGAGCCACCCTGTCCAGCTTCACGGACATCAAGATGGGAGA
CGAGATGGCGCTGATGCAGGCTGTCGGCACCGTCGGACCCATCTCCGTCG
CCATTGACGCCGGCCACAAGTCTTTCCAGCTCTATCATCACGGTGTATAC
AACGAGCCCATGTGCAGCTCCAAGAAGCTGGACCACGGTGTTCTGGCCGT
AGGATATGGCACTAACGATGGAACCGACTACTGGCTCGTCAAGAACAGTT
GGGGCGCGGAGTGGGGCATGGAGGGATACGTCATGATGTCCAGGAACAAG
GAGAACCAGTGCGGCATCGCCACTGACGCCAGCTACCCTGTCGTCTGAAT
GAAGCTTTTGATCCTCGCTGTCTTCGTCGCTGTGGCAACGGCCATGGACC
CTGAGTGGGAGGCCTTCAAACTTCTTCACGGCAAGGAATACAACAGCCTG
TCTGAGGAGAACGCTCGGCACTCTATCTTCGAGGAGAACAACAAGATCGT
GAAACAGCACAACGAGGAGGCAGGCATGGGGAAACATACCTACTTCATGA
AGATGAACAAGTTTGGAGATCTGACAACGGAAGAGTTCCGGATGCTGGTG
ATCGGGACAGGTTTCATGCAGACAAACAAGACCCAGCAAGCCGAGGGGGG
AGTCTTCGAGAGAATGCCGGGTCTGAAGGTCAACGACACCGTGGACTGGA
GACCGAAAGGTGCCGTGACGAAGGTCAAGAACCAGGAACAGTGTGGGTCC
TGCTGGGCCTTCAGCGCGACCGGTTCTCTGGAGGGTCAACACTTCATGAA
GTCAGGCACGCTGGTGTCCCTGAGTGAGCAGAACCTGATGGACTGCTCCC
GTAAGGAAGGCAACAAGGGCTGCAAGGGCGGAAGCATGGATCAGGCTTTC
AAGTACATCAAGATGAACGGCGGCATCGACACTGAGGAGTGCTATATGTA
CAGGGGGAGGGACGAGAGAACGTGCAGGTACAAGTCGAGCTGCAGCGGAG
CCACCCTGTCCAGCTTCACGGACATCAAGATGGGAGACGAGATGGCGCTG
ATGCAGGCTGTCGGCACCGTCGGACCCATCTCCGTCGCCATTGACGCCGG
CCACAAGTCTTTCCAGCTCTATCATCACGGTGTATACAACGAGCCCATGT
GCAGCTCCAAGAAGCTGGACCACGGTGTTCTGGCCGTAGGATATGGCACT
AACGATGGAACCGACTACTGGCTCGTCAAGAACAGTTGGGGCGCGGAGTG
GGGCATGGAGGGATACGTCATGATGTCCAGGAACAAGGAGAACCAGTGCG
GCATCGCCACTGACGCCAGCTACCCTGTCGTCTGAATGAAGCTTTTGATC
CTCGCTGTCTTCGTCGCTGTGGCAACGGCCATGGACCCTGAGTGGGAGGC
CTTCAAACTTCTTCACGGCAAGGAATACAACAGCCTGTCTGAGGAGAACG
CTCGGCACTCTATCTTCGAGGAGAACAACAAGATCGTGAAACAGCACAAC
GAGGAGGCAGGCATGGGGAAACATACCTACTTCATGAAGATGAACAAGTT
TGGAGATCTGACAACGGAAGAGTTCCGGATGCTGGTGATCGGGACAGGTT
TCATGCAGACAAACAAGACCCAGCAAGCCGAGGGGGGAGTCTTCGAGAGA
ATGCCGGGTCTGAAGGTCAACGACACCGTGGACTGGAGACCGAAAGGTGC
CGTGACGAAGGTCAAGAACCAGGAACAGTGTGGGTCCTGCTGGGCCTTCA
GCGCGACCGGTTCTCTGGAGGGTCAACACTTCATGAAGTCAGGCACGCTG
GTGTCCCTGAGTGAGCAGAACCTGATGGACTGCTCCCGTAAGGAAGGCAA
CAAGGGCTGCAAGGGCGGAAGCATGGATCAGGCTTTCAAGTACATCAAGA
TGAACGGCGGCATCGACACTGAGGAGTGCTATATGTACAGGGGGAGGGAC
GAGAGAACGTGCAGGTACAAGTCGAGCTGCAGCGGAGCCACCCTGTCCAG
CTTCACGGACATCAAGATGGGAGACGAGATGGCGCTGATGCAGGCTGTCG
GCACCGTCGGACCCATCTCCGTCGCCATTGACGCCGGCCACAAGTCTTTC
CAGCTCTATCATCACGGTGTATACAACGAGCCCATGTGCAGCTCCAAGAA
GCTGGACCACGGTGTTCTGGCCGTAGGATATGGCACTAACGATGGAACCG
ACTACTGGCTCGTCAAGAACAGTTGGGGCGCGGAGTGGGGCATGGAGGGA
TACGTCATGATGTCCAGGAACAAGGAGAACCAGTGCGGCATCGCCACTGA
CGCCAGCTACCCTGTCGTCTGAATGAAGCTTTTGATCCTCGCTGTCTTCG
TCGCTGTGGCAACGGCCATGGACCCTGAGTGGGAGGCCTTCAAACTTCTT
CACGGCAAGGAATACAACAGCCTGTCTGAGGAGAACGCTCGGCACTCTAT
CTTCGAGGAGAACAACAAGATCGTGAAACAGCACAACGAGGAGGCAGGCA
TGGGGAAACATACCTACTTCATGAAGATGAACAAGTTTGGAGATCTGACA
ACGGAAGAGTTCCGGATGCTGGTGATCGGGACAGGTTTCATGCAGACAAA
CAAGACCCAGCAAGCCGAGGGGGGAGTCTTCGAGAGAATGCCGGGTCTGA
AGGTCAACGACACCGTGGACTGGAGACCGAAAGGTGCCGTGACGAAGGTC
AAGAACCAGGAACAGTGTGGGTCCTGCTGGGCCTTCAGCGCGACCGGTTC
TCTGGAGGGTCAACACTTCATGAAGTCAGGCACGCTGGTGTCCCTGAGTG
AGCAGAACCTGATGGACTGCTCCCGTAAGGAAGGCAACAAGGGCTGCAAG
GGCGGAAGCATGGATCAGGCTTTCAAGTACATCAAGATGAACGGCGGCAT
CGACACTGAGGAGTGCTATATGTACAGGGGGAGGGACGAGAGAACGTGCA
GGTACAAGTCGAGCTGCAGCGGAGCCACCCTGTCCAGCTTCACGGACATC
AAGATGGGAGACGAGATGGCGCTGATGCAGGCTGTCGGCACCGTCGGACC
CATCTCCGTCGCCATTGACGCCGGCCACAAGTCTTTCCAGCTCTATCATC
ACGGTGTATACAACGAGCCCATGTGCAGCTCCAAGAAGCTGGACCACGGT
GTTCTGGCCGTAGGATATGGCACTAACGATGGAACCGACTACTGGCTCGT
CAAGAACAGTTGGGGCGCGGAGTGGGGCATGGAGGGATACGTCATGATGT
CCAGGAACAAGGAGAACCAGTGCGGCATCGCCACTGACGCCAGCTACCCT
GTCGTCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000506 | genome | Sc0000506:32807..35936 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96106_evm0 |
| Biotype | protein_coding |
|
