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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96051_evm3 >transcript:BL96051_evm3-protein ID=transcript:BL96051_evm3-protein|Name=transcript:BL96051_evm3|organism=Branchiostoma lanceolatum|type=polypeptide|length=460bp
MEDDMDVEDAGGRVSDGGGRVSDGGGRVSDGGGRVSDGGGRVSDGGGRVS
DGGGRVSDGGGRVSDGGGRVSDGGGRVSDGGGRVSDGGGRVSDGGGRVSD
GGSESGSDEDSGSSRESGGGGGGGKRIWQLFVVGLGGGTTIIRIHRDATV
DELINAISASNNIPPEAQRVLYTTKQLEYGRGKRLSDYNMQDQSTLFVVL
RLQGGSNAGLEEDEETSEVPSLISGSDDPDTPRVRMSCGHAITTETLTIY
CENLLKDGKYIFQCPHISETTGEHCGKEWPYPEVSDRAALPQEKRKRFEK
GIAKNYLRIGMGIQRCPKCRSYCERLRCYHRRNERVRVVCRLCSTVFCWY
CLQEWVASGTVVCGNNDCSGEDRRLRYLRNFQRRTIVGVPDCPGVRACPR
CGILITHDRACKHMTCICSLKFCFICLKPAVHGEYQCGPFNSPCEVAHVQ
TSIPGDQRET Run BLAST on NCBI mRNA from alignment at Sc0000357:77072..79709- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96051_evm3 ID=transcript:BL96051_evm3|Name=transcript:BL96051_evm3|organism=Branchiostoma lanceolatum|type=mRNA|length=2638bp|location=Sequence derived from alignment at Sc0000357:77072..79709- (Branchiostoma lanceolatum)
ATGGAGGACGATATGGATGTCGAGGACGCTGGGGGCCGTGTGTCGGACGG
TGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCC
GTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCG
GACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGG
GGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTG
TGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGAC
GGTGGGTCGGAAAGTGGGAGCGATGAGGACTCGGGCAGCAGTCGGGAGTC
TGGGGGCGGTGGAGGTGGCGGCAAACGAATTTGGCAGCTTTTCGTCGTGG
GCCTCGGGGGAGGAACAACCATTATAAGGATCCACAGGGTATTTATCAAC
TTTACTTCAAAAACTCGCATTTCTATCCTGAGATTGTAGACAGATAAGTT
GATGGTTCCATTTCGTTTTGGCGCCCGTAGACACGTGCATCGACAATATT
GAGATTCAGCTGCAGAATCGTAAAATCTACATGTATGAAGAGAACCAGCT
GCGGAATTTGCATTGTAACCTTCAAACCTGGCTAGCAGTGTTTCCCGGCA
AATTCAATTATCATCTGACTTTATTCTTAAGACCAAGACGAACGAACGGG
ACTGTTTTAAGTTTGTTTCTTAGTAGTGGAAGGTGGTCGGAGTGCAAACT
GGGAATAATCTCTAAGTAGATGTGTGGCTTCTGTTTGTTTGCGTTTGTTT
TCCTTTTCAGGAAAAAAAATCTTGCAGTAGCGGCACTAGCATTAGAATAG
AATAGTTGTGGAGTTTGACAATACATTAGAATTCGGTGAAAATTGTCCTA
ATGAGGATATTGTTTTCATAATTAAAGGCAGAAATGCTAGGGAGTAATTC
CTTTTTAGTCCTTAGTCTTAGTTATTCTTCTTTAAGCAACTATTGTGAAC
CTTTCTCTATGGAATGTTTTTAATGATTGATTGTTCTTTGATCACGACTG
TCCGCCATGATTCATACTCAGCTCCCTGTTCATGCAGGATGCCACAGTGG
ACGAACTGATCAACGCAATCAGCGCGAGCAACAACATCCCTCCTGAGGCA
CAGCGCGTGCTGTACACCACCAAGCAGCTGGAGTATGGCCGGGGGAAACG
TCTCTCCGACTACAACATGCAGGACCAGTCCACTCTGTTTGTCGTCTTAC
GGCTGCAGGGTGGCAGCAACGCTGGCCTGGAAGAGGACGAGGAGACTTCC
GAGGTCCCCAGCCTGATCAGTGGGTCGGATGACCCCGACACTCCCCGCGT
CAGGATGTCCTGTGGGCACGCCATCACAACGGAGACGCTCACCATATACT
GCGAGAATCTTCTGAAGTAAACAGTTGTCAGTTGTAATATATAATTTGTA
TATGATACATGTAAAAAGGTAGTGAAGCCGGTCAAGCGATTGCAAGGCTA
TACGTTAGGTAATGTTCTATGTTGTTTAGTATAACCGAAAACAGTCATGA
ACTGTCTTCGAAGGGTTTAGTTAACCCAAGGATCAGGAGTAATCTCTGGT
GGCTATGACAGCCGAACTCCAGCCACGACACCAGTCAGATTAACCTTGAT
CTACAACTGCGACAGTAGTGTACTTGTGAAGCTCTTTTAATTTTAAAGCA
TCAGCACTTTTTTTTCTGAACAGGTTGCTTTCTATGTACATTATAGATCA
TTGGCCCTTTCCTATATATATATATCAATGTTTCAGGGATGGGAAGTACA
TCTTCCAGTGTCCCCACATCAGCGAAACAACCGGAGAGCATTGTGGGAAG
GAGTGGCCCTATCCGGAGGTCAGTGACCGCGCCGCTCTTCCTCAGGAAAA
ACGAAAAAGGTTCGAGAAAGGTATCGCCAAAAACTATTTACGTATCGGGA
TGGGCATCCAGAGGTGTCCAAAGTGTAGGTCCTACTGCGAGCGGTTAAGA
TGTTATCACAGGCGCAATGAGCGCGTGCGCGTGGTGTGCCGCCTGTGTTC
AACTGTGTTCTGCTGGTACTGCCTGCAGGAGTGGGTCGCGAGTGGTACGG
TCGTCTGCGGCAATAACGACTGTAGTGGCGAAGACAGGCGTCTGAGGTAC
CTCCGCAACTTCCAGCGAAGGACCATCGTGGGAGTACCGGACTGTCCCGG
CGTCAGGGCCTGCCCGAGGTGCGGCATACTCATCACACACGACAGGGCAT
GCAAGCACATGGTAATATTCCCTTACGATGCTTTGTGTTTTAAAGAACCG
GCAGTATTTTTCAATGTCATCCTTTCAACGGCATCATTTGACTGATGCTC
TGTGAACTTGGGTGTAAACCTTATTTAACTTTGAACGCCCACAGCGGTTT
AATGACTTTTCGAAGTCATTTTCAAAACCTGGATGCACTTGGTGTCTTTT
GTATAGATGTGTATTAGAGGCTAAGTCTTATGTTCCCCTGTATCCAGACC
TGCATCTGTAGCCTGAAGTTCTGTTTCATCTGCCTGAAGCCTGCTGTCCA
TGGTGAGTACCAGTGCGGCCCCTTCAACAGCCCGTGCGAGGTCGCCCACG
TGCAGACAAGCATTCCCGGGGACCAACGAGAAACATAG Coding sequence (CDS) from alignment at Sc0000357:77072..79709- >transcript:BL96051_evm3 ID=transcript:BL96051_evm3|Name=transcript:BL96051_evm3|organism=Branchiostoma lanceolatum|type=CDS|length=5532bp|location=Sequence derived from alignment at Sc0000357:77072..79709- (Branchiostoma lanceolatum)
ATGGAGGACGATATGGATGTCGAGGACGCTGGGGGCCGTGTGTCGGACGG
TGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCC
GTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCG
GACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGG
GGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTG
TGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGAC
GGTGGGTCGGAAAGTGGGAGCGATGAGGACTCGGGCAGCAGTCGGGAGTC
TGGGGGCGGTGGAGGTGGCGGCAAACGAATTTGGCAGCTTTTCGTCGTGG
GCCTCGGGGGAGGAACAACCATTATAAGGATCCACAGGGATGCCACAGTG
GACGAACTGATCAACGCAATCAGCGCGAGCAACAACATCCCTCCTGAGGC
ACAGCGCGTGCTGTACACCACCAAGCAGCTGGAGTATGGCCGGGGGAAAC
GTCTCTCCGACTACAACATGCAGGACCAGTCCACTCTGTTTGTCGTCTTA
CGGCTGCAGGGTGGCAGCAACGCTGGCCTGGAAGAGGACGAGGAGACTTC
CGAGGTCCCCAGCCTGATCAGTGGGTCGGATGACCCCGACACTCCCCGCG
TCAGGATGTCCTGTGGGCACGCCATCACAACGGAGACGCTCACCATATAC
TGCGAGAATCTTCTGAAGGATGGGAAGTACATCTTCCAGTGTCCCCACAT
CAGCGAAACAACCGGAGAGCATTGTGGGAAGGAGTGGCCCTATCCGGAGG
TCAGTGACCGCGCCGCTCTTCCTCAGGAAAAACGAAAAAGGTTCGAGAAA
GGTATCGCCAAAAACTATTTACGTATCGGGATGGGCATCCAGAGGTGTCC
AAAGTGTAGGTCCTACTGCGAGCGGTTAAGATGTTATCACAGGCGCAATG
AGCGCGTGCGCGTGGTGTGCCGCCTGTGTTCAACTGTGTTCTGCTGGTAC
TGCCTGCAGGAGTGGGTCGCGAGTGGTACGGTCGTCTGCGGCAATAACGA
CTGTAGTGGCGAAGACAGGCGTCTGAGGTACCTCCGCAACTTCCAGCGAA
GGACCATCGTGGGAGTACCGGACTGTCCCGGCGTCAGGGCCTGCCCGAGG
TGCGGCATACTCATCACACACGACAGGGCATGCAAGCACATGACCTGCAT
CTGTAGCCTGAAGTTCTGTTTCATCTGCCTGAAGCCTGCTGTCCATGGTG
AGTACCAGTGCGGCCCCTTCAACAGCCCGTGCGAGGTCGCCCACGTGCAG
ACAAGCATTCCCGGGGACCAACGAGAAACATAGATGGAGGACGATATGGA
TGTCGAGGACGCTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGG
ACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGG
GGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGT
GTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACG
GTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGC
CGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGTCGGAAAGTGG
GAGCGATGAGGACTCGGGCAGCAGTCGGGAGTCTGGGGGCGGTGGAGGTG
GCGGCAAACGAATTTGGCAGCTTTTCGTCGTGGGCCTCGGGGGAGGAACA
ACCATTATAAGGATCCACAGGGATGCCACAGTGGACGAACTGATCAACGC
AATCAGCGCGAGCAACAACATCCCTCCTGAGGCACAGCGCGTGCTGTACA
CCACCAAGCAGCTGGAGTATGGCCGGGGGAAACGTCTCTCCGACTACAAC
ATGCAGGACCAGTCCACTCTGTTTGTCGTCTTACGGCTGCAGGGTGGCAG
CAACGCTGGCCTGGAAGAGGACGAGGAGACTTCCGAGGTCCCCAGCCTGA
TCAGTGGGTCGGATGACCCCGACACTCCCCGCGTCAGGATGTCCTGTGGG
CACGCCATCACAACGGAGACGCTCACCATATACTGCGAGAATCTTCTGAA
GGATGGGAAGTACATCTTCCAGTGTCCCCACATCAGCGAAACAACCGGAG
AGCATTGTGGGAAGGAGTGGCCCTATCCGGAGGTCAGTGACCGCGCCGCT
CTTCCTCAGGAAAAACGAAAAAGGTTCGAGAAAGGTATCGCCAAAAACTA
TTTACGTATCGGGATGGGCATCCAGAGGTGTCCAAAGTGTAGGTCCTACT
GCGAGCGGTTAAGATGTTATCACAGGCGCAATGAGCGCGTGCGCGTGGTG
TGCCGCCTGTGTTCAACTGTGTTCTGCTGGTACTGCCTGCAGGAGTGGGT
CGCGAGTGGTACGGTCGTCTGCGGCAATAACGACTGTAGTGGCGAAGACA
GGCGTCTGAGGTACCTCCGCAACTTCCAGCGAAGGACCATCGTGGGAGTA
CCGGACTGTCCCGGCGTCAGGGCCTGCCCGAGGTGCGGCATACTCATCAC
ACACGACAGGGCATGCAAGCACATGACCTGCATCTGTAGCCTGAAGTTCT
GTTTCATCTGCCTGAAGCCTGCTGTCCATGGTGAGTACCAGTGCGGCCCC
TTCAACAGCCCGTGCGAGGTCGCCCACGTGCAGACAAGCATTCCCGGGGA
CCAACGAGAAACATAGATGGAGGACGATATGGATGTCGAGGACGCTGGGG
GCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTG
TCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGG
TGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCC
GTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCG
GACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGG
GGGCCGTGTGTCGGACGGTGGGTCGGAAAGTGGGAGCGATGAGGACTCGG
GCAGCAGTCGGGAGTCTGGGGGCGGTGGAGGTGGCGGCAAACGAATTTGG
CAGCTTTTCGTCGTGGGCCTCGGGGGAGGAACAACCATTATAAGGATCCA
CAGGGATGCCACAGTGGACGAACTGATCAACGCAATCAGCGCGAGCAACA
ACATCCCTCCTGAGGCACAGCGCGTGCTGTACACCACCAAGCAGCTGGAG
TATGGCCGGGGGAAACGTCTCTCCGACTACAACATGCAGGACCAGTCCAC
TCTGTTTGTCGTCTTACGGCTGCAGGGTGGCAGCAACGCTGGCCTGGAAG
AGGACGAGGAGACTTCCGAGGTCCCCAGCCTGATCAGTGGGTCGGATGAC
CCCGACACTCCCCGCGTCAGGATGTCCTGTGGGCACGCCATCACAACGGA
GACGCTCACCATATACTGCGAGAATCTTCTGAAGGATGGGAAGTACATCT
TCCAGTGTCCCCACATCAGCGAAACAACCGGAGAGCATTGTGGGAAGGAG
TGGCCCTATCCGGAGGTCAGTGACCGCGCCGCTCTTCCTCAGGAAAAACG
AAAAAGGTTCGAGAAAGGTATCGCCAAAAACTATTTACGTATCGGGATGG
GCATCCAGAGGTGTCCAAAGTGTAGGTCCTACTGCGAGCGGTTAAGATGT
TATCACAGGCGCAATGAGCGCGTGCGCGTGGTGTGCCGCCTGTGTTCAAC
TGTGTTCTGCTGGTACTGCCTGCAGGAGTGGGTCGCGAGTGGTACGGTCG
TCTGCGGCAATAACGACTGTAGTGGCGAAGACAGGCGTCTGAGGTACCTC
CGCAACTTCCAGCGAAGGACCATCGTGGGAGTACCGGACTGTCCCGGCGT
CAGGGCCTGCCCGAGGTGCGGCATACTCATCACACACGACAGGGCATGCA
AGCACATGACCTGCATCTGTAGCCTGAAGTTCTGTTTCATCTGCCTGAAG
CCTGCTGTCCATGGTGAGTACCAGTGCGGCCCCTTCAACAGCCCGTGCGA
GGTCGCCCACGTGCAGACAAGCATTCCCGGGGACCAACGAGAAACATAGA
TGGAGGACGATATGGATGTCGAGGACGCTGGGGGCCGTGTGTCGGACGGT
GGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCG
TGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGG
ACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGG
GGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGT
GTCGGACGGTGGGGGCCGTGTGTCGGACGGTGGGGGCCGTGTGTCGGACG
GTGGGTCGGAAAGTGGGAGCGATGAGGACTCGGGCAGCAGTCGGGAGTCT
GGGGGCGGTGGAGGTGGCGGCAAACGAATTTGGCAGCTTTTCGTCGTGGG
CCTCGGGGGAGGAACAACCATTATAAGGATCCACAGGGATGCCACAGTGG
ACGAACTGATCAACGCAATCAGCGCGAGCAACAACATCCCTCCTGAGGCA
CAGCGCGTGCTGTACACCACCAAGCAGCTGGAGTATGGCCGGGGGAAACG
TCTCTCCGACTACAACATGCAGGACCAGTCCACTCTGTTTGTCGTCTTAC
GGCTGCAGGGTGGCAGCAACGCTGGCCTGGAAGAGGACGAGGAGACTTCC
GAGGTCCCCAGCCTGATCAGTGGGTCGGATGACCCCGACACTCCCCGCGT
CAGGATGTCCTGTGGGCACGCCATCACAACGGAGACGCTCACCATATACT
GCGAGAATCTTCTGAAGGATGGGAAGTACATCTTCCAGTGTCCCCACATC
AGCGAAACAACCGGAGAGCATTGTGGGAAGGAGTGGCCCTATCCGGAGGT
CAGTGACCGCGCCGCTCTTCCTCAGGAAAAACGAAAAAGGTTCGAGAAAG
GTATCGCCAAAAACTATTTACGTATCGGGATGGGCATCCAGAGGTGTCCA
AAGTGTAGGTCCTACTGCGAGCGGTTAAGATGTTATCACAGGCGCAATGA
GCGCGTGCGCGTGGTGTGCCGCCTGTGTTCAACTGTGTTCTGCTGGTACT
GCCTGCAGGAGTGGGTCGCGAGTGGTACGGTCGTCTGCGGCAATAACGAC
TGTAGTGGCGAAGACAGGCGTCTGAGGTACCTCCGCAACTTCCAGCGAAG
GACCATCGTGGGAGTACCGGACTGTCCCGGCGTCAGGGCCTGCCCGAGGT
GCGGCATACTCATCACACACGACAGGGCATGCAAGCACATGACCTGCATC
TGTAGCCTGAAGTTCTGTTTCATCTGCCTGAAGCCTGCTGTCCATGGTGA
GTACCAGTGCGGCCCCTTCAACAGCCCGTGCGAGGTCGCCCACGTGCAGA
CAAGCATTCCCGGGGACCAACGAGAAACATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000357 | genome | Sc0000357:77072..79709 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96051_evm3 |
| Biotype | protein_coding |
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