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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96040_evm2 >transcript:BL96040_evm2-protein ID=transcript:BL96040_evm2-protein|Name=transcript:BL96040_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=112bp
MKVAVVLVCLAVLVAIVHCAPVDNAEASAPNKHELARKTVHELESLEKKA
SENHKLLRDVGFREEAGHALSMAKKGASHLKHSQLKKAGERLAHDFGKKR
AKQLLSKLKGKK Run BLAST on NCBI mRNA from alignment at Sc0000332:240463..242871+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96040_evm2 ID=transcript:BL96040_evm2|Name=transcript:BL96040_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2409bp|location=Sequence derived from alignment at Sc0000332:240463..242871+ (Branchiostoma lanceolatum)
ATGAAGGTTGCTGTCGTTCTGGTGTGCCTGGCTGTTCTGGTGGCCATCGT
ACACTGCGCTCCCGTGGACAGTAAGTATTTCCTACCTCATCCCAAAAAAA
GACGAAAACGCAATTTCCCATAAGCAATGCTGTGTTCCATTGATGTAAGT
CTTACCCCCGTACTTATCGGATAAAAGGATTCTGGACAGAAAAGTCTACC
TAGACTAGGTATGTATGATATGTCAACAACATTAAATGTGAATTTGAAAA
AAAATGGTTGCTTTCAAATACCTCTGTTTTTCTTTACAGATGCAGAAGCC
AGCGCTCCTAACAAACACGGTCAGTAGACTTTATAAACGGAAATCTGGCT
TATCAATTTAGTCATTGTAGTCGCCCCTCTGCTATCTTATTGTTCAGTTA
CCCCAGTATTTGTCACGTGCCTTGCCCTTGTGTCTTGTGAAAGTACAGTC
AAACCTCCAGTCGTAAGGCACATTTTATGCAGAAATGTTCTCTGTGGTTT
TATGTTCGCGGTTTTTTTATGTTCGCGGTGAACCTTTAACCATCGCGAAC
ATTTTGTCCAATACTGTAGCAGTATGTGACTATAGCACTGCCGTGAAATT
AAAACCACCACGAACACTTAATTTTCCCCTTAGCGCGAAATAAAAACCAC
GCGAACTCAAATGCATTTACAGTAACAGTCCCGTCCAAATTGACATCGTT
GTCTTGACCAACGGGCCCTAGTAACTAACCATATTCCCCAGTCCCTTGAG
TTGAACTGTAATACCGATTCTCGATCAAAGACACATCGGTTATTATCCTA
CCAATAAAAACGGCATTGAAAGCAAATTTCTAACTAAGCTTGCCTTTTTC
TTCTGTCGTCCACAGAGCTCGCTCGGAAGACCGTGCATGAGTTGGAATCC
CTTGAAAAGAAAGCAAGCGAAAACCATAAACTGCTTCGTGGTAAGTCAGC
ATATCATTTACCAATCTAGCCATGCCTTGTCTAATTCATGGTATCGATAC
GCGATTGCTTTATTTTCTTGTCATCAGAATTCTCAGATCTGGTCAAATTG
GATGGATGGATAAGGAAGCATGTTTCTAGAATGTCAAATTTTGACTTTGT
TTTTTTTATTCTGTGCTACAGATGTTGGCTTTCGTGAGGAGGCTGGACAT
GCTCTGAGTATGGCCAAGAAAGGAGCCAGTCATCTGAAACACAGCCAGCT
CAAGAAAGGTACGTTCTACACAACCACCTGAGTAGGAAGCGTTTTAAGTC
TCCCTCACGCGAGGCTTGCATGGGGATTTTCAAGTAGATGACATTGTGAC
ATGCAGCGCCCGGGGCGTTGCCAAAATAAGATTACATCTTCCACCCAGAT
TTGACTGAACGTCTCAGACTAGCGTGTCTGGGTGACATGTCCCATTTTTT
TCTTGACAGTTGGTAAAGAACAGCGCACTCTTTTGTTTTGTGGCCCCCAT
ATGTCCCAGTTCTTTTCTGCTAAAAGAGGGCAATGGGCTTCGCTCCATGG
CATGGAAACCTAGTACATAGTCGTTCAACCTGTTCTGATGTTATTCTAAA
ACAGTTGTGGAGAGTCCAGGTACAGATCCAGTGATTGCATTTAATCAAAA
GACTACAGAGACACCATAATACCGTCTGTGCAAAAGGTTTCATTCACTTC
TCGGCTTCGTGGTTAGTTAATGATCTTCTCACACGAATGACACTTTATAC
GTGAAAGAGTTGGTCGTGGACCGGGTGACCGGAAAGGAAAGGAAGGAAGG
AAGGAATGAATGAATGAATGAATGAATGAATGAATGAAGACCTTCATTGC
ACACACATACCCAACAGGGTTTAGTACAGGTCACAACAGAAAACATCACA
GTTTGCAAATACACACATATATACATACAAATATAAGCTTGCACTAGTCT
AATGATTACGTTAATTTGGCCTCTTCTCGCTTCTTAGTAATATTGTAAAT
ATTGGTACAAGTATGTTTGATGATTAATGGTTTATCTAAAGCCATTAGAA
ATATGAATTTTTCCGCGTTTCCAAGATGTATGAAATGGGGAAACCTACAC
TGAACTAGTTTGTAAAAAGCAGCTCTCTCTTCGTTGTATAAACTACATTC
CACTAAAAACTGTTGCTCGTCCTCTATCCTATCTAAATTGCAATGTCTAC
ATGTTCGTTGTTCCGGGGATGTGCGGTTATGACGTCCGGTTTCAATGTGA
ATAAACATGCTCTACAGTGAATATTTACTACCAGTAAACATCTAGACCTG
GAACAATATGAGAGTGTTCTGAACTGTGGGTGTAAGTGTAACGTTACCAT
TCAAATCGTTAAACGTTTCCTTTACGTTAAAGCGGGGGAAAGACTGGCCC
ATGACTTCGGGAAAAAACGAGCCAAGCAGTTGCTGTCCAAGCTGAAGGGC
AAGAAATAG Coding sequence (CDS) from alignment at Sc0000332:240463..242871+ >transcript:BL96040_evm2 ID=transcript:BL96040_evm2|Name=transcript:BL96040_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=1695bp|location=Sequence derived from alignment at Sc0000332:240463..242871+ (Branchiostoma lanceolatum)
ATGAAGGTTGCTGTCGTTCTGGTGTGCCTGGCTGTTCTGGTGGCCATCGT
ACACTGCGCTCCCGTGGACAATGCAGAAGCCAGCGCTCCTAACAAACACG
AGCTCGCTCGGAAGACCGTGCATGAGTTGGAATCCCTTGAAAAGAAAGCA
AGCGAAAACCATAAACTGCTTCGTGATGTTGGCTTTCGTGAGGAGGCTGG
ACATGCTCTGAGTATGGCCAAGAAAGGAGCCAGTCATCTGAAACACAGCC
AGCTCAAGAAAGCGGGGGAAAGACTGGCCCATGACTTCGGGAAAAAACGA
GCCAAGCAGTTGCTGTCCAAGCTGAAGGGCAAGAAATAGATGAAGGTTGC
TGTCGTTCTGGTGTGCCTGGCTGTTCTGGTGGCCATCGTACACTGCGCTC
CCGTGGACAATGCAGAAGCCAGCGCTCCTAACAAACACGAGCTCGCTCGG
AAGACCGTGCATGAGTTGGAATCCCTTGAAAAGAAAGCAAGCGAAAACCA
TAAACTGCTTCGTGATGTTGGCTTTCGTGAGGAGGCTGGACATGCTCTGA
GTATGGCCAAGAAAGGAGCCAGTCATCTGAAACACAGCCAGCTCAAGAAA
GCGGGGGAAAGACTGGCCCATGACTTCGGGAAAAAACGAGCCAAGCAGTT
GCTGTCCAAGCTGAAGGGCAAGAAATAGATGAAGGTTGCTGTCGTTCTGG
TGTGCCTGGCTGTTCTGGTGGCCATCGTACACTGCGCTCCCGTGGACAAT
GCAGAAGCCAGCGCTCCTAACAAACACGAGCTCGCTCGGAAGACCGTGCA
TGAGTTGGAATCCCTTGAAAAGAAAGCAAGCGAAAACCATAAACTGCTTC
GTGATGTTGGCTTTCGTGAGGAGGCTGGACATGCTCTGAGTATGGCCAAG
AAAGGAGCCAGTCATCTGAAACACAGCCAGCTCAAGAAAGCGGGGGAAAG
ACTGGCCCATGACTTCGGGAAAAAACGAGCCAAGCAGTTGCTGTCCAAGC
TGAAGGGCAAGAAATAGATGAAGGTTGCTGTCGTTCTGGTGTGCCTGGCT
GTTCTGGTGGCCATCGTACACTGCGCTCCCGTGGACAATGCAGAAGCCAG
CGCTCCTAACAAACACGAGCTCGCTCGGAAGACCGTGCATGAGTTGGAAT
CCCTTGAAAAGAAAGCAAGCGAAAACCATAAACTGCTTCGTGATGTTGGC
TTTCGTGAGGAGGCTGGACATGCTCTGAGTATGGCCAAGAAAGGAGCCAG
TCATCTGAAACACAGCCAGCTCAAGAAAGCGGGGGAAAGACTGGCCCATG
ACTTCGGGAAAAAACGAGCCAAGCAGTTGCTGTCCAAGCTGAAGGGCAAG
AAATAGATGAAGGTTGCTGTCGTTCTGGTGTGCCTGGCTGTTCTGGTGGC
CATCGTACACTGCGCTCCCGTGGACAATGCAGAAGCCAGCGCTCCTAACA
AACACGAGCTCGCTCGGAAGACCGTGCATGAGTTGGAATCCCTTGAAAAG
AAAGCAAGCGAAAACCATAAACTGCTTCGTGATGTTGGCTTTCGTGAGGA
GGCTGGACATGCTCTGAGTATGGCCAAGAAAGGAGCCAGTCATCTGAAAC
ACAGCCAGCTCAAGAAAGCGGGGGAAAGACTGGCCCATGACTTCGGGAAA
AAACGAGCCAAGCAGTTGCTGTCCAAGCTGAAGGGCAAGAAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000332 | genome | Sc0000332:240463..242871 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96040_evm2 |
| Biotype | protein_coding |
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