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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96047_evm1 >transcript:BL96047_evm1-protein ID=transcript:BL96047_evm1-protein|Name=transcript:BL96047_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=350bp
MNFEFRSALSLLVLFLGEPFCHYVVGEVGGLLLYELACVVMYLLLPAGEV TIKDRVVLITGCDSGFGHALAQHLDSLGCVVFAGCLHGDGEGATSLASSC SAQLKILQLDVTDAQQVDQARQVVQEYLGPHRGLWGLVNNAGLVYFGELD LLPFSMVQRSIDVNLVGMLRMTKTFLPLLRKGKGRVINMSSIAGSVPLMF MCAEGAAKAGVEAASHILRQELKKWGVQVSIVQPFAFKTGWQSSESMLTN YNQIRQALDKDTLDTYGLDYLDAFKHNLLNEESLNEDLGQVIGVMTDALT SRGPRAWYPCGRGTRSLVWLSNLLPTSILDMILPLLMLQIDVTPTGLRER Run BLAST on NCBI mRNA from alignment at Sc0000346:25723..29520- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96047_evm1 ID=transcript:BL96047_evm1|Name=transcript:BL96047_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3798bp|location=Sequence derived from alignment at Sc0000346:25723..29520- (Branchiostoma lanceolatum) ATGAATTTCGAGTTCCGTTCGGCGCTGAGTTTGCTGGTGCTGTTTCTCGG
CGAGCCGTTTTGTCACTATGTGGTTGGCGAGGTGGGAGGACTACTGCTGT
ACGAACTGGCCTGTGTAGTCATGTACCTGCTCCTACCTGCTGGGGAGGTG
ACGATTAAGGACAGGGTCGTGCTCATAACAGGTAACAGTACACCAAAGGG
GAGGGGCCGGGAGTGCCGTACATGTTCATGCATAAATTTTAGTCAGTCTG
TCGTTTATTTGGACAAGCATAGATAATGAAAGTTGTAACGCCTTAACAAA
ACCCTCACAGCTATGCCTATGCTCTGTTCATTCTACTTTGTAAACACAGC
AATACTCAAGTTTTTGTCCATTGTTGGTTGCTTGAGAGAAATGATAACTT
GCAAGTTGCTTGAGAGAAATGATAATTTATCCCAAACTATGCCTGCTATC
TCATCCAGGATGTGACAGTGGCTTTGGCCATGCCCTAGCCCAGCACCTGG
ACAGCCTGGGCTGTGTGGTGTTTGCTGGCTGTCTCCATGGTGACGGGGAG
GGAGCCACCAGCCTCGCAAGCAGCTGCTCTGCCCAGCTGAAAATTCTACA
GCTGGATGTGACAGATGCCCAGCAGGTGGATCAGGCCAGACAGGTGGTAC
AGGAGTACCTGGGACCTCACAGAGGTTGGTTATGGTGAAGTCCTATAATT
CAGAAATACTGAGTCTCTTTATCCTTTCTTCATCCTCTTCCGCAAATATT
TGCACAGGAGGACGAAGAGACTAGGTAGCTATGAAATATTCACCTTAAAT
ATTCACCTTGAAGTTCAGCCAGTAGATACCCTTTCGAGCAATGAGGCTGT
GCCTAGTTTGGTGCTAGTAGTGGGCATGGTAGTTTCTTATCTGCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCTTCCTTCCTTCCCTTAGTAGGAA
AGCTTGTGTTTGGATACCAGGCTAGTCAAGTTCCACAACCACTCTCCATC
AGTGGGTTGGCTAGGAGTGTAGTTTCACCCAGCTGTAAGAAGCTACTGTG
TTCTTGTCCTTGTTTTGTAGTTGGTTGCTCACAATGACCTTGTTAACCTG
TTACATACCTCTTGCCACATACATGTAGTACATGTGTTATCTTAAAGGTA
AAGTAAAGGCAGGCATCCTCAATTGAGGTGAAGCATGTGTTATCTTAAAA
TGGTTTTAATGTAATGCAATGTCTGTTTCAGGTTTGTGGGGTTTGGTGAA
CAATGCAGGCCTGGTGTACTTTGGTGAGCTTGACCTCCTCCCCTTCTCCA
TGGTTCAGCGCAGCATCGATGTGAACCTGGTCGGGATGTTACGGATGACC
AAGACTTTCCTCCCCCTACTGAGGAAAGGGAAGGGCAGGGTCATCAACAT
GTCCAGTATCGCAGGTGCAACATTTTGAGTACTGGTAGTATGTATATCAT
GACATGACGGTAAAAATCATAACAGTGTAATTCAACACAGTACAGCATAG
TTCAATATGGTACAGTATTGGCTGGCATGATATATAAAGTAATTTGGTTT
TTTGGTGTAAATGATATTCCGGTACAGAGGCCTGTCCTCTGCGATTGTAG
AGCTTGTAGTGATTGAGGTTATTTTGCGTACTGCTTGTCTGCAGGAAGTG
TTCCGCTGATGTTTATGTGTGCAGAAGGAGCAGCTAAGGCCGGGGTGGAG
GCAGCATCCCACATCCTGCGACAGGAGCTGAAGAAATGGGGAGTGCAGGT
GTCCATCGTGCAGCCGTTTGCCTTTAAGACAGGTGGGAGTTTGAACTATG
CTACTGGTAGGGCTGTGTTTTTCTCGTTCAGCCAAATCTCCATGTCTTAT
CTGTGATCTCCACATAGTAAAGTGTCTTGAAGAGTGGCATATTTTCTAAG
CCAAGCCTCCCTCCATGTGTACAGCACGGCTGCCAGGTCAGACTGAGCTG
TGACCGTTTAAGCCTAGGTTACACATAGCCGAACATGGCTCCCGAACGCT
AGCCGACTCAGGTCGGCGGTAGTTCGGGAGCATTCTGACCAGTTTTTGGG
CCACGCCTATCTTTGGCGCCGAACATGCGCCGAGGATGCGCCGATCATCT
CCTAACCAGTACACGAATTACTCCCGAATGGGCCCCGAATGCTTTCTAGC
TTACTCCCAACCATCCCGACCTCTAGCCGCAGACTGCCGAATCTCTCCTG
ACTAAACCCCGACCGATTGCAGACCCTCTCACGAATTTAAATGGACATAT
TCAGCGACTTTCAAAAGAGGGGTCATTTTCGGTTTTAATTAAAATAATCC
ATTCTATTATGTTGTTAACATCACCGAGAGATCGAATTCGGATCATGGCT
AGCTTTAATACTGCTTTTAGTGTTCTTCTTTGTTTTTGGTCGTGTGAAGG
TCGGGGGTGATTCGCCCACGTTCCGATAGTAGTCACTTGGTTGAGAATTA
GTTAGCAGAGTTTTGTCTACGGCCTTGGGGTGAGTTATGGGTAGGTTGGA
AACTAGTTGGGAGTAAGTCAGTAGTGTTTCTGGCGTGGTTAAGGTTCTAA
TTTTACTACTGACTCAATCCCGAATACCAGCCGAGCACTAGCCGACCGCG
CCGAACACGAGCCGAACACCAGCAGACCCATTTCAGACCCTCCGTCCAGA
GCCGAATGTTTTGAAATTTTCAAAACATTCGGCTGGCGCAGCCGAACACC
AGCCGACTCAGCCGAACGCCAGCCGACTCGGCCGAACGCCAACCGAGCTA
GCTCCCAAATCACTCCCGAATCACTCCAACCATGGTCGGGGGAGAGTCGG
GAGGCCATGTTCGGCTGTGTGTAACCTAGGCTTTACGGTAGCTCCATTTA
TTGGGTGTTTTTATAGTGCAACCATGGTCTTTAAGAGGGGCTACATGGTA
AGCCATAGGTCCATATCTTTCTGTCCTGGTTCTCTAAAACAACACTGGAT
GGATTATTAACTGATGTGTTATTCTAATTTCTAGGATGGCAAAGTTCAGA
GTCCATGCTCACGAACTATAACCAAATCAGACAGGCGCTGGACAAGGACA
CGTTGGACACCTATGGTCTGGACTACCTGGATGCTTTCAAACATAACTTA
CTGAATGAAGAGTCTCTAAACGAGGACCTTGGCCAAGTTATAGGTATGTT
TCAGACTAGACAGCACTATGACAGCATTGTTAAAAGTGTAGATATTCATC
ACAGCTGAGCAACAGTGTTCAGAAGACATATTATTTACAATGTTTACATG
TGATACTTAAACTGTTTGTCTCAGGTGTGTAAAGATACATGTAGCAATGT
TCTGACTACTGGGGTTTTGCAAATTGCTCTTGATCATACAATGAAGTATG
TTTGATATTTGAAACCCAGGCTTTTGTAGTTTGTAATTCATAGCCTTGAA
TATAAAACCCTATTTTTTGTTTCCACATGTCCTTGAATTGTAAATGTACA
GATATTGTGTACTTCCCCGCAGGAGTGATGACAGATGCACTGACATCCAG
AGGTCCCAGGGCCTGGTACCCGTGTGGGCGTGGCACCAGGTCGCTTGTCT
GGTTATCCAACCTTCTACCAACCAGCATTCTGGACATGATATTACCACTG
CTGATGCTCCAGATAGATGTCACACCAACAGGGCTCAGAGAGAGATAA Coding sequence (CDS) from alignment at Sc0000346:25723..29520- >transcript:BL96047_evm1 ID=transcript:BL96047_evm1|Name=transcript:BL96047_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=6318bp|location=Sequence derived from alignment at Sc0000346:25723..29520- (Branchiostoma lanceolatum) ATGAATTTCGAGTTCCGTTCGGCGCTGAGTTTGCTGGTGCTGTTTCTCGG CGAGCCGTTTTGTCACTATGTGGTTGGCGAGGTGGGAGGACTACTGCTGT ACGAACTGGCCTGTGTAGTCATGTACCTGCTCCTACCTGCTGGGGAGGTG ACGATTAAGGACAGGGTCGTGCTCATAACAGGATGTGACAGTGGCTTTGG CCATGCCCTAGCCCAGCACCTGGACAGCCTGGGCTGTGTGGTGTTTGCTG GCTGTCTCCATGGTGACGGGGAGGGAGCCACCAGCCTCGCAAGCAGCTGC TCTGCCCAGCTGAAAATTCTACAGCTGGATGTGACAGATGCCCAGCAGGT GGATCAGGCCAGACAGGTGGTACAGGAGTACCTGGGACCTCACAGAGGTT TGTGGGGTTTGGTGAACAATGCAGGCCTGGTGTACTTTGGTGAGCTTGAC CTCCTCCCCTTCTCCATGGTTCAGCGCAGCATCGATGTGAACCTGGTCGG GATGTTACGGATGACCAAGACTTTCCTCCCCCTACTGAGGAAAGGGAAGG GCAGGGTCATCAACATGTCCAGTATCGCAGGAAGTGTTCCGCTGATGTTT ATGTGTGCAGAAGGAGCAGCTAAGGCCGGGGTGGAGGCAGCATCCCACAT CCTGCGACAGGAGCTGAAGAAATGGGGAGTGCAGGTGTCCATCGTGCAGC CGTTTGCCTTTAAGACAGGATGGCAAAGTTCAGAGTCCATGCTCACGAAC TATAACCAAATCAGACAGGCGCTGGACAAGGACACGTTGGACACCTATGG TCTGGACTACCTGGATGCTTTCAAACATAACTTACTGAATGAAGAGTCTC TAAACGAGGACCTTGGCCAAGTTATAGGAGTGATGACAGATGCACTGACA TCCAGAGGTCCCAGGGCCTGGTACCCGTGTGGGCGTGGCACCAGGTCGCT TGTCTGGTTATCCAACCTTCTACCAACCAGCATTCTGGACATGATATTAC CACTGCTGATGCTCCAGATAGATGTCACACCAACAGGGCTCAGAGAGAGA TAAATGAATTTCGAGTTCCGTTCGGCGCTGAGTTTGCTGGTGCTGTTTCT CGGCGAGCCGTTTTGTCACTATGTGGTTGGCGAGGTGGGAGGACTACTGC TGTACGAACTGGCCTGTGTAGTCATGTACCTGCTCCTACCTGCTGGGGAG GTGACGATTAAGGACAGGGTCGTGCTCATAACAGGATGTGACAGTGGCTT TGGCCATGCCCTAGCCCAGCACCTGGACAGCCTGGGCTGTGTGGTGTTTG CTGGCTGTCTCCATGGTGACGGGGAGGGAGCCACCAGCCTCGCAAGCAGC TGCTCTGCCCAGCTGAAAATTCTACAGCTGGATGTGACAGATGCCCAGCA GGTGGATCAGGCCAGACAGGTGGTACAGGAGTACCTGGGACCTCACAGAG GTTTGTGGGGTTTGGTGAACAATGCAGGCCTGGTGTACTTTGGTGAGCTT GACCTCCTCCCCTTCTCCATGGTTCAGCGCAGCATCGATGTGAACCTGGT CGGGATGTTACGGATGACCAAGACTTTCCTCCCCCTACTGAGGAAAGGGA AGGGCAGGGTCATCAACATGTCCAGTATCGCAGGAAGTGTTCCGCTGATG TTTATGTGTGCAGAAGGAGCAGCTAAGGCCGGGGTGGAGGCAGCATCCCA CATCCTGCGACAGGAGCTGAAGAAATGGGGAGTGCAGGTGTCCATCGTGC AGCCGTTTGCCTTTAAGACAGGATGGCAAAGTTCAGAGTCCATGCTCACG AACTATAACCAAATCAGACAGGCGCTGGACAAGGACACGTTGGACACCTA TGGTCTGGACTACCTGGATGCTTTCAAACATAACTTACTGAATGAAGAGT CTCTAAACGAGGACCTTGGCCAAGTTATAGGAGTGATGACAGATGCACTG ACATCCAGAGGTCCCAGGGCCTGGTACCCGTGTGGGCGTGGCACCAGGTC GCTTGTCTGGTTATCCAACCTTCTACCAACCAGCATTCTGGACATGATAT TACCACTGCTGATGCTCCAGATAGATGTCACACCAACAGGGCTCAGAGAG AGATAAATGAATTTCGAGTTCCGTTCGGCGCTGAGTTTGCTGGTGCTGTT TCTCGGCGAGCCGTTTTGTCACTATGTGGTTGGCGAGGTGGGAGGACTAC TGCTGTACGAACTGGCCTGTGTAGTCATGTACCTGCTCCTACCTGCTGGG GAGGTGACGATTAAGGACAGGGTCGTGCTCATAACAGGATGTGACAGTGG CTTTGGCCATGCCCTAGCCCAGCACCTGGACAGCCTGGGCTGTGTGGTGT TTGCTGGCTGTCTCCATGGTGACGGGGAGGGAGCCACCAGCCTCGCAAGC AGCTGCTCTGCCCAGCTGAAAATTCTACAGCTGGATGTGACAGATGCCCA GCAGGTGGATCAGGCCAGACAGGTGGTACAGGAGTACCTGGGACCTCACA GAGGTTTGTGGGGTTTGGTGAACAATGCAGGCCTGGTGTACTTTGGTGAG CTTGACCTCCTCCCCTTCTCCATGGTTCAGCGCAGCATCGATGTGAACCT GGTCGGGATGTTACGGATGACCAAGACTTTCCTCCCCCTACTGAGGAAAG GGAAGGGCAGGGTCATCAACATGTCCAGTATCGCAGGAAGTGTTCCGCTG ATGTTTATGTGTGCAGAAGGAGCAGCTAAGGCCGGGGTGGAGGCAGCATC CCACATCCTGCGACAGGAGCTGAAGAAATGGGGAGTGCAGGTGTCCATCG TGCAGCCGTTTGCCTTTAAGACAGGATGGCAAAGTTCAGAGTCCATGCTC ACGAACTATAACCAAATCAGACAGGCGCTGGACAAGGACACGTTGGACAC CTATGGTCTGGACTACCTGGATGCTTTCAAACATAACTTACTGAATGAAG AGTCTCTAAACGAGGACCTTGGCCAAGTTATAGGAGTGATGACAGATGCA CTGACATCCAGAGGTCCCAGGGCCTGGTACCCGTGTGGGCGTGGCACCAG GTCGCTTGTCTGGTTATCCAACCTTCTACCAACCAGCATTCTGGACATGA TATTACCACTGCTGATGCTCCAGATAGATGTCACACCAACAGGGCTCAGA GAGAGATAAATGAATTTCGAGTTCCGTTCGGCGCTGAGTTTGCTGGTGCT GTTTCTCGGCGAGCCGTTTTGTCACTATGTGGTTGGCGAGGTGGGAGGAC TACTGCTGTACGAACTGGCCTGTGTAGTCATGTACCTGCTCCTACCTGCT GGGGAGGTGACGATTAAGGACAGGGTCGTGCTCATAACAGGATGTGACAG TGGCTTTGGCCATGCCCTAGCCCAGCACCTGGACAGCCTGGGCTGTGTGG TGTTTGCTGGCTGTCTCCATGGTGACGGGGAGGGAGCCACCAGCCTCGCA AGCAGCTGCTCTGCCCAGCTGAAAATTCTACAGCTGGATGTGACAGATGC CCAGCAGGTGGATCAGGCCAGACAGGTGGTACAGGAGTACCTGGGACCTC ACAGAGGTTTGTGGGGTTTGGTGAACAATGCAGGCCTGGTGTACTTTGGT GAGCTTGACCTCCTCCCCTTCTCCATGGTTCAGCGCAGCATCGATGTGAA CCTGGTCGGGATGTTACGGATGACCAAGACTTTCCTCCCCCTACTGAGGA AAGGGAAGGGCAGGGTCATCAACATGTCCAGTATCGCAGGAAGTGTTCCG CTGATGTTTATGTGTGCAGAAGGAGCAGCTAAGGCCGGGGTGGAGGCAGC ATCCCACATCCTGCGACAGGAGCTGAAGAAATGGGGAGTGCAGGTGTCCA TCGTGCAGCCGTTTGCCTTTAAGACAGGATGGCAAAGTTCAGAGTCCATG CTCACGAACTATAACCAAATCAGACAGGCGCTGGACAAGGACACGTTGGA CACCTATGGTCTGGACTACCTGGATGCTTTCAAACATAACTTACTGAATG AAGAGTCTCTAAACGAGGACCTTGGCCAAGTTATAGGAGTGATGACAGAT GCACTGACATCCAGAGGTCCCAGGGCCTGGTACCCGTGTGGGCGTGGCAC CAGGTCGCTTGTCTGGTTATCCAACCTTCTACCAACCAGCATTCTGGACA TGATATTACCACTGCTGATGCTCCAGATAGATGTCACACCAACAGGGCTC AGAGAGAGATAAATGAATTTCGAGTTCCGTTCGGCGCTGAGTTTGCTGGT GCTGTTTCTCGGCGAGCCGTTTTGTCACTATGTGGTTGGCGAGGTGGGAG GACTACTGCTGTACGAACTGGCCTGTGTAGTCATGTACCTGCTCCTACCT GCTGGGGAGGTGACGATTAAGGACAGGGTCGTGCTCATAACAGGATGTGA CAGTGGCTTTGGCCATGCCCTAGCCCAGCACCTGGACAGCCTGGGCTGTG TGGTGTTTGCTGGCTGTCTCCATGGTGACGGGGAGGGAGCCACCAGCCTC GCAAGCAGCTGCTCTGCCCAGCTGAAAATTCTACAGCTGGATGTGACAGA TGCCCAGCAGGTGGATCAGGCCAGACAGGTGGTACAGGAGTACCTGGGAC CTCACAGAGGTTTGTGGGGTTTGGTGAACAATGCAGGCCTGGTGTACTTT GGTGAGCTTGACCTCCTCCCCTTCTCCATGGTTCAGCGCAGCATCGATGT GAACCTGGTCGGGATGTTACGGATGACCAAGACTTTCCTCCCCCTACTGA GGAAAGGGAAGGGCAGGGTCATCAACATGTCCAGTATCGCAGGAAGTGTT CCGCTGATGTTTATGTGTGCAGAAGGAGCAGCTAAGGCCGGGGTGGAGGC AGCATCCCACATCCTGCGACAGGAGCTGAAGAAATGGGGAGTGCAGGTGT CCATCGTGCAGCCGTTTGCCTTTAAGACAGGATGGCAAAGTTCAGAGTCC ATGCTCACGAACTATAACCAAATCAGACAGGCGCTGGACAAGGACACGTT GGACACCTATGGTCTGGACTACCTGGATGCTTTCAAACATAACTTACTGA ATGAAGAGTCTCTAAACGAGGACCTTGGCCAAGTTATAGGAGTGATGACA GATGCACTGACATCCAGAGGTCCCAGGGCCTGGTACCCGTGTGGGCGTGG CACCAGGTCGCTTGTCTGGTTATCCAACCTTCTACCAACCAGCATTCTGG ACATGATATTACCACTGCTGATGCTCCAGATAGATGTCACACCAACAGGG CTCAGAGAGAGATAAATGAATTTCGAGTTCCGTTCGGCGCTGAGTTTGCT GGTGCTGTTTCTCGGCGAGCCGTTTTGTCACTATGTGGTTGGCGAGGTGG GAGGACTACTGCTGTACGAACTGGCCTGTGTAGTCATGTACCTGCTCCTA CCTGCTGGGGAGGTGACGATTAAGGACAGGGTCGTGCTCATAACAGGATG TGACAGTGGCTTTGGCCATGCCCTAGCCCAGCACCTGGACAGCCTGGGCT GTGTGGTGTTTGCTGGCTGTCTCCATGGTGACGGGGAGGGAGCCACCAGC CTCGCAAGCAGCTGCTCTGCCCAGCTGAAAATTCTACAGCTGGATGTGAC AGATGCCCAGCAGGTGGATCAGGCCAGACAGGTGGTACAGGAGTACCTGG GACCTCACAGAGGTTTGTGGGGTTTGGTGAACAATGCAGGCCTGGTGTAC TTTGGTGAGCTTGACCTCCTCCCCTTCTCCATGGTTCAGCGCAGCATCGA TGTGAACCTGGTCGGGATGTTACGGATGACCAAGACTTTCCTCCCCCTAC TGAGGAAAGGGAAGGGCAGGGTCATCAACATGTCCAGTATCGCAGGAAGT GTTCCGCTGATGTTTATGTGTGCAGAAGGAGCAGCTAAGGCCGGGGTGGA GGCAGCATCCCACATCCTGCGACAGGAGCTGAAGAAATGGGGAGTGCAGG TGTCCATCGTGCAGCCGTTTGCCTTTAAGACAGGATGGCAAAGTTCAGAG TCCATGCTCACGAACTATAACCAAATCAGACAGGCGCTGGACAAGGACAC GTTGGACACCTATGGTCTGGACTACCTGGATGCTTTCAAACATAACTTAC TGAATGAAGAGTCTCTAAACGAGGACCTTGGCCAAGTTATAGGAGTGATG ACAGATGCACTGACATCCAGAGGTCCCAGGGCCTGGTACCCGTGTGGGCG TGGCACCAGGTCGCTTGTCTGGTTATCCAACCTTCTACCAACCAGCATTC TGGACATGATATTACCACTGCTGATGCTCCAGATAGATGTCACACCAACA GGGCTCAGAGAGAGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000346 | genome | Sc0000346:25723..29520 - |
Properties
Property Name | Value |
Transcript id | BL96047_evm1 |
Biotype | protein_coding |
|