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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96055_evm0 >transcript:BL96055_evm0-protein ID=transcript:BL96055_evm0-protein|Name=transcript:BL96055_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=329bp
MLPAISFSLVFLLASAAEGRSLTGCLFSDGRVYPPGEFSPARCTRCTCMT
TQVSPGRNKYLPICVSTCDPDARDTVTIPTTGDPPTTTPQTTIPWTTTFP
WTTTTSNLPCWAYLRFTCPDLDCQGHGSVPHDYANCRCGYCLCPTEANSR
PWSCDSPTTIPTTTIPFTWPTTATTTPMLPCRDYLRFTCPTLNCPDAIPH
DYANCVCGYCPNGPATTVPTTIPTTAPTTTPPFLTTTPPFLTTTTSHYGC
WHHGWKFTCPYYKPCVDATPDDYTNCRCGQCPNGPNCYAWDGTIISAGEA
VEVDGATCQCHEWFGSSHFADCDFGALTG Run BLAST on NCBI mRNA from alignment at Sc0000358:26917..28897- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96055_evm0 ID=transcript:BL96055_evm0|Name=transcript:BL96055_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1981bp|location=Sequence derived from alignment at Sc0000358:26917..28897- (Branchiostoma lanceolatum)
ATGCTGCCCGCCATTTCCTTCTCCCTCGTGTTTCTCCTGGCCAGCGCTGC
CGAAGGTAGGAGCCTGACCGGCTGTCTGTTCTCAGACGGACGGGTGTATC
CTCCCGGGGAGTTCAGCCCGGCCAGGTGTACCCGCTGCACCTGTATGACG
ACACAGGTGTCCCCAGGACGAAACAAGTACCTTCCCATATGTGTGAGCAC
CTGCGACCCTGATGGTACGTTTTCACCGTTATTTTGATATTTCTAATGAC
ACTCAAGAGCATATCTTTACTATGTAAATATTGGAAAAACAAAGGGAAGG
GACAAGGGGTATAACAAGTGATTTGGGGCTCCATGGCATTTCATTTTATT
CCAAGTTTCAAGAGTAAACAGGCCCATGTAATAGCAACGTTAGATTACTT
GTTATCCCTTGCAGCAAGGGACACAGTGACCATTCCCACCACCGGAGACC
CTCCCACCACCACGCCCCAGACCACCATCCCCTGGACAACGACCTTCCCC
TGGACAACAACCACGTCCAACCTTCCGTGCTGGGCCTACCTGAGGTTCAC
CTGCCCTGACCTCGACTGTCAGGGTCACGGGTCCGTACCGCACGACTATG
CCAACTGCAGGTGCGGCTACTGCCTCTGCCCTGAAGATCCGTCCTCACAG
ACTACCAGCCGGCCGTGGTCATGCCCTACCACCATCCCACCCACCACTCG
TACCACCGTCCCCTTCACCTGGCCCACCACCACCCCGCCCACTACCGCCA
CCACCACGTCCAACCTTCCGTGCTGGGCCTACCTGAGATTCACCTGTCCT
GACCTGGACTGTCAGGGTCACGAGTCCGTACCGCACGACTATGCCAACTG
CAGGTGTGGCTACTGTCTCTGTCCTACAGAGGCTAACAGCCGGCCGTGGT
CATGTGATAGTCCTACCACCATCCCTACCACCACCATACCCTTCACCTGG
CCCACTACCGCCACCACCACGCCGATGCTTCCCTGTCGGGACTACCTGAG
ATTCACCTGTCCCACTCTGAACTGTCCGGACGCCATACCTCACGACTATG
CCAACTGTGTGTGCGGTTACTGTCCTAACGGTACGGCTACATATTCCTGT
TTGTGCTGTCGACCCAAGCAGTGACAGTGATATTTTTCATCAATTGCTGT
ATGTGTTTGTTGAATTGTATGTTGGCTTAGTTTCAGCCACCCTCAAGTGG
TAACGAAATGTACCTTCTCGGATTCTTTCCTCGATTTAATACTAATAGTA
TGTTGAGTAGGATGTTATATTTAGCTGCCGTAATTCCTGGCACCAGCAGT
TTATACAATGAAACATTTTTGAAGAGTCGCTGTTATATATTCCGTTGTCG
CAACATGTCGTGATTGATCGATTGTTATGTGATTGCCTCCAGGTCCTGCG
ACCACCGTGCCGACAACCATACCAACCACAGCCCCAACCACGACTCCTCC
ATTCCTCACCACGACCCCTCCATTCCTCACCACCACCACGAGTCACTACG
GCTGCTGGCACCACGGCTGGAAGTTCACCTGTCCCTACTACAAGCCTTGT
GTGGACGCGACACCGGACGACTACACCAACTGCAGATGTGGGCAGTGTCC
AAACGGTACATTTTTTGTGAATATCTATAAAGGTGTGCTTGCATAACTTT
AAGCACAGTGCCCGTGGGATGTGATTAGGCGATAGGAAAATCATGTGAGT
CTCCTGTTTGATAGGAAGTAATGTGGATGCGTGTACTTGTAGCAAAATAG
ATTTAAGAATGAACTTTTTTCATAATCCCAATATAGCATTATCAAGAAGA
TTCAACACATCTGATTCAAGATATTGTTTTTTTTTTCAAAGGACCCAACT
GTTACGCCTGGGACGGAACCATTATCTCTGCAGGGGAGGCTGTTGAGGTG
GACGGTGCCACTTGTCAGTGCCACGAGTGGTTCGGCTCCTCACATTTCGC
CGACTGTGACTTTGGCGCCCTCACTGGCTGA Coding sequence (CDS) from alignment at Sc0000358:26917..28897- >transcript:BL96055_evm0 ID=transcript:BL96055_evm0|Name=transcript:BL96055_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4950bp|location=Sequence derived from alignment at Sc0000358:26917..28897- (Branchiostoma lanceolatum)
ATGCTGCCCGCCATTTCCTTCTCCCTCGTGTTTCTCCTGGCCAGCGCTGC
CGAAGGTAGGAGCCTGACCGGCTGTCTGTTCTCAGACGGACGGGTGTATC
CTCCCGGGGAGTTCAGCCCGGCCAGGTGTACCCGCTGCACCTGTATGACG
ACACAGGTGTCCCCAGGACGAAACAAGTACCTTCCCATATGTGTGAGCAC
CTGCGACCCTGATGCAAGGGACACAGTGACCATTCCCACCACCGGAGACC
CTCCCACCACCACGCCCCAGACCACCATCCCCTGGACAACGACCTTCCCC
TGGACAACAACCACGTCCAACCTTCCGTGCTGGGCCTACCTGAGGTTCAC
CTGCCCTGACCTCGACTGTCAGGGTCACGGGTCCGTACCGCACGACTATG
CCAACTGCAGGTGTGGCTACTGTCTCTGTCCTACAGAGGCTAACAGCCGG
CCGTGGTCATGTGATAGTCCTACCACCATCCCTACCACCACCATACCCTT
CACCTGGCCCACTACCGCCACCACCACGCCGATGCTTCCCTGTCGGGACT
ACCTGAGATTCACCTGTCCCACTCTGAACTGTCCGGACGCCATACCTCAC
GACTATGCCAACTGTGTGTGCGGTTACTGTCCTAACGGTCCTGCGACCAC
CGTGCCGACAACCATACCAACCACAGCCCCAACCACGACTCCTCCATTCC
TCACCACGACCCCTCCATTCCTCACCACCACCACGAGTCACTACGGCTGC
TGGCACCACGGCTGGAAGTTCACCTGTCCCTACTACAAGCCTTGTGTGGA
CGCGACACCGGACGACTACACCAACTGCAGATGTGGGCAGTGTCCAAACG
GACCCAACTGTTACGCCTGGGACGGAACCATTATCTCTGCAGGGGAGGCT
GTTGAGGTGGACGGTGCCACTTGTCAGTGCCACGAGTGGTTCGGCTCCTC
ACATTTCGCCGACTGTGACTTTGGCGCCCTCACTGGCTGAATGCTGCCCG
CCATTTCCTTCTCCCTCGTGTTTCTCCTGGCCAGCGCTGCCGAAGGTAGG
AGCCTGACCGGCTGTCTGTTCTCAGACGGACGGGTGTATCCTCCCGGGGA
GTTCAGCCCGGCCAGGTGTACCCGCTGCACCTGTATGACGACACAGGTGT
CCCCAGGACGAAACAAGTACCTTCCCATATGTGTGAGCACCTGCGACCCT
GATGCAAGGGACACAGTGACCATTCCCACCACCGGAGACCCTCCCACCAC
CACGCCCCAGACCACCATCCCCTGGACAACGACCTTCCCCTGGACAACAA
CCACGTCCAACCTTCCGTGCTGGGCCTACCTGAGGTTCACCTGCCCTGAC
CTCGACTGTCAGGGTCACGGGTCCGTACCGCACGACTATGCCAACTGCAG
GTGTGGCTACTGTCTCTGTCCTACAGAGGCTAACAGCCGGCCGTGGTCAT
GTGATAGTCCTACCACCATCCCTACCACCACCATACCCTTCACCTGGCCC
ACTACCGCCACCACCACGCCGATGCTTCCCTGTCGGGACTACCTGAGATT
CACCTGTCCCACTCTGAACTGTCCGGACGCCATACCTCACGACTATGCCA
ACTGTGTGTGCGGTTACTGTCCTAACGGTCCTGCGACCACCGTGCCGACA
ACCATACCAACCACAGCCCCAACCACGACTCCTCCATTCCTCACCACGAC
CCCTCCATTCCTCACCACCACCACGAGTCACTACGGCTGCTGGCACCACG
GCTGGAAGTTCACCTGTCCCTACTACAAGCCTTGTGTGGACGCGACACCG
GACGACTACACCAACTGCAGATGTGGGCAGTGTCCAAACGGACCCAACTG
TTACGCCTGGGACGGAACCATTATCTCTGCAGGGGAGGCTGTTGAGGTGG
ACGGTGCCACTTGTCAGTGCCACGAGTGGTTCGGCTCCTCACATTTCGCC
GACTGTGACTTTGGCGCCCTCACTGGCTGAATGCTGCCCGCCATTTCCTT
CTCCCTCGTGTTTCTCCTGGCCAGCGCTGCCGAAGGTAGGAGCCTGACCG
GCTGTCTGTTCTCAGACGGACGGGTGTATCCTCCCGGGGAGTTCAGCCCG
GCCAGGTGTACCCGCTGCACCTGTATGACGACACAGGTGTCCCCAGGACG
AAACAAGTACCTTCCCATATGTGTGAGCACCTGCGACCCTGATGCAAGGG
ACACAGTGACCATTCCCACCACCGGAGACCCTCCCACCACCACGCCCCAG
ACCACCATCCCCTGGACAACGACCTTCCCCTGGACAACAACCACGTCCAA
CCTTCCGTGCTGGGCCTACCTGAGGTTCACCTGCCCTGACCTCGACTGTC
AGGGTCACGGGTCCGTACCGCACGACTATGCCAACTGCAGGTGTGGCTAC
TGTCTCTGTCCTACAGAGGCTAACAGCCGGCCGTGGTCATGTGATAGTCC
TACCACCATCCCTACCACCACCATACCCTTCACCTGGCCCACTACCGCCA
CCACCACGCCGATGCTTCCCTGTCGGGACTACCTGAGATTCACCTGTCCC
ACTCTGAACTGTCCGGACGCCATACCTCACGACTATGCCAACTGTGTGTG
CGGTTACTGTCCTAACGGTCCTGCGACCACCGTGCCGACAACCATACCAA
CCACAGCCCCAACCACGACTCCTCCATTCCTCACCACGACCCCTCCATTC
CTCACCACCACCACGAGTCACTACGGCTGCTGGCACCACGGCTGGAAGTT
CACCTGTCCCTACTACAAGCCTTGTGTGGACGCGACACCGGACGACTACA
CCAACTGCAGATGTGGGCAGTGTCCAAACGGACCCAACTGTTACGCCTGG
GACGGAACCATTATCTCTGCAGGGGAGGCTGTTGAGGTGGACGGTGCCAC
TTGTCAGTGCCACGAGTGGTTCGGCTCCTCACATTTCGCCGACTGTGACT
TTGGCGCCCTCACTGGCTGAATGCTGCCCGCCATTTCCTTCTCCCTCGTG
TTTCTCCTGGCCAGCGCTGCCGAAGGTAGGAGCCTGACCGGCTGTCTGTT
CTCAGACGGACGGGTGTATCCTCCCGGGGAGTTCAGCCCGGCCAGGTGTA
CCCGCTGCACCTGTATGACGACACAGGTGTCCCCAGGACGAAACAAGTAC
CTTCCCATATGTGTGAGCACCTGCGACCCTGATGCAAGGGACACAGTGAC
CATTCCCACCACCGGAGACCCTCCCACCACCACGCCCCAGACCACCATCC
CCTGGACAACGACCTTCCCCTGGACAACAACCACGTCCAACCTTCCGTGC
TGGGCCTACCTGAGGTTCACCTGCCCTGACCTCGACTGTCAGGGTCACGG
GTCCGTACCGCACGACTATGCCAACTGCAGGTGTGGCTACTGTCTCTGTC
CTACAGAGGCTAACAGCCGGCCGTGGTCATGTGATAGTCCTACCACCATC
CCTACCACCACCATACCCTTCACCTGGCCCACTACCGCCACCACCACGCC
GATGCTTCCCTGTCGGGACTACCTGAGATTCACCTGTCCCACTCTGAACT
GTCCGGACGCCATACCTCACGACTATGCCAACTGTGTGTGCGGTTACTGT
CCTAACGGTCCTGCGACCACCGTGCCGACAACCATACCAACCACAGCCCC
AACCACGACTCCTCCATTCCTCACCACGACCCCTCCATTCCTCACCACCA
CCACGAGTCACTACGGCTGCTGGCACCACGGCTGGAAGTTCACCTGTCCC
TACTACAAGCCTTGTGTGGACGCGACACCGGACGACTACACCAACTGCAG
ATGTGGGCAGTGTCCAAACGGACCCAACTGTTACGCCTGGGACGGAACCA
TTATCTCTGCAGGGGAGGCTGTTGAGGTGGACGGTGCCACTTGTCAGTGC
CACGAGTGGTTCGGCTCCTCACATTTCGCCGACTGTGACTTTGGCGCCCT
CACTGGCTGAATGCTGCCCGCCATTTCCTTCTCCCTCGTGTTTCTCCTGG
CCAGCGCTGCCGAAGGTAGGAGCCTGACCGGCTGTCTGTTCTCAGACGGA
CGGGTGTATCCTCCCGGGGAGTTCAGCCCGGCCAGGTGTACCCGCTGCAC
CTGTATGACGACACAGGTGTCCCCAGGACGAAACAAGTACCTTCCCATAT
GTGTGAGCACCTGCGACCCTGATGCAAGGGACACAGTGACCATTCCCACC
ACCGGAGACCCTCCCACCACCACGCCCCAGACCACCATCCCCTGGACAAC
GACCTTCCCCTGGACAACAACCACGTCCAACCTTCCGTGCTGGGCCTACC
TGAGGTTCACCTGCCCTGACCTCGACTGTCAGGGTCACGGGTCCGTACCG
CACGACTATGCCAACTGCAGGTGTGGCTACTGTCTCTGTCCTACAGAGGC
TAACAGCCGGCCGTGGTCATGTGATAGTCCTACCACCATCCCTACCACCA
CCATACCCTTCACCTGGCCCACTACCGCCACCACCACGCCGATGCTTCCC
TGTCGGGACTACCTGAGATTCACCTGTCCCACTCTGAACTGTCCGGACGC
CATACCTCACGACTATGCCAACTGTGTGTGCGGTTACTGTCCTAACGGTC
CTGCGACCACCGTGCCGACAACCATACCAACCACAGCCCCAACCACGACT
CCTCCATTCCTCACCACGACCCCTCCATTCCTCACCACCACCACGAGTCA
CTACGGCTGCTGGCACCACGGCTGGAAGTTCACCTGTCCCTACTACAAGC
CTTGTGTGGACGCGACACCGGACGACTACACCAACTGCAGATGTGGGCAG
TGTCCAAACGGACCCAACTGTTACGCCTGGGACGGAACCATTATCTCTGC
AGGGGAGGCTGTTGAGGTGGACGGTGCCACTTGTCAGTGCCACGAGTGGT
TCGGCTCCTCACATTTCGCCGACTGTGACTTTGGCGCCCTCACTGGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000358 | genome | Sc0000358:26917..28897 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96055_evm0 |
| Biotype | protein_coding |
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