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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96013_evm0 >transcript:BL96013_evm0-protein ID=transcript:BL96013_evm0-protein|Name=transcript:BL96013_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=276bp
MKLFVALLAVGLPALAAAHSWIVCTDYLENNGWYWDQAKCRGWPRAATRF
NLRFGKFGATNTYTHRLDNHPEERGLCKTSRDDDRSYDADTPMAAYYLGQ
KVVLPHPANNHVAESRCSYRAIVDTENLMFVVDGDEDPCCIDSTKLIQIM
DMGVSPYGRELSDEVLSTYPKPGFQNVPKFCEDPEDSMGTYNFTVPMDLQ
PGRHTFVWKWIRSPTVAPFTTCWEADVFATKAERDALYLATGRSTEDAWD
FYQIHNIVDGMIMDPVDPSINEIITG Run BLAST on NCBI mRNA from alignment at Sc0000298:50435..53196+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96013_evm0 ID=transcript:BL96013_evm0|Name=transcript:BL96013_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2762bp|location=Sequence derived from alignment at Sc0000298:50435..53196+ (Branchiostoma lanceolatum)
ATGAAGCTCTTCGTCGCGCTCTTGGCTGTCGGGCTGCCTGCCCTGGCCGC
CGCCCACTCCTGGATCGTCTGTACGGACTACCTGGAGAACAACGGCTGGT
ACTGGGACCAGGCTAAGTGTAGAGGATGGCCACGAGCTGCCACGAGGTAA
AACCTGTTTATCACTGGGTTGTTTTTAACTGAAAATTTGCCTCCAAATTT
TGAAGTGCGTTGTTATCGTCCTCGATATCTTAAAATACAACCAATTCTGT
ACGTTCCCTCAAACGTTTGTTAATTGTCAACACTTCACAGATAGCTTCAC
AATCCACATTTCAGGTTCAACCTTCGTTTTGGAAAGTTCGGGGCGACTAA
TACTTACACCCACCGCCTTGACAACCATCCTGAGGAAAGGGGTTTATGTA
AGACAAGCAGAGATGACGACAGGTCGTACGACGCTGACACCCCCATGGCT
GCCTACTACCTGGGGCAGAAGGTCGTCCTTCCTCATCCCGCCAATGTAAG
ACATGCTCTAATACTTCTCTGGAGGCTGTAGCCGTATGTTTGTAATGTTC
ATAGTCTAATGATAAAGCCACTCCTTACGGCGCGGCCCGGAATGTTGGGC
GCATGGCAGAACTCAGTAGGTCATGGGTCAGGCACCGGATGTCAGGGCCA
AATTGACCGTCCAAATTCGTGCTTTCATTCGTGTTGATACAAACGTTATC
AACAACTTTGCAATATGCTATTCTACCAACACAGAGTAGCTGTCACTGTA
ACAGTTTAATGATTTTTTTTCGTTGTATACTTTGCTGACTTCTAACACTT
AAAACTGTTCTCTTCACTCCAGAACCATGTGGCGGAATCAAGGTGCAGCT
ATAGAGCCATTGTCGACACGGAGAACCTGATGTTTGTGGTGGACGGAGAC
GAGGACCCCTGCTGTATCGACTCTACCAAACTCATCCAAATCATGGACAT
GGGGGTGTCACCATATGGTTCGTATGGTATCAATATCTATGAATCGCTTT
CTGTCGCTTACTTGATCAGTCAAGAGTCGTCTTAGGACCTGTCTAATGGA
AACCGTAAGGACATTGAATTTACGAGTCAGTCAGTAGCCAGTTTCATAAT
ATTGTATGTGATATGCAGGACGTGAGCTTTCCGATGAGGTGCTGTCCACC
TACCCAAAGCCCGGCTTCCAAAACGTGCCTAAGTTCTGTGAGGATCCTGA
AGACTCCATGGGGACCTACAACTTCACCGTCCCGATGGACTTACAACCAG
GTCATGCCCTTCTAAATTTAATGCTCTATATGCATATCGAAATTACTAGT
GTTTCTTCGAGCCATTCTTGTCTCATACCTCACTTCTATGTTTTTAAAGT
CTTCTTTTCAAAAGTTTTATACCTGTCATGCAACAATTCAGGCCGTCACA
CCTTCGTATGGAAGTGGATCCGCTCTCCTACAGTGGCCCCATTCACCACC
TGCTGGGAGGCGGACGTGTTCGCCACCAAGGCGGAGAGAGACGCCTTGTA
CTTGGCCACGGTAATCTTTCCCTTTCTTGATCATCCCGAATCTTGACCTT
TGTCGAATCTTGGCCTTCCTGTGTCCCGAAAAGGCTCTTTCAAACTCAAT
CTGCAAGGCTAATCAAGTGAAGAAACCACTGAAAGAGTATTGCTTATAGC
AAGGTGTAACCGGTCTCACGGTTTGCCAGGTTTTTGCTACCGATTGGTAA
AGACATTCAAACGTCAATACCTACCTAGTCCCTTGACCTCCCGATGTTAA
TGCCGAATTCTACATCACATTTGCTGTAATAGGAACTAACAGGTTGACTT
TCACAACAAGGTAAGAAACAACAATGGGACTGCATTCTGACAGTTCATTA
TATATATTTCAAGACTATAGACCATGTGTTTTGTTACGTCATGCATGTTT
CTTATCTACAGGGTCGCTCCACCGAAGACGCGTGGGATTTCTACCAAATC
CACAACATCGTGGACGGTGTGATTATGGACCCGGTGGACCCGTCCATCAA
CGAGATCATCACTGGATGAGGACAAAACGAAAAACAAGCGAAAACACATA
CAGCTGCCTATGGTAGCAAAATAAAGTTTATCAGTCTAAATCACGCGACT
CGTGTGGTTGTTATAGTCAATGCCTATAAACCCCTTATTTCTTTGTTTAG
ATAGGCTTACTTCATACAGGCTAGTAATATTTTTAAAAAAGGTATCATGC
CGCTCCTATGTTTGTATACCCTACATAAAGGTTGTTGCGTAAAAGGTAAA
TATCATTTTCGGTATGCATATATTTGTATTGCTTGCCGCACAAATAGCCA
TGACCCGTGACCTATATCGGAAATTTTTGGGCTCTCTTCACGTGCCATCA
TCGCATTGATAAAGCAACGAAACAGGGCGGGGCGCCAAATTATCTCTCTT
TATCTACATGTATATCATTCTTCACAGCATGACAGTAGTCCTGAGAGATC
CAGGCTCTGGCAGGAATACATTGCCATAACATTTGCATTTCTGTCTGTCA
TTGTAATAACATCATGAGGTAGTCTGTTCCAAACTTCAAACGTACTACTA
CTAGTACTAGGTAAAGAGGGTNTGAGACGAAACAAAGTCCATTATATATT
TCAAGAGTGATTTATTTCTAGTTCCACCTCTACATGCTTGTTTCTTATCT
ACAGGGTCGGTCCACCGAAGACGCGTGGGACTTCTATCAAATCCACAACA
TCGTGGACGGCATGATCATGGACCCGGTGGACCCGTCCATCAACGAGATC
ATCACTGGATGA Coding sequence (CDS) from alignment at Sc0000298:50435..53196+ >transcript:BL96013_evm0 ID=transcript:BL96013_evm0|Name=transcript:BL96013_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4986bp|location=Sequence derived from alignment at Sc0000298:50435..53196+ (Branchiostoma lanceolatum)
ATGAAGCTCTTCGTCGCGCTCTTGGCTGTCGGGCTGCCTGCCCTGGCCGC
CGCCCACTCCTGGATCGTCTGTACGGACTACCTGGAGAACAACGGCTGGT
ACTGGGACCAGGCTAAGTGTAGAGGATGGCCACGAGCTGCCACGAGGTTC
AACCTTCGTTTTGGAAAGTTCGGGGCGACTAATACTTACACCCACCGCCT
TGACAACCATCCTGAGGAAAGGGGTTTATGTAAGACAAGCAGAGATGACG
ACAGGTCGTACGACGCTGACACCCCCATGGCTGCCTACTACCTGGGGCAG
AAGGTCGTCCTTCCTCATCCCGCCAATAACCATGTGGCGGAATCAAGGTG
CAGCTATAGAGCCATTGTCGACACGGAGAACCTGATGTTTGTGGTGGACG
GAGACGAGGACCCCTGCTGTATCGACTCTACCAAACTCATCCAAATCATG
GACATGGGGGTGTCACCATATGGACGTGAGCTTTCCGATGAGGTGCTGTC
CACCTACCCAAAGCCCGGCTTCCAAAACGTGCCTAAGTTCTGTGAGGATC
CTGAAGACTCCATGGGGACCTACAACTTCACCGTCCCGATGGACTTACAA
CCAGGCCGTCACACCTTCGTATGGAAGTGGATCCGCTCTCCTACAGTGGC
CCCATTCACCACCTGCTGGGAGGCGGACGTGTTCGCCACCAAGGCGGAGA
GAGACGCCTTGTACTTGGCCACGGGTCGGTCCACCGAAGACGCGTGGGAC
TTCTATCAAATCCACAACATCGTGGACGGCATGATCATGGACCCGGTGGA
CCCGTCCATCAACGAGATCATCACTGGATGAATGAAGCTCTTCGTCGCGC
TCTTGGCTGTCGGGCTGCCTGCCCTGGCCGCCGCCCACTCCTGGATCGTC
TGTACGGACTACCTGGAGAACAACGGCTGGTACTGGGACCAGGCTAAGTG
TAGAGGATGGCCACGAGCTGCCACGAGGTTCAACCTTCGTTTTGGAAAGT
TCGGGGCGACTAATACTTACACCCACCGCCTTGACAACCATCCTGAGGAA
AGGGGTTTATGTAAGACAAGCAGAGATGACGACAGGTCGTACGACGCTGA
CACCCCCATGGCTGCCTACTACCTGGGGCAGAAGGTCGTCCTTCCTCATC
CCGCCAATAACCATGTGGCGGAATCAAGGTGCAGCTATAGAGCCATTGTC
GACACGGAGAACCTGATGTTTGTGGTGGACGGAGACGAGGACCCCTGCTG
TATCGACTCTACCAAACTCATCCAAATCATGGACATGGGGGTGTCACCAT
ATGGACGTGAGCTTTCCGATGAGGTGCTGTCCACCTACCCAAAGCCCGGC
TTCCAAAACGTGCCTAAGTTCTGTGAGGATCCTGAAGACTCCATGGGGAC
CTACAACTTCACCGTCCCGATGGACTTACAACCAGGCCGTCACACCTTCG
TATGGAAGTGGATCCGCTCTCCTACAGTGGCCCCATTCACCACCTGCTGG
GAGGCGGACGTGTTCGCCACCAAGGCGGAGAGAGACGCCTTGTACTTGGC
CACGGGTCGGTCCACCGAAGACGCGTGGGACTTCTATCAAATCCACAACA
TCGTGGACGGCATGATCATGGACCCGGTGGACCCGTCCATCAACGAGATC
ATCACTGGATGAATGAAGCTCTTCGTCGCGCTCTTGGCTGTCGGGCTGCC
TGCCCTGGCCGCCGCCCACTCCTGGATCGTCTGTACGGACTACCTGGAGA
ACAACGGCTGGTACTGGGACCAGGCTAAGTGTAGAGGATGGCCACGAGCT
GCCACGAGGTTCAACCTTCGTTTTGGAAAGTTCGGGGCGACTAATACTTA
CACCCACCGCCTTGACAACCATCCTGAGGAAAGGGGTTTATGTAAGACAA
GCAGAGATGACGACAGGTCGTACGACGCTGACACCCCCATGGCTGCCTAC
TACCTGGGGCAGAAGGTCGTCCTTCCTCATCCCGCCAATAACCATGTGGC
GGAATCAAGGTGCAGCTATAGAGCCATTGTCGACACGGAGAACCTGATGT
TTGTGGTGGACGGAGACGAGGACCCCTGCTGTATCGACTCTACCAAACTC
ATCCAAATCATGGACATGGGGGTGTCACCATATGGACGTGAGCTTTCCGA
TGAGGTGCTGTCCACCTACCCAAAGCCCGGCTTCCAAAACGTGCCTAAGT
TCTGTGAGGATCCTGAAGACTCCATGGGGACCTACAACTTCACCGTCCCG
ATGGACTTACAACCAGGCCGTCACACCTTCGTATGGAAGTGGATCCGCTC
TCCTACAGTGGCCCCATTCACCACCTGCTGGGAGGCGGACGTGTTCGCCA
CCAAGGCGGAGAGAGACGCCTTGTACTTGGCCACGGGTCGGTCCACCGAA
GACGCGTGGGACTTCTATCAAATCCACAACATCGTGGACGGCATGATCAT
GGACCCGGTGGACCCGTCCATCAACGAGATCATCACTGGATGAATGAAGC
TCTTCGTCGCGCTCTTGGCTGTCGGGCTGCCTGCCCTGGCCGCCGCCCAC
TCCTGGATCGTCTGTACGGACTACCTGGAGAACAACGGCTGGTACTGGGA
CCAGGCTAAGTGTAGAGGATGGCCACGAGCTGCCACGAGGTTCAACCTTC
GTTTTGGAAAGTTCGGGGCGACTAATACTTACACCCACCGCCTTGACAAC
CATCCTGAGGAAAGGGGTTTATGTAAGACAAGCAGAGATGACGACAGGTC
GTACGACGCTGACACCCCCATGGCTGCCTACTACCTGGGGCAGAAGGTCG
TCCTTCCTCATCCCGCCAATAACCATGTGGCGGAATCAAGGTGCAGCTAT
AGAGCCATTGTCGACACGGAGAACCTGATGTTTGTGGTGGACGGAGACGA
GGACCCCTGCTGTATCGACTCTACCAAACTCATCCAAATCATGGACATGG
GGGTGTCACCATATGGACGTGAGCTTTCCGATGAGGTGCTGTCCACCTAC
CCAAAGCCCGGCTTCCAAAACGTGCCTAAGTTCTGTGAGGATCCTGAAGA
CTCCATGGGGACCTACAACTTCACCGTCCCGATGGACTTACAACCAGGCC
GTCACACCTTCGTATGGAAGTGGATCCGCTCTCCTACAGTGGCCCCATTC
ACCACCTGCTGGGAGGCGGACGTGTTCGCCACCAAGGCGGAGAGAGACGC
CTTGTACTTGGCCACGGGTCGGTCCACCGAAGACGCGTGGGACTTCTATC
AAATCCACAACATCGTGGACGGCATGATCATGGACCCGGTGGACCCGTCC
ATCAACGAGATCATCACTGGATGAATGAAGCTCTTCGTCGCGCTCTTGGC
TGTCGGGCTGCCTGCCCTGGCCGCCGCCCACTCCTGGATCGTCTGTACGG
ACTACCTGGAGAACAACGGCTGGTACTGGGACCAGGCTAAGTGTAGAGGA
TGGCCACGAGCTGCCACGAGGTTCAACCTTCGTTTTGGAAAGTTCGGGGC
GACTAATACTTACACCCACCGCCTTGACAACCATCCTGAGGAAAGGGGTT
TATGTAAGACAAGCAGAGATGACGACAGGTCGTACGACGCTGACACCCCC
ATGGCTGCCTACTACCTGGGGCAGAAGGTCGTCCTTCCTCATCCCGCCAA
TAACCATGTGGCGGAATCAAGGTGCAGCTATAGAGCCATTGTCGACACGG
AGAACCTGATGTTTGTGGTGGACGGAGACGAGGACCCCTGCTGTATCGAC
TCTACCAAACTCATCCAAATCATGGACATGGGGGTGTCACCATATGGACG
TGAGCTTTCCGATGAGGTGCTGTCCACCTACCCAAAGCCCGGCTTCCAAA
ACGTGCCTAAGTTCTGTGAGGATCCTGAAGACTCCATGGGGACCTACAAC
TTCACCGTCCCGATGGACTTACAACCAGGCCGTCACACCTTCGTATGGAA
GTGGATCCGCTCTCCTACAGTGGCCCCATTCACCACCTGCTGGGAGGCGG
ACGTGTTCGCCACCAAGGCGGAGAGAGACGCCTTGTACTTGGCCACGGGT
CGGTCCACCGAAGACGCGTGGGACTTCTATCAAATCCACAACATCGTGGA
CGGCATGATCATGGACCCGGTGGACCCGTCCATCAACGAGATCATCACTG
GATGAATGAAGCTCTTCGTCGCGCTCTTGGCTGTCGGGCTGCCTGCCCTG
GCCGCCGCCCACTCCTGGATCGTCTGTACGGACTACCTGGAGAACAACGG
CTGGTACTGGGACCAGGCTAAGTGTAGAGGATGGCCACGAGCTGCCACGA
GGTTCAACCTTCGTTTTGGAAAGTTCGGGGCGACTAATACTTACACCCAC
CGCCTTGACAACCATCCTGAGGAAAGGGGTTTATGTAAGACAAGCAGAGA
TGACGACAGGTCGTACGACGCTGACACCCCCATGGCTGCCTACTACCTGG
GGCAGAAGGTCGTCCTTCCTCATCCCGCCAATAACCATGTGGCGGAATCA
AGGTGCAGCTATAGAGCCATTGTCGACACGGAGAACCTGATGTTTGTGGT
GGACGGAGACGAGGACCCCTGCTGTATCGACTCTACCAAACTCATCCAAA
TCATGGACATGGGGGTGTCACCATATGGACGTGAGCTTTCCGATGAGGTG
CTGTCCACCTACCCAAAGCCCGGCTTCCAAAACGTGCCTAAGTTCTGTGA
GGATCCTGAAGACTCCATGGGGACCTACAACTTCACCGTCCCGATGGACT
TACAACCAGGCCGTCACACCTTCGTATGGAAGTGGATCCGCTCTCCTACA
GTGGCCCCATTCACCACCTGCTGGGAGGCGGACGTGTTCGCCACCAAGGC
GGAGAGAGACGCCTTGTACTTGGCCACGGGTCGGTCCACCGAAGACGCGT
GGGACTTCTATCAAATCCACAACATCGTGGACGGCATGATCATGGACCCG
GTGGACCCGTCCATCAACGAGATCATCACTGGATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000298 | genome | Sc0000298:50435..53196 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96013_evm0 |
| Biotype | protein_coding |
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