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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96015_evm2 >transcript:BL96015_evm2-protein ID=transcript:BL96015_evm2-protein|Name=transcript:BL96015_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=276bp
MKLFVALLAVGLPALAAAHSWIVCTDYLENNGWYWDQAKCRGWPRGATFY
NLRFGTFGTHNNYTWRLDNHPEERALCKVSRNDDRRYTEETPMAAYYLGQ
EVVLTHPANNHVAESKCRGRTAMDWENLMFVVDGDQDPCCIDSDKLIQIM
DMGVSPYGRELSDEVLSTYPKPGFQNVPKFCENPEDAMGTYNFTVPIDMQ
PGRHIFVWKWIRDPTVNPFTTCWEADVFATKAERDAHYAATGRSTEDMWD
FYKVHNIVDGVIMDPVDPSINEIITG Run BLAST on NCBI mRNA from alignment at Sc0000298:55361..57863+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96015_evm2 ID=transcript:BL96015_evm2|Name=transcript:BL96015_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2503bp|location=Sequence derived from alignment at Sc0000298:55361..57863+ (Branchiostoma lanceolatum)
ATGAAGCTCTTCGTCGCGCTCTTGGCTGTGGGGCTGCCTGCCCTGGCCGC
CGCCCACTCATGGATCGTCTGTACGGACTACCTGGAGAACAACGGCTGGT
ACTGGGACCAGGCCAAGTGCAGGGGATGGCCGCGGGGTGCCACATTGTGA
GATCTACATGTGTTTTACCATGATACGAAATATGTAATCATGCTACAGGT
AGAACTATGTATGTTGCCCTTGTTCCTTGATATTTCAAAACTCTGAATGG
AAAATTGCTGTCGCCTGGTGCCTTTTGGATTAGGGCTCAAGTAAGTAGCC
ACATCCATCGTAAATGTATGAAGTATTCGCCTGAAATTATTAGTCTTGTT
TTCACCATATCCAGGTGGTGGTTTATGAGGTATTTCCAGGCGCGCAAATT
GTTATGCGCTCAGAAAATAGAGTTATATAACAATCAAGTCTGTCCACGTA
TTTTAACGTTTTTCATCAGTTACAACCTTCGGTTTGGAACATTCGGGACG
CATAACAACTACACATGGCGCCTGGACAACCACCCAGAGGAGCGGGCTCT
GTGTAAAGTGTCCCGAAACGACGACCGCCGATACACCGAGGAAACCCCGA
TGGCTGCCTACTACCTGGGCCAGGAGGTAGTTTTGACTCACCCAGCAAAC
GTAAGACATTTTTTCTCGATAAAGACTATTTCCATGTAACTGCAGTCTGT
ATAACGCAAACTCCAGCTGTCCGGGACTTTTATGGCCGGTTCCCCCGCGT
TAGCGGCCGTAGCCATCAAGCTTCTAGGGGCTGACCGGTTACGGGCGGCT
GATATATGCGCGATTCAATCAGGCTAATGTAACTGTATGGTGTATATACA
CACGTACTGTTTGCTTTGCTGCTGTTTAGGTACGTGTCTACATTTTTCTC
GTCACTCTAGAACCACGTGGCGGAATCCAAGTGCAGAGGGAGGACCGCCA
TGGACTGGGAGAACCTGATGTTTGTGGTGGACGGAGACCAGGACCCCTGC
TGTATCGACTCGGACAAACTCATCCAGATCATGGACATGGGGGTGTCGCC
TTACGGTACGTCGTAGAGTCGTTCTCTGTTTCGCAATCATTTGTTTCACA
TGTGGTCTAATAGATACTTTAGGGTTGTTATTGGTTTAAACGGTCAATCT
GCAAGGCAGTCTACTGCTCTATTTTTCACCTTTTTTGTGGTACATACCGT
AATTTAGGCCGTGATCTTCCTGATGCCGAGGTGCTGTCCACCTACCCAAA
GCCGGGCTTCCAGAACGTGCATAAGTTTTGTCCCGCCACTGTAACAGATT
GTCAAATGGACAATTTAAGGTTGTTGTTGCTCAATACTGTCGATCTGCAA
GCTTAAGCCATTCAATAGCTATGTTTTTCACTTTTTTTGTGATACATACA
TGTAGGGCGTGAGCTTTCCGATGAGGTGCTGTCCACCTACCCGAAACCCG
GCTTCCAGAACGTGCCAAAGTTCTGTGAGAATCCTGAGGACGCCATGGGG
ACCTACAACTTCACCGTCCCGATAGACATGCAACCAGGTCATGTACACTC
GAAACGTTCCCTAATCTATTGGGATTGGGAATAGTCCTTAGATTTGCCTT
TTCTGTTCTCGCGTCTAACAAAGTCTGTGCTTTGCTGTGTGTTGTATCAT
TTGCCTTACTGGCTTTTTCAAGTTTTGTCCTCAGTGAATAAACAACTAGT
TCCCATGCATTTCTAATAGAACAAGTTTCCCCTTTAGGCCGCCATATCTT
CGTCTGGAAGTGGATACGCGATCCTACCGTCAACCCCTTCACCACCTGCT
GGGAGGCTGACGTGTTCGCCACCAAGGCGGAGAGAGACGCGCACTACGCG
GCAACGGTAATCTTTACCTTTCTTGATCTTTTCCTAATGGGCAGGATCCC
TTTCAGAATCAGAATAGAAGGCATATGGGGTGCAACCCTACTCGAAGAGT
ATTTCTCATTGCTGTAAAGGTTTTACACGTTATTTCCGTACACAATATAA
AGCACTCGCCAACAAGCTTCCGGCCCTCTGACCCTTCTCAAGTTGAAATG
AACCGAAGCCAGAGTAATCTCCAAGAAGATCTATAGGTGGCAAAGACCGT
ATCCAACTAGCAAAAGGAGTTTTCATAGCCACCCGTTAGCTATAGATCTG
CTTGGAGATTAAAGCCAGAGTGTTGCTTTGCGGTTTATCAAGTTTTCACT
ATAGATTGGTTACGGAATTCAGACGTCAGTGTACACTCCTATGTCACTGT
ACTTTGTGTACATGTACGGACTCATGGGTTCCGTCTCTTTCACGAGCACG
TCAGCGTAAGAATAACCAACTTAACTGCACACTGTGTGTTCTGATACCAT
CATAGACTGTAATTATTGAGCTAATGTTTGTTTCTTACCAAACAGGGTCG
TTCTACCGAGGACATGTGGGATTTCTACAAAGTCCACAACATCGTGGACG
GTGTGATCATGGACCCGGTGGACCCGTCCATCAACGAGATCATCACTGGA
TGA Coding sequence (CDS) from alignment at Sc0000298:55361..57863+ >transcript:BL96015_evm2 ID=transcript:BL96015_evm2|Name=transcript:BL96015_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=4986bp|location=Sequence derived from alignment at Sc0000298:55361..57863+ (Branchiostoma lanceolatum)
ATGAAGCTCTTCGTCGCGCTCTTGGCTGTGGGGCTGCCTGCCCTGGCCGC
CGCCCACTCATGGATCGTCTGTACGGACTACCTGGAGAACAACGGCTGGT
ACTGGGACCAGGCCAAGTGCAGGGGATGGCCGCGGGGTGCCACATTTTAC
AACCTTCGGTTTGGAACATTCGGGACGCATAACAACTACACATGGCGCCT
GGACAACCACCCAGAGGAGCGGGCTCTGTGTAAAGTGTCCCGAAACGACG
ACCGCCGATACACCGAGGAAACCCCGATGGCTGCCTACTACCTGGGCCAG
GAGGTAGTTTTGACTCACCCAGCAAACAACCACGTGGCGGAATCCAAGTG
CAGAGGGAGGACCGCCATGGACTGGGAGAACCTGATGTTTGTGGTGGACG
GAGACCAGGACCCCTGCTGTATCGACTCGGACAAACTCATCCAGATCATG
GACATGGGGGTGTCGCCTTACGGGCGTGAGCTTTCCGATGAGGTGCTGTC
CACCTACCCGAAACCCGGCTTCCAGAACGTGCCAAAGTTCTGTGAGAATC
CTGAGGACGCCATGGGGACCTACAACTTCACCGTCCCGATAGACATGCAA
CCAGGCCGCCATATCTTCGTCTGGAAGTGGATACGCGATCCTACCGTCAA
CCCCTTCACCACCTGCTGGGAGGCTGACGTGTTCGCCACCAAGGCGGAGA
GAGACGCGCACTACGCGGCAACGGGTCGTTCTACCGAGGACATGTGGGAT
TTCTACAAAGTCCACAACATCGTGGACGGTGTGATCATGGACCCGGTGGA
CCCGTCCATCAACGAGATCATCACTGGATGAATGAAGCTCTTCGTCGCGC
TCTTGGCTGTGGGGCTGCCTGCCCTGGCCGCCGCCCACTCATGGATCGTC
TGTACGGACTACCTGGAGAACAACGGCTGGTACTGGGACCAGGCCAAGTG
CAGGGGATGGCCGCGGGGTGCCACATTTTACAACCTTCGGTTTGGAACAT
TCGGGACGCATAACAACTACACATGGCGCCTGGACAACCACCCAGAGGAG
CGGGCTCTGTGTAAAGTGTCCCGAAACGACGACCGCCGATACACCGAGGA
AACCCCGATGGCTGCCTACTACCTGGGCCAGGAGGTAGTTTTGACTCACC
CAGCAAACAACCACGTGGCGGAATCCAAGTGCAGAGGGAGGACCGCCATG
GACTGGGAGAACCTGATGTTTGTGGTGGACGGAGACCAGGACCCCTGCTG
TATCGACTCGGACAAACTCATCCAGATCATGGACATGGGGGTGTCGCCTT
ACGGGCGTGAGCTTTCCGATGAGGTGCTGTCCACCTACCCGAAACCCGGC
TTCCAGAACGTGCCAAAGTTCTGTGAGAATCCTGAGGACGCCATGGGGAC
CTACAACTTCACCGTCCCGATAGACATGCAACCAGGCCGCCATATCTTCG
TCTGGAAGTGGATACGCGATCCTACCGTCAACCCCTTCACCACCTGCTGG
GAGGCTGACGTGTTCGCCACCAAGGCGGAGAGAGACGCGCACTACGCGGC
AACGGGTCGTTCTACCGAGGACATGTGGGATTTCTACAAAGTCCACAACA
TCGTGGACGGTGTGATCATGGACCCGGTGGACCCGTCCATCAACGAGATC
ATCACTGGATGAATGAAGCTCTTCGTCGCGCTCTTGGCTGTGGGGCTGCC
TGCCCTGGCCGCCGCCCACTCATGGATCGTCTGTACGGACTACCTGGAGA
ACAACGGCTGGTACTGGGACCAGGCCAAGTGCAGGGGATGGCCGCGGGGT
GCCACATTTTACAACCTTCGGTTTGGAACATTCGGGACGCATAACAACTA
CACATGGCGCCTGGACAACCACCCAGAGGAGCGGGCTCTGTGTAAAGTGT
CCCGAAACGACGACCGCCGATACACCGAGGAAACCCCGATGGCTGCCTAC
TACCTGGGCCAGGAGGTAGTTTTGACTCACCCAGCAAACAACCACGTGGC
GGAATCCAAGTGCAGAGGGAGGACCGCCATGGACTGGGAGAACCTGATGT
TTGTGGTGGACGGAGACCAGGACCCCTGCTGTATCGACTCGGACAAACTC
ATCCAGATCATGGACATGGGGGTGTCGCCTTACGGGCGTGAGCTTTCCGA
TGAGGTGCTGTCCACCTACCCGAAACCCGGCTTCCAGAACGTGCCAAAGT
TCTGTGAGAATCCTGAGGACGCCATGGGGACCTACAACTTCACCGTCCCG
ATAGACATGCAACCAGGCCGCCATATCTTCGTCTGGAAGTGGATACGCGA
TCCTACCGTCAACCCCTTCACCACCTGCTGGGAGGCTGACGTGTTCGCCA
CCAAGGCGGAGAGAGACGCGCACTACGCGGCAACGGGTCGTTCTACCGAG
GACATGTGGGATTTCTACAAAGTCCACAACATCGTGGACGGTGTGATCAT
GGACCCGGTGGACCCGTCCATCAACGAGATCATCACTGGATGAATGAAGC
TCTTCGTCGCGCTCTTGGCTGTGGGGCTGCCTGCCCTGGCCGCCGCCCAC
TCATGGATCGTCTGTACGGACTACCTGGAGAACAACGGCTGGTACTGGGA
CCAGGCCAAGTGCAGGGGATGGCCGCGGGGTGCCACATTTTACAACCTTC
GGTTTGGAACATTCGGGACGCATAACAACTACACATGGCGCCTGGACAAC
CACCCAGAGGAGCGGGCTCTGTGTAAAGTGTCCCGAAACGACGACCGCCG
ATACACCGAGGAAACCCCGATGGCTGCCTACTACCTGGGCCAGGAGGTAG
TTTTGACTCACCCAGCAAACAACCACGTGGCGGAATCCAAGTGCAGAGGG
AGGACCGCCATGGACTGGGAGAACCTGATGTTTGTGGTGGACGGAGACCA
GGACCCCTGCTGTATCGACTCGGACAAACTCATCCAGATCATGGACATGG
GGGTGTCGCCTTACGGGCGTGAGCTTTCCGATGAGGTGCTGTCCACCTAC
CCGAAACCCGGCTTCCAGAACGTGCCAAAGTTCTGTGAGAATCCTGAGGA
CGCCATGGGGACCTACAACTTCACCGTCCCGATAGACATGCAACCAGGCC
GCCATATCTTCGTCTGGAAGTGGATACGCGATCCTACCGTCAACCCCTTC
ACCACCTGCTGGGAGGCTGACGTGTTCGCCACCAAGGCGGAGAGAGACGC
GCACTACGCGGCAACGGGTCGTTCTACCGAGGACATGTGGGATTTCTACA
AAGTCCACAACATCGTGGACGGTGTGATCATGGACCCGGTGGACCCGTCC
ATCAACGAGATCATCACTGGATGAATGAAGCTCTTCGTCGCGCTCTTGGC
TGTGGGGCTGCCTGCCCTGGCCGCCGCCCACTCATGGATCGTCTGTACGG
ACTACCTGGAGAACAACGGCTGGTACTGGGACCAGGCCAAGTGCAGGGGA
TGGCCGCGGGGTGCCACATTTTACAACCTTCGGTTTGGAACATTCGGGAC
GCATAACAACTACACATGGCGCCTGGACAACCACCCAGAGGAGCGGGCTC
TGTGTAAAGTGTCCCGAAACGACGACCGCCGATACACCGAGGAAACCCCG
ATGGCTGCCTACTACCTGGGCCAGGAGGTAGTTTTGACTCACCCAGCAAA
CAACCACGTGGCGGAATCCAAGTGCAGAGGGAGGACCGCCATGGACTGGG
AGAACCTGATGTTTGTGGTGGACGGAGACCAGGACCCCTGCTGTATCGAC
TCGGACAAACTCATCCAGATCATGGACATGGGGGTGTCGCCTTACGGGCG
TGAGCTTTCCGATGAGGTGCTGTCCACCTACCCGAAACCCGGCTTCCAGA
ACGTGCCAAAGTTCTGTGAGAATCCTGAGGACGCCATGGGGACCTACAAC
TTCACCGTCCCGATAGACATGCAACCAGGCCGCCATATCTTCGTCTGGAA
GTGGATACGCGATCCTACCGTCAACCCCTTCACCACCTGCTGGGAGGCTG
ACGTGTTCGCCACCAAGGCGGAGAGAGACGCGCACTACGCGGCAACGGGT
CGTTCTACCGAGGACATGTGGGATTTCTACAAAGTCCACAACATCGTGGA
CGGTGTGATCATGGACCCGGTGGACCCGTCCATCAACGAGATCATCACTG
GATGAATGAAGCTCTTCGTCGCGCTCTTGGCTGTGGGGCTGCCTGCCCTG
GCCGCCGCCCACTCATGGATCGTCTGTACGGACTACCTGGAGAACAACGG
CTGGTACTGGGACCAGGCCAAGTGCAGGGGATGGCCGCGGGGTGCCACAT
TTTACAACCTTCGGTTTGGAACATTCGGGACGCATAACAACTACACATGG
CGCCTGGACAACCACCCAGAGGAGCGGGCTCTGTGTAAAGTGTCCCGAAA
CGACGACCGCCGATACACCGAGGAAACCCCGATGGCTGCCTACTACCTGG
GCCAGGAGGTAGTTTTGACTCACCCAGCAAACAACCACGTGGCGGAATCC
AAGTGCAGAGGGAGGACCGCCATGGACTGGGAGAACCTGATGTTTGTGGT
GGACGGAGACCAGGACCCCTGCTGTATCGACTCGGACAAACTCATCCAGA
TCATGGACATGGGGGTGTCGCCTTACGGGCGTGAGCTTTCCGATGAGGTG
CTGTCCACCTACCCGAAACCCGGCTTCCAGAACGTGCCAAAGTTCTGTGA
GAATCCTGAGGACGCCATGGGGACCTACAACTTCACCGTCCCGATAGACA
TGCAACCAGGCCGCCATATCTTCGTCTGGAAGTGGATACGCGATCCTACC
GTCAACCCCTTCACCACCTGCTGGGAGGCTGACGTGTTCGCCACCAAGGC
GGAGAGAGACGCGCACTACGCGGCAACGGGTCGTTCTACCGAGGACATGT
GGGATTTCTACAAAGTCCACAACATCGTGGACGGTGTGATCATGGACCCG
GTGGACCCGTCCATCAACGAGATCATCACTGGATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000298 | genome | Sc0000298:55361..57863 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96015_evm2 |
| Biotype | protein_coding |
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