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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96024_evm1 >transcript:BL96024_evm1-protein ID=transcript:BL96024_evm1-protein|Name=transcript:BL96024_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=213bp
MSKEQRVLQYVQQNASRGDPGSVLAAVDKFGWETEWAMNVGDVKGQILDR
FVKETAPQTMLELGTYMGYSAIRTVRLLPETAKFMTVEFNEKYAAVAREM
IEFAGLQNRIIQISSDTADVIPQLKTKHDVETLDMVFIDHRKKFYVRDIK
LLETNKLLRKGTVVVADNIIYPGAPEYADYVRTCGKYDSTFHESLLEYSK
DDIDGLEKSVFRG Run BLAST on NCBI mRNA from alignment at Sc0000308:94176..96224- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96024_evm1 ID=transcript:BL96024_evm1|Name=transcript:BL96024_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2049bp|location=Sequence derived from alignment at Sc0000308:94176..96224- (Branchiostoma lanceolatum)
ATGAGTAAAGAACAGCGCGTCCTGCAGTATGTACAACAGAACGCGTCACG
TGGGGACCCGGGCAGCGTCCTGGCAGCAGTGGACAAGTTCGGTTGGGAGA
CGGAGTGGGCCATGAATGTTGGGGATGTCAAAGGTAAAATATCATCGCTT
GATATGTAATGTACGTGTGTGGTAAGTGCTATTGTCCAAAGAGCAGTTGT
GGGGCGGGGTAGAAAAGGCAAGACAGCCTGGTATGACTACACTTGTAGAT
CGGCCTGTGAAAAGTTGGGAGGAGTCATTGTGTCCAGGGGGAAATCTTGA
TGCAATGGTTATCAGAAATTGTTCATTTTTCAATGCATTCTAAGAAGATT
TTGTGAATTTTGAGAAAATATATTTTTCGAAACAAGAGTAAGAAAAAGAT
TCATAAAAAAGATCCCCCCACTACAAAATGGAACGGTTGTGTTATGGCGT
CATGAAGTGGTGTGTTATGACAAGGGTGTGTTATGGCGTCATAACACATG
GGCAATGGAACTTCTGATTTGCCGACGCTATCTGGTTATGTGATAATCAT
CTTTACTATATGAATATCACACCTACAGGACAGATCCTGGACCGGTTCGT
GAAGGAGACGGCGCCCCAGACCATGCTGGAGCTGGGCACGTACATGGGCT
ACTCCGCCATCAGGACCGTCAGGCTGCTGCCGGAAACAGCCAAGTTCATG
ACCGTGGAGTTCAATGAAAAGTACGCCGCGGTTGCCAGGGAGATGATCGA
ATTTGCAGGGCTGCAGAACAGGGTAATTTGGTTCTCATTTCTACTAGAGA
CTGCGCCCGCTGAGCGAATTCGAACAAAAAAAGGTATCTAGCTCAACGAT
TTCCATAGTTAAAGAACGATTCTTTACTTTGTGTTTTGTTGTCCTTCTAT
TCCAATTATGAAACCAAGGGTTACACAAGTCAAATTTTGGTTGCTGTACG
GTCGCTCAGTAAACCACCTTTAGCGTAACATAACAGTATTATACAGTAGG
TAGTAGGTATAGGCTGTGTGAGACCAGACTGTAATGCTTACACCGAGTTG
GACCCCTACTCATTTCTATAAGTAGGAGTGAGGAAATGGATGTAAAGGGA
CTTCCCCAAGCCGCACAACACTGGGGCCTGCAAGGGATTTGAACCCAGAA
ACTTTAGATTATAAGTCAATAACCCTAACCACATTTATTTTTTTATTTAC
ACAGGTACTAGGTAAAAATAAAATAATACATACCTATAACTAATCAAAAT
ACTTTGTGCTGGGGAAAGTGAAATGGCACCACGGCATCATTCAATGATAT
CTAAACACGTTGTCATTTCAGGAATTCTTCATTGACATATCATGAAATTT
GTCACAGATTATCCAGATCAGTTCTGACACCGCTGACGTCATCCCCCAGC
TGAAGACAAAGCATGACGTAGAAACGCTTGACATGGTGTTTATAGACCAC
CGGAAGAAATTTTACGTCAGGGATATTAAACTACTGGAGACAAACAAGCT
ACTACGCAAAGGTGCTCATGTCGATTGTATAAATTTGCTTTGTATATATG
TATTGTCTTTTTGTTCTGTTTTAGTGGTGGCATGAAGATACGTCTACAAC
TTGAATGTGTCGCCACCATGTGTTGTTGATAGATGTTGCCGTATAAAGAT
GGTATAAAATGCACGTTACCTATGAAAAGTGAAATAAAAATTACGTCTAG
CCCGATTCACTGACGCATTAAAAAGGTGGGAGTTTGCTGCACAATTACGA
CGAGCCTGTTTAATAGGTTCGTGAAAGGCTATTGTTTAGCTGTTATTCAC
TCTAGTACTACTTCCTTGAGCAGAACCTAAAACAAATATTTTACCTTGCA
ATTTTTCTGGAAATCAAACTTATGTATTATGTCCCCAGGTACTGTAGTAG
TAGCTGACAACATTATCTACCCTGGTGCCCCAGAGTACGCGGACTACGTG
CGGACATGCGGCAAGTATGACTCGACTTTCCACGAGAGTCTTCTTGAGTA
CAGCAAGGACGACATCGACGGGCTCGAGAAGTCTGTGTTCCGAGGCTAA Coding sequence (CDS) from alignment at Sc0000308:94176..96224- >transcript:BL96024_evm1 ID=transcript:BL96024_evm1|Name=transcript:BL96024_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2568bp|location=Sequence derived from alignment at Sc0000308:94176..96224- (Branchiostoma lanceolatum)
ATGAGTAAAGAACAGCGCGTCCTGCAGTATGTACAACAGAACGCGTCACG
TGGGGACCCGGGCAGCGTCCTGGCAGCAGTGGACAAGTTCGGTTGGGAGA
CGGAGTGGGCCATGAATGTTGGGGATGTCAAAGGACAGATCCTGGACCGG
TTCGTGAAGGAGACGGCGCCCCAGACCATGCTGGAGCTGGGCACGTACAT
GGGCTACTCCGCCATCAGGACCGTCAGGCTGCTGCCGGAAACAGCCAAGT
TCATGACCGTGGAGTTCAATGAAAAGTACGCCGCGGTTGCCAGGGAGATG
ATCGAATTTGCAGGGCTGCAGAACAGGATTATCCAGATCAGTTCTGACAC
CGCTGACGTCATCCCCCAGCTGAAGACAAAGCATGACGTAGAAACGCTTG
ACATGGTGTTTATAGACCACCGGAAGAAATTTTACGTCAGGGATATTAAA
CTACTGGAGACAAACAAGCTACTACGCAAAGGTACTGTAGTAGTAGCTGA
CAACATTATCTACCCTGGTGCCCCAGAGTACGCGGACTACGTGCGGACAT
GCGGCAAGTATGACTCGACTTTCCACGAGAGTCTTCTTGAGTACAGCAAG
GACGACATCGACGGGCTCGAGAAGTCTGTGTTCCGAGGCTAAATGAGTAA
AGAACAGCGCGTCCTGCAGTATGTACAACAGAACGCGTCACGTGGGGACC
CGGGCAGCGTCCTGGCAGCAGTGGACAAGTTCGGTTGGGAGACGGAGTGG
GCCATGAATGTTGGGGATGTCAAAGGACAGATCCTGGACCGGTTCGTGAA
GGAGACGGCGCCCCAGACCATGCTGGAGCTGGGCACGTACATGGGCTACT
CCGCCATCAGGACCGTCAGGCTGCTGCCGGAAACAGCCAAGTTCATGACC
GTGGAGTTCAATGAAAAGTACGCCGCGGTTGCCAGGGAGATGATCGAATT
TGCAGGGCTGCAGAACAGGATTATCCAGATCAGTTCTGACACCGCTGACG
TCATCCCCCAGCTGAAGACAAAGCATGACGTAGAAACGCTTGACATGGTG
TTTATAGACCACCGGAAGAAATTTTACGTCAGGGATATTAAACTACTGGA
GACAAACAAGCTACTACGCAAAGGTACTGTAGTAGTAGCTGACAACATTA
TCTACCCTGGTGCCCCAGAGTACGCGGACTACGTGCGGACATGCGGCAAG
TATGACTCGACTTTCCACGAGAGTCTTCTTGAGTACAGCAAGGACGACAT
CGACGGGCTCGAGAAGTCTGTGTTCCGAGGCTAAATGAGTAAAGAACAGC
GCGTCCTGCAGTATGTACAACAGAACGCGTCACGTGGGGACCCGGGCAGC
GTCCTGGCAGCAGTGGACAAGTTCGGTTGGGAGACGGAGTGGGCCATGAA
TGTTGGGGATGTCAAAGGACAGATCCTGGACCGGTTCGTGAAGGAGACGG
CGCCCCAGACCATGCTGGAGCTGGGCACGTACATGGGCTACTCCGCCATC
AGGACCGTCAGGCTGCTGCCGGAAACAGCCAAGTTCATGACCGTGGAGTT
CAATGAAAAGTACGCCGCGGTTGCCAGGGAGATGATCGAATTTGCAGGGC
TGCAGAACAGGATTATCCAGATCAGTTCTGACACCGCTGACGTCATCCCC
CAGCTGAAGACAAAGCATGACGTAGAAACGCTTGACATGGTGTTTATAGA
CCACCGGAAGAAATTTTACGTCAGGGATATTAAACTACTGGAGACAAACA
AGCTACTACGCAAAGGTACTGTAGTAGTAGCTGACAACATTATCTACCCT
GGTGCCCCAGAGTACGCGGACTACGTGCGGACATGCGGCAAGTATGACTC
GACTTTCCACGAGAGTCTTCTTGAGTACAGCAAGGACGACATCGACGGGC
TCGAGAAGTCTGTGTTCCGAGGCTAAATGAGTAAAGAACAGCGCGTCCTG
CAGTATGTACAACAGAACGCGTCACGTGGGGACCCGGGCAGCGTCCTGGC
AGCAGTGGACAAGTTCGGTTGGGAGACGGAGTGGGCCATGAATGTTGGGG
ATGTCAAAGGACAGATCCTGGACCGGTTCGTGAAGGAGACGGCGCCCCAG
ACCATGCTGGAGCTGGGCACGTACATGGGCTACTCCGCCATCAGGACCGT
CAGGCTGCTGCCGGAAACAGCCAAGTTCATGACCGTGGAGTTCAATGAAA
AGTACGCCGCGGTTGCCAGGGAGATGATCGAATTTGCAGGGCTGCAGAAC
AGGATTATCCAGATCAGTTCTGACACCGCTGACGTCATCCCCCAGCTGAA
GACAAAGCATGACGTAGAAACGCTTGACATGGTGTTTATAGACCACCGGA
AGAAATTTTACGTCAGGGATATTAAACTACTGGAGACAAACAAGCTACTA
CGCAAAGGTACTGTAGTAGTAGCTGACAACATTATCTACCCTGGTGCCCC
AGAGTACGCGGACTACGTGCGGACATGCGGCAAGTATGACTCGACTTTCC
ACGAGAGTCTTCTTGAGTACAGCAAGGACGACATCGACGGGCTCGAGAAG
TCTGTGTTCCGAGGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000308 | genome | Sc0000308:94176..96224 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96024_evm1 |
| Biotype | protein_coding |
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