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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95821_evm1 >transcript:BL95821_evm1-protein ID=transcript:BL95821_evm1-protein|Name=transcript:BL95821_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=376bp
MGDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ
KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT
GIVLDSGDGVSHTVPIYEGYALPHAILRIDLAGRDLTDYLMKILTERGYS
FTTTAEREIVRDIKEKLCYVALDYEAEMDTAAQSSSLEKSYELPDGQVIT
IGNERFRAPETLFQPSFIGMEQVGIHEATFNSIGKCDIDIRKDLYANTVL
SGGTTMFPGIADRMQKEITGLAPPTMKIKIIAPPERKYSVWIGGSILASL
STFQQMWISKQEYDESGPSIVHRKCF Run BLAST on NCBI mRNA from alignment at Sc0000141:39136..41124- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95821_evm1 ID=transcript:BL95821_evm1|Name=transcript:BL95821_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1989bp|location=Sequence derived from alignment at Sc0000141:39136..41124- (Branchiostoma lanceolatum)
ATGGGTGATGAAGATGTTGCTGCTCTGGTTGTGGACAACGGGTCCGGGAT
GTGTAAGGCCGGCTTCGCTGGGGACGATGCCCCGAGGGCCGTCTTTCCGT
CCATCGTGGGTAGGCCGAGACATCAGGTATGACTTGCATATGCACTGTTT
TCAGTCGAATACGCCTGCTTTTGTTTCTAAAGCTAAATGCACAAATAATG
TGTAAATACATTACTTTATCATAACTATAAACTGTTGACATTTGTTCGTA
TTAAATTTTTCTCCAGGGTGTGATGGTCGGTATGGGCCAGAAAGACAGCT
ATGTGGGTGACGAGGCCCAGAGCAAGAGAGGCATCTTGACCTTGAAGTAC
CCAATCGAGCACGGTATCGTCACCAACTGGGACGATATGGAGAAGATCTG
GCACCACACCTTCTACAACGAGCTGCGTGTCGCTCCCGAGGAGCATCCCG
TGCTTCTCACTGAGGCTCCGCTCAACCCCAAGGCTAACAGGGAGAAGATG
ACACAGGTTGGTGTGTGGTCTCCTCCATGTTATTTCCAACATAATGATAA
GCTCTTAGGTGGAATATTTTATTGTAGCAAAACGGCAGCAAGTGGCTCAT
GCTGATCTGAATTGTACTTTCTTTTTCGGACATACTTTTGCATACACGCC
CCGGTAACATCATGGTTACATCTTCATCTTCAGATCATGTTCGAGACCTT
CAACAGCCCCGCCATGTACGTGGCCATCCAGGCCGTCCTGTCCCTGTACG
CCTCCGGCCGGACGACTGGGATCGTGCTGGACTCCGGTGATGGTGTGTCC
CACACGGTGCCCATCTATGAAGGCTACGCTCTCCCACATGCCATTCTCCG
TATTGACCTTGCTGGAAGAGACCTGACAGACTATCTGATGAAGATCCTGA
CAGAAAGGGGATACTCTTTCACCACCACAGGTGTGTTCACTAGGTATATC
GCAAATGTATTCTTGATATATCAGTATTAGCATTACATTGTCCAGGGGTT
AAAGAAGAGCAAGTGTCGCTTAGCTCTACATATTTGCAGTAACTATGGTC
ATAGGATTTTTTCAATCCAAACCTCACTCTGTGCCATCTATGCCATTTGT
ATAGCCGAGAGAGAAATCGTTCGTGACATCAAGGAGAAGCTGTGCTACGT
CGCCCTGGACTACGAAGCAGAGATGGATACGGCTGCACAGAGCTCCAGTC
TGGAGAAGAGCTACGAGCTGCCTGATGGCCAGGTCATCACCATCGGCAAC
GAGAGGTTCAGGGCGCCAGAGACCCTGTTCCAACCTTCATTCATTGGTAA
ATGTCCAGCTACATTCATGTTGACGATACCGAATCGATGTTGAAGCTTCA
TTACATTTTTATCCATCTATCTATATATAAGCATCCACATCTACCGCAAA
AAGCTAGAGGGTTTATTTTTGGAATGATTCTTTTCTTGGTAGGAATGGAA
CAGGTGGGAATTCACGAGGCAACATTCAACTCTATCGGCAAGTGTGATAT
CGACATCCGTAAGGACCTGTACGCCAACACTGTTCTCTCCGGCGGTACAA
CTATGTTTCCAGGTAGGTACATCAACGGACCAGTAGGAAATAGCGATAAC
CTCTCGTATTTGTCGATGCCAATTTGTGTCTTTTTTTCTTTCTTTTGGCT
CACGTTACATCGTGTTAGAATAACGCTTTTGTTGGTACTAGTGTCAGGAA
AAGAAAACGACAGACTTATTCATCGATTGATTTGAAGAGCTTTTGATGAT
GGCGATTCTGATAATATTTTTGGCCTTGAACAGGCATAGCGGACCGCATG
CAGAAGGAGATCACCGGCCTGGCTCCTCCAACCATGAAGATCAAGATCAT
CGCTCCTCCCGAGAGGAAGTACTCCGTGTGGATCGGTGGGTCCATCCTTG
CCTCCCTGTCCACCTTCCAACAGATGTGGATCAGCAAGCAAGAGTACGAC
GAGTCGGGACCCTCCATCGTCCATCGCAAGTGCTTCTAA Coding sequence (CDS) from alignment at Sc0000141:39136..41124- >transcript:BL95821_evm1 ID=transcript:BL95821_evm1|Name=transcript:BL95821_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=6786bp|location=Sequence derived from alignment at Sc0000141:39136..41124- (Branchiostoma lanceolatum)
ATGGGTGATGAAGATGTTGCTGCTCTGGTTGTGGACAACGGGTCCGGGAT
GTGTAAGGCCGGCTTCGCTGGGGACGATGCCCCGAGGGCCGTCTTTCCGT
CCATCGTGGGTAGGCCGAGACATCAGGGTGTGATGGTCGGTATGGGCCAG
AAAGACAGCTATGTGGGTGACGAGGCCCAGAGCAAGAGAGGCATCTTGAC
CTTGAAGTACCCAATCGAGCACGGTATCGTCACCAACTGGGACGATATGG
AGAAGATCTGGCACCACACCTTCTACAACGAGCTGCGTGTCGCTCCCGAG
GAGCATCCCGTGCTTCTCACTGAGGCTCCGCTCAACCCCAAGGCTAACAG
GGAGAAGATGACACAGATCATGTTCGAGACCTTCAACAGCCCCGCCATGT
ACGTGGCCATCCAGGCCGTCCTGTCCCTGTACGCCTCCGGCCGGACGACT
GGGATCGTGCTGGACTCCGGTGATGGTGTGTCCCACACGGTGCCCATCTA
TGAAGGCTACGCTCTCCCACATGCCATTCTCCGTATTGACCTTGCTGGAA
GAGACCTGACAGACTATCTGATGAAGATCCTGACAGAAAGGGGATACTCT
TTCACCACCACAGCCGAGAGAGAAATCGTTCGTGACATCAAGGAGAAGCT
GTGCTACGTCGCCCTGGACTACGAAGCAGAGATGGATACGGCTGCACAGA
GCTCCAGTCTGGAGAAGAGCTACGAGCTGCCTGATGGCCAGGTCATCACC
ATCGGCAACGAGAGGTTCAGGGCGCCAGAGACCCTGTTCCAACCTTCATT
CATTGGAATGGAACAGGTGGGAATTCACGAGGCAACATTCAACTCTATCG
GCAAGTGTGATATCGACATCCGTAAGGACCTGTACGCCAACACTGTTCTC
TCCGGCGGTACAACTATGTTTCCAGGCATAGCGGACCGCATGCAGAAGGA
GATCACCGGCCTGGCTCCTCCAACCATGAAGATCAAGATCATCGCTCCTC
CCGAGAGGAAGTACTCCGTGTGGATCGGTGGGTCCATCCTTGCCTCCCTG
TCCACCTTCCAACAGATGTGGATCAGCAAGCAAGAGTACGACGAGTCGGG
ACCCTCCATCGTCCATCGCAAGTGCTTCTAAATGGGTGATGAAGATGTTG
CTGCTCTGGTTGTGGACAACGGGTCCGGGATGTGTAAGGCCGGCTTCGCT
GGGGACGATGCCCCGAGGGCCGTCTTTCCGTCCATCGTGGGTAGGCCGAG
ACATCAGGGTGTGATGGTCGGTATGGGCCAGAAAGACAGCTATGTGGGTG
ACGAGGCCCAGAGCAAGAGAGGCATCTTGACCTTGAAGTACCCAATCGAG
CACGGTATCGTCACCAACTGGGACGATATGGAGAAGATCTGGCACCACAC
CTTCTACAACGAGCTGCGTGTCGCTCCCGAGGAGCATCCCGTGCTTCTCA
CTGAGGCTCCGCTCAACCCCAAGGCTAACAGGGAGAAGATGACACAGATC
ATGTTCGAGACCTTCAACAGCCCCGCCATGTACGTGGCCATCCAGGCCGT
CCTGTCCCTGTACGCCTCCGGCCGGACGACTGGGATCGTGCTGGACTCCG
GTGATGGTGTGTCCCACACGGTGCCCATCTATGAAGGCTACGCTCTCCCA
CATGCCATTCTCCGTATTGACCTTGCTGGAAGAGACCTGACAGACTATCT
GATGAAGATCCTGACAGAAAGGGGATACTCTTTCACCACCACAGCCGAGA
GAGAAATCGTTCGTGACATCAAGGAGAAGCTGTGCTACGTCGCCCTGGAC
TACGAAGCAGAGATGGATACGGCTGCACAGAGCTCCAGTCTGGAGAAGAG
CTACGAGCTGCCTGATGGCCAGGTCATCACCATCGGCAACGAGAGGTTCA
GGGCGCCAGAGACCCTGTTCCAACCTTCATTCATTGGAATGGAACAGGTG
GGAATTCACGAGGCAACATTCAACTCTATCGGCAAGTGTGATATCGACAT
CCGTAAGGACCTGTACGCCAACACTGTTCTCTCCGGCGGTACAACTATGT
TTCCAGGCATAGCGGACCGCATGCAGAAGGAGATCACCGGCCTGGCTCCT
CCAACCATGAAGATCAAGATCATCGCTCCTCCCGAGAGGAAGTACTCCGT
GTGGATCGGTGGGTCCATCCTTGCCTCCCTGTCCACCTTCCAACAGATGT
GGATCAGCAAGCAAGAGTACGACGAGTCGGGACCCTCCATCGTCCATCGC
AAGTGCTTCTAAATGGGTGATGAAGATGTTGCTGCTCTGGTTGTGGACAA
CGGGTCCGGGATGTGTAAGGCCGGCTTCGCTGGGGACGATGCCCCGAGGG
CCGTCTTTCCGTCCATCGTGGGTAGGCCGAGACATCAGGGTGTGATGGTC
GGTATGGGCCAGAAAGACAGCTATGTGGGTGACGAGGCCCAGAGCAAGAG
AGGCATCTTGACCTTGAAGTACCCAATCGAGCACGGTATCGTCACCAACT
GGGACGATATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTGCGT
GTCGCTCCCGAGGAGCATCCCGTGCTTCTCACTGAGGCTCCGCTCAACCC
CAAGGCTAACAGGGAGAAGATGACACAGATCATGTTCGAGACCTTCAACA
GCCCCGCCATGTACGTGGCCATCCAGGCCGTCCTGTCCCTGTACGCCTCC
GGCCGGACGACTGGGATCGTGCTGGACTCCGGTGATGGTGTGTCCCACAC
GGTGCCCATCTATGAAGGCTACGCTCTCCCACATGCCATTCTCCGTATTG
ACCTTGCTGGAAGAGACCTGACAGACTATCTGATGAAGATCCTGACAGAA
AGGGGATACTCTTTCACCACCACAGCCGAGAGAGAAATCGTTCGTGACAT
CAAGGAGAAGCTGTGCTACGTCGCCCTGGACTACGAAGCAGAGATGGATA
CGGCTGCACAGAGCTCCAGTCTGGAGAAGAGCTACGAGCTGCCTGATGGC
CAGGTCATCACCATCGGCAACGAGAGGTTCAGGGCGCCAGAGACCCTGTT
CCAACCTTCATTCATTGGAATGGAACAGGTGGGAATTCACGAGGCAACAT
TCAACTCTATCGGCAAGTGTGATATCGACATCCGTAAGGACCTGTACGCC
AACACTGTTCTCTCCGGCGGTACAACTATGTTTCCAGGCATAGCGGACCG
CATGCAGAAGGAGATCACCGGCCTGGCTCCTCCAACCATGAAGATCAAGA
TCATCGCTCCTCCCGAGAGGAAGTACTCCGTGTGGATCGGTGGGTCCATC
CTTGCCTCCCTGTCCACCTTCCAACAGATGTGGATCAGCAAGCAAGAGTA
CGACGAGTCGGGACCCTCCATCGTCCATCGCAAGTGCTTCTAAATGGGTG
ATGAAGATGTTGCTGCTCTGGTTGTGGACAACGGGTCCGGGATGTGTAAG
GCCGGCTTCGCTGGGGACGATGCCCCGAGGGCCGTCTTTCCGTCCATCGT
GGGTAGGCCGAGACATCAGGGTGTGATGGTCGGTATGGGCCAGAAAGACA
GCTATGTGGGTGACGAGGCCCAGAGCAAGAGAGGCATCTTGACCTTGAAG
TACCCAATCGAGCACGGTATCGTCACCAACTGGGACGATATGGAGAAGAT
CTGGCACCACACCTTCTACAACGAGCTGCGTGTCGCTCCCGAGGAGCATC
CCGTGCTTCTCACTGAGGCTCCGCTCAACCCCAAGGCTAACAGGGAGAAG
ATGACACAGATCATGTTCGAGACCTTCAACAGCCCCGCCATGTACGTGGC
CATCCAGGCCGTCCTGTCCCTGTACGCCTCCGGCCGGACGACTGGGATCG
TGCTGGACTCCGGTGATGGTGTGTCCCACACGGTGCCCATCTATGAAGGC
TACGCTCTCCCACATGCCATTCTCCGTATTGACCTTGCTGGAAGAGACCT
GACAGACTATCTGATGAAGATCCTGACAGAAAGGGGATACTCTTTCACCA
CCACAGCCGAGAGAGAAATCGTTCGTGACATCAAGGAGAAGCTGTGCTAC
GTCGCCCTGGACTACGAAGCAGAGATGGATACGGCTGCACAGAGCTCCAG
TCTGGAGAAGAGCTACGAGCTGCCTGATGGCCAGGTCATCACCATCGGCA
ACGAGAGGTTCAGGGCGCCAGAGACCCTGTTCCAACCTTCATTCATTGGA
ATGGAACAGGTGGGAATTCACGAGGCAACATTCAACTCTATCGGCAAGTG
TGATATCGACATCCGTAAGGACCTGTACGCCAACACTGTTCTCTCCGGCG
GTACAACTATGTTTCCAGGCATAGCGGACCGCATGCAGAAGGAGATCACC
GGCCTGGCTCCTCCAACCATGAAGATCAAGATCATCGCTCCTCCCGAGAG
GAAGTACTCCGTGTGGATCGGTGGGTCCATCCTTGCCTCCCTGTCCACCT
TCCAACAGATGTGGATCAGCAAGCAAGAGTACGACGAGTCGGGACCCTCC
ATCGTCCATCGCAAGTGCTTCTAAATGGGTGATGAAGATGTTGCTGCTCT
GGTTGTGGACAACGGGTCCGGGATGTGTAAGGCCGGCTTCGCTGGGGACG
ATGCCCCGAGGGCCGTCTTTCCGTCCATCGTGGGTAGGCCGAGACATCAG
GGTGTGATGGTCGGTATGGGCCAGAAAGACAGCTATGTGGGTGACGAGGC
CCAGAGCAAGAGAGGCATCTTGACCTTGAAGTACCCAATCGAGCACGGTA
TCGTCACCAACTGGGACGATATGGAGAAGATCTGGCACCACACCTTCTAC
AACGAGCTGCGTGTCGCTCCCGAGGAGCATCCCGTGCTTCTCACTGAGGC
TCCGCTCAACCCCAAGGCTAACAGGGAGAAGATGACACAGATCATGTTCG
AGACCTTCAACAGCCCCGCCATGTACGTGGCCATCCAGGCCGTCCTGTCC
CTGTACGCCTCCGGCCGGACGACTGGGATCGTGCTGGACTCCGGTGATGG
TGTGTCCCACACGGTGCCCATCTATGAAGGCTACGCTCTCCCACATGCCA
TTCTCCGTATTGACCTTGCTGGAAGAGACCTGACAGACTATCTGATGAAG
ATCCTGACAGAAAGGGGATACTCTTTCACCACCACAGCCGAGAGAGAAAT
CGTTCGTGACATCAAGGAGAAGCTGTGCTACGTCGCCCTGGACTACGAAG
CAGAGATGGATACGGCTGCACAGAGCTCCAGTCTGGAGAAGAGCTACGAG
CTGCCTGATGGCCAGGTCATCACCATCGGCAACGAGAGGTTCAGGGCGCC
AGAGACCCTGTTCCAACCTTCATTCATTGGAATGGAACAGGTGGGAATTC
ACGAGGCAACATTCAACTCTATCGGCAAGTGTGATATCGACATCCGTAAG
GACCTGTACGCCAACACTGTTCTCTCCGGCGGTACAACTATGTTTCCAGG
CATAGCGGACCGCATGCAGAAGGAGATCACCGGCCTGGCTCCTCCAACCA
TGAAGATCAAGATCATCGCTCCTCCCGAGAGGAAGTACTCCGTGTGGATC
GGTGGGTCCATCCTTGCCTCCCTGTCCACCTTCCAACAGATGTGGATCAG
CAAGCAAGAGTACGACGAGTCGGGACCCTCCATCGTCCATCGCAAGTGCT
TCTAAATGGGTGATGAAGATGTTGCTGCTCTGGTTGTGGACAACGGGTCC
GGGATGTGTAAGGCCGGCTTCGCTGGGGACGATGCCCCGAGGGCCGTCTT
TCCGTCCATCGTGGGTAGGCCGAGACATCAGGGTGTGATGGTCGGTATGG
GCCAGAAAGACAGCTATGTGGGTGACGAGGCCCAGAGCAAGAGAGGCATC
TTGACCTTGAAGTACCCAATCGAGCACGGTATCGTCACCAACTGGGACGA
TATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTGCGTGTCGCTC
CCGAGGAGCATCCCGTGCTTCTCACTGAGGCTCCGCTCAACCCCAAGGCT
AACAGGGAGAAGATGACACAGATCATGTTCGAGACCTTCAACAGCCCCGC
CATGTACGTGGCCATCCAGGCCGTCCTGTCCCTGTACGCCTCCGGCCGGA
CGACTGGGATCGTGCTGGACTCCGGTGATGGTGTGTCCCACACGGTGCCC
ATCTATGAAGGCTACGCTCTCCCACATGCCATTCTCCGTATTGACCTTGC
TGGAAGAGACCTGACAGACTATCTGATGAAGATCCTGACAGAAAGGGGAT
ACTCTTTCACCACCACAGCCGAGAGAGAAATCGTTCGTGACATCAAGGAG
AAGCTGTGCTACGTCGCCCTGGACTACGAAGCAGAGATGGATACGGCTGC
ACAGAGCTCCAGTCTGGAGAAGAGCTACGAGCTGCCTGATGGCCAGGTCA
TCACCATCGGCAACGAGAGGTTCAGGGCGCCAGAGACCCTGTTCCAACCT
TCATTCATTGGAATGGAACAGGTGGGAATTCACGAGGCAACATTCAACTC
TATCGGCAAGTGTGATATCGACATCCGTAAGGACCTGTACGCCAACACTG
TTCTCTCCGGCGGTACAACTATGTTTCCAGGCATAGCGGACCGCATGCAG
AAGGAGATCACCGGCCTGGCTCCTCCAACCATGAAGATCAAGATCATCGC
TCCTCCCGAGAGGAAGTACTCCGTGTGGATCGGTGGGTCCATCCTTGCCT
CCCTGTCCACCTTCCAACAGATGTGGATCAGCAAGCAAGAGTACGACGAG
TCGGGACCCTCCATCGTCCATCGCAAGTGCTTCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000141 | genome | Sc0000141:39136..41124 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95821_evm1 |
| Biotype | protein_coding |
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