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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95816_evm1 >transcript:BL95816_evm1-protein ID=transcript:BL95816_evm1-protein|Name=transcript:BL95816_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=232bp
MERIEGEIEKRAVLEDELNMLKREQEELAMEKVDLEGQIEGAQGELDFIK
QIHKQEVAELKERIKASGNIEIESRMETVDLNAALKAIREQYEEIARRNR
ADVEKSFQDKVSAVKVEQAQSNEALTLVKSEINEIRRTLTGLQAELEALK
AQQAAILDSIASAERDTALAMEAKMEIISSLTGEVSRLKNDMERVLKEYQ
DLMNTKLALEAEINQYNSLLSGEETRMTQFSA Run BLAST on NCBI mRNA from alignment at Sc0000137:291357..295768- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95816_evm1 ID=transcript:BL95816_evm1|Name=transcript:BL95816_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=4412bp|location=Sequence derived from alignment at Sc0000137:291357..295768- (Branchiostoma lanceolatum)
ATGGAGAGGTCGACCCGTCCACAATGACAAACTTTCATCACCAAATAAAC
GGATTTCGTAAATTCCACGAATGTTAATCAGCATACACATTACTCATGGG
AACATGCTTAGTATGAAAAAGATAACTTTGAAAATGATACAACATGTCAA
AGTAACAAATAAAATCGTTTAAAACTGAGCGAGAAAGATTAAGAATGCGG
AGTTTGGTATTCTGGCCAATGCCTGTCCGCTAGACGGCAATGGCTGAGCG
AATGTACAGTGACAACAATTAGAATTGTGTGTCCCTTGATTCCATAATTG
GAATATGGTTCTACATCTAAAAGTATGATTTAAAAGACAACAAAGCACTC
AAAACGTAAAAAATCGTTCTTCATCAATGGAATTAATTCCTTGAGTGATC
TGTAAAATCTTTGGTCGCTCCTCGGTCGTAGCGAGGTTGCCACCCTAGTT
AAAGACGGGTGTTACCGACTTGGTGGCCACGTATACATGGCGTGACACCC
TACAGGAATCCGACATTACCGGTTTTATCTTAACGTGCGTATGTGACTGA
ATAGGGATTAAAAGGGACCAGGGGGCGTGGTGACAACTCAAGGTGTCACT
TGAAATATTAATGAGGTTTTGATAGCAAGCTTTGTTCGGTACTCAAGGTT
TACCATAAAAGGTCACATTGATGCAATGCCCGGGCTCAAACTTTTACTGT
AAAGCCTCATATTTATTGAAAACAAATAATTGTGTCGTAGTTTCAATGTG
GATAGTGTTATACTTGTAAACGTTATTCAAATCCAAAGTTGACCAGTTGA
CAACGTAGAAGGATTTTTCATAGCCATACTGTCAGATTATTTCGAATTCA
AGGTGCATCCAAACATAAGTATTTCTGCAACACATCATAACTTTGTTAAT
AACACTGACAAACTCTGCCATATCGTATCGATGTGACGATAAATAGATAT
CATAATGATACTATTAATCAATAACCTTCTCGGCGAAGGTGATAAAAAGT
TTGCAATACAATCGCCCCAGAATAGTGATTTAGTACAACGTAAAGCGTTG
AGAGATGTGTTTGTGTTTTCTATCCAAAAGACAGTTAAATCGAACTGTTT
CTACGTACTTGCAAGGGGGTAGGGTACATTTGTAAATATATTTGATATGT
ACATCTATATGGTACTATACCTAGTATATGAATGTTACATCTAATCATAT
GGATTTGTAGGATCGAGGGCGAGATCGAAAAGAGAGCTGTACTGGAAGAT
GAGCTCAACATGCTGAAAAGGGTAAGAAATTTAACTACGACTCAAGTAAT
CAACGTGTTTAAAAAAGAATTGTACGGCTCCACCACAAGTTAGATTATCT
AAATACGGATAAGCATATTGTTAACGTATGTGAAATTCTTTGAAACACAT
TTTGTATATTCTTGAAATAGCATCGCAATCAACTAGTATATACAATATTT
TCAATGTAACTTCCATAAAATGTTCCTATTAAATTGGAACCATATGTCTA
CTGCTGTAAGTCACGGTTATATAATGTAAACGGAGCTTTTATGCGTATGT
AATACATATGGTGTTTGTGATTTCACTTGGAACAATTCCATGGGATATTG
AAATAATATGTGTATTGATAAAACGAGATAGAGTCGAAGTATGATGTACA
GTATTACTATGTATTACAGTATTGCAGTATTACTACGATTCGCATTCACC
TCTGCTTGAAGTCAAAAGATCTCATACCAAGAGTTGATTTATTATTATCA
ATAGTTTACAAACAATCTGTCAAGGGTGCAAATATGTTCTCGTTCCCATG
CCTGTTTATCTCCTCTCGTCCCCAGGAGCAGGAGGAGCTGGCTATGGAGA
AGGTTGACCTTGAGGGTCAGATCGAGGGCGCGCAGGGCGAGTTGGACTTC
ATAAAACAGATCCACAAGCAGGAGGTGGCCGAGCTGAAGGAACGCATCAA
GGCGTCTGGGAACATTGAGATAGAGTCGAGGTAAGACGATCCTGACTGCC
CATCACAATTAGCAGCTCAACCAATGATGGCATGTCTATAAGCTGTTCGA
CCAATGAGAGAGTGGCTACATGTTCGTCATCTTTGTGATACATTTGCAAC
TTTATGTTTTTATTATGCATTGCTACGTTTTGACGGAGGTGGGCAGGGCT
ATGGGATCGGTCTATTCGCATGGCTCCATTACTTGAAATCAAAAGATCTC
ATTCCTCCATGAAATATTTCTGCATTGTGAATTTCTTTTTAATTCATTAT
TGCTAATTTCTCGCTGATACTGTCTAATGAATTTTCCAATTGGCTATCAT
AAGGCAGCTTGCATGCGTAAAGCAGGAACTTAAAAACAGGAAATGACATG
GCTTATTCTGGGACCTTTCCTGGACCTTTGACCAAACTTCCTGTCAGTGT
TGTCCCCAATGTGTCTAGTATGTGAAGGAAGTGTGGAAACTTAGACAGGC
AAATAAACACGCCAAAAACAATACCTCCCGTTTCACAGGAGGTAACAAGT
TAGAAATGCAGTTGTGGTTACTTGAATCTGGATGGCGATTTCCCAATTTT
ATCTCACACCTATTCCAGGTAAAACGCCGACCATGAATTCATCCACGAAT
ATTTTCATGCATTCTGTAGCAAATATTACATCATTAATTTCAATAACAAG
TATCAACCCTTTAACAAATATGGTTTCGTTAGTTTAGTAACGGTGCAAGT
CGTTTTAGTTAGATGCTGATGACAGGTGTGTAGACGTACGAATTTCCTAT
GTTTATGTTCTATCGTCCTGTAGGATGGAGACAGTTGACCTGAACGCTGC
GCTGAAGGCGATCCGTGAGCAGTATGAGGAGATAGCCCGCCGAAACAGAG
CTGACGTGGAGAAGTCCTTCCAGGACAAGGTGCCATCAACAAAACATCTT
AAGTCTTGTCATTTCTAGGTGTTTTCTTTCTTTTTTAACATAGGGTATCG
ATCAAAATTGTTGCACACGAAAAGTCATTGAAGGTTGGTGAGAAGCTGTT
AGAAGGTATCCGCCATCTTACTTCAGTTTTGACGTGTAGTCACGTGACCT
GGGAGCCAATGGTCACACGGATCACGTGATATATGGGTTTGCAGATGGAG
GGGGATAGACGGTTGGGGCCTTGGTCTCGGTTCAAGGATGGGGAGCATAA
ATGCTTTCTTGAAAAAGTACCATATACTAGTTTTCCTTTGTCTTGTTTCT
CATTCTAATTCTTGCCCTAAACTCCAGGTTTCCGCAGTGAAGGTTGAACA
GGCGCAGAGTAATGAAGCTCTGACTCTGGTCAAGTCGGAGATTAACGAAA
TCCGCCGAACTCTGACGGGACTGCAAGCCGAGCTGGAGGCTCTCAAGGCG
CAGGTATGAAGTACTGCTCATATTGATGCACGGGGAATTTGTTTTCTTTG
GTTATGAATGTATTTTAGTTTTCCCCAAGGACAAAGACGCCATTAAAATG
ATTCAGTAAAACACCATGGAGAAGTACAGGAGGTAACATCCACTACTAAA
CATAATTCCACCACCCTGAAAAGTTACATCCAAACAGATCGATCTCCAAC
CCAACGTCCCCCAGTATAATGACAAGTACAATGTGTTCTGGCTCTTATAA
GCCAGGTGCAAATTGCTCAAGACCCGGCTATATAGATACAAATACAACAT
TGTACATTTTGTCTATCCTTATCTTTCACTACAGCAAGCCGCCATCTTGG
ATTCCATCGCCAGCGCTGAGCGGGACACCGCCTTAGCCATGGAGGCTAAG
ATGGAGATCATCTCCAGCCTGACCGGCGAGGTGTCCCGTCTCAAGAACGA
CATGGAGCGCGTCTTGAAGGAGTACCAGGACCTCATGAACACCAAGCTGG
CTCTGGAGGCGGAGATCAACCAGTACAACAGTCTGCTGTCTGGGGAGGAG
ACCAGGTGAGTCTTTAAGAACTTTGCTTTTCGTCTTAATCAATAATCTCA
ACCAGTACATCATCTTGCTGTTTGGGGAGGAAACCACAGCTAGCTTGAAG
AACTTATCGCTTCGTCTTAATCAAGATTGTAATAGTGTAACACATTGTAA
TTGTGTAATAGTGTAACAGTGTAGCACATAGAGTAACACATATCGTAACA
CATACGGAAACTCAACCAATACAACACCTTGCTGTCTAGAGAAGTAAATT
ACTATAATTTAGGACGGGGGGAAAAGCTTGAGAATCCATGTACGCAGACT
GACACAGTACTGAAACGATGACTTTCAAGATCATAATGTCTAATAGAGAT
TGGTGTTCACCTATCGTATTTATCCACGCAACTACTTGCAATCAAGTCAT
GGCCAGAAACATCCACTAAGATAAATGTTTTATTGAAAGCAATACAGTAG
ATCGTAGTTTCTGTTCCAACTTTGTTTCGTATTCTTGCAGGATGACTCAG
TTCAGTGCCTAG Coding sequence (CDS) from alignment at Sc0000137:291357..295768- >transcript:BL95816_evm1 ID=transcript:BL95816_evm1|Name=transcript:BL95816_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4893bp|location=Sequence derived from alignment at Sc0000137:291357..295768- (Branchiostoma lanceolatum)
ATGGAGAGGATCGAGGGCGAGATCGAAAAGAGAGCTGTACTGGAAGATGA
GCTCAACATGCTGAAAAGGGAGCAGGAGGAGCTGGCTATGGAGAAGGTTG
ACCTTGAGGGTCAGATCGAGGGCGCGCAGGGCGAGTTGGACTTCATAAAA
CAGATCCACAAGCAGGAGGTGGCCGAGCTGAAGGAACGCATCAAGGCGTC
TGGGAACATTGAGATAGAGTCGAGGATGGAGACAGTTGACCTGAACGCTG
CGCTGAAGGCGATCCGTGAGCAGTATGAGGAGATAGCCCGCCGAAACAGA
GCTGACGTGGAGAAGTCCTTCCAGGACAAGGTTTCCGCAGTGAAGGTTGA
ACAGGCGCAGAGTAATGAAGCTCTGACTCTGGTCAAGTCGGAGATTAACG
AAATCCGCCGAACTCTGACGGGACTGCAAGCCGAGCTGGAGGCTCTCAAG
GCGCAGCAAGCCGCCATCTTGGATTCCATCGCCAGCGCTGAGCGGGACAC
CGCCTTAGCCATGGAGGCTAAGATGGAGATCATCTCCAGCCTGACCGGCG
AGGTGTCCCGTCTCAAGAACGACATGGAGCGCGTCTTGAAGGAGTACCAG
GACCTCATGAACACCAAGCTGGCTCTGGAGGCGGAGATCAACCAGTACAA
CAGTCTGCTGTCTGGGGAGGAGACCAGGATGACTCAGTTCAGTGCCTAGA
TGGAGAGGATCGAGGGCGAGATCGAAAAGAGAGCTGTACTGGAAGATGAG
CTCAACATGCTGAAAAGGGAGCAGGAGGAGCTGGCTATGGAGAAGGTTGA
CCTTGAGGGTCAGATCGAGGGCGCGCAGGGCGAGTTGGACTTCATAAAAC
AGATCCACAAGCAGGAGGTGGCCGAGCTGAAGGAACGCATCAAGGCGTCT
GGGAACATTGAGATAGAGTCGAGGATGGAGACAGTTGACCTGAACGCTGC
GCTGAAGGCGATCCGTGAGCAGTATGAGGAGATAGCCCGCCGAAACAGAG
CTGACGTGGAGAAGTCCTTCCAGGACAAGGTTTCCGCAGTGAAGGTTGAA
CAGGCGCAGAGTAATGAAGCTCTGACTCTGGTCAAGTCGGAGATTAACGA
AATCCGCCGAACTCTGACGGGACTGCAAGCCGAGCTGGAGGCTCTCAAGG
CGCAGCAAGCCGCCATCTTGGATTCCATCGCCAGCGCTGAGCGGGACACC
GCCTTAGCCATGGAGGCTAAGATGGAGATCATCTCCAGCCTGACCGGCGA
GGTGTCCCGTCTCAAGAACGACATGGAGCGCGTCTTGAAGGAGTACCAGG
ACCTCATGAACACCAAGCTGGCTCTGGAGGCGGAGATCAACCAGTACAAC
AGTCTGCTGTCTGGGGAGGAGACCAGGATGACTCAGTTCAGTGCCTAGAT
GGAGAGGATCGAGGGCGAGATCGAAAAGAGAGCTGTACTGGAAGATGAGC
TCAACATGCTGAAAAGGGAGCAGGAGGAGCTGGCTATGGAGAAGGTTGAC
CTTGAGGGTCAGATCGAGGGCGCGCAGGGCGAGTTGGACTTCATAAAACA
GATCCACAAGCAGGAGGTGGCCGAGCTGAAGGAACGCATCAAGGCGTCTG
GGAACATTGAGATAGAGTCGAGGATGGAGACAGTTGACCTGAACGCTGCG
CTGAAGGCGATCCGTGAGCAGTATGAGGAGATAGCCCGCCGAAACAGAGC
TGACGTGGAGAAGTCCTTCCAGGACAAGGTTTCCGCAGTGAAGGTTGAAC
AGGCGCAGAGTAATGAAGCTCTGACTCTGGTCAAGTCGGAGATTAACGAA
ATCCGCCGAACTCTGACGGGACTGCAAGCCGAGCTGGAGGCTCTCAAGGC
GCAGCAAGCCGCCATCTTGGATTCCATCGCCAGCGCTGAGCGGGACACCG
CCTTAGCCATGGAGGCTAAGATGGAGATCATCTCCAGCCTGACCGGCGAG
GTGTCCCGTCTCAAGAACGACATGGAGCGCGTCTTGAAGGAGTACCAGGA
CCTCATGAACACCAAGCTGGCTCTGGAGGCGGAGATCAACCAGTACAACA
GTCTGCTGTCTGGGGAGGAGACCAGGATGACTCAGTTCAGTGCCTAGATG
GAGAGGATCGAGGGCGAGATCGAAAAGAGAGCTGTACTGGAAGATGAGCT
CAACATGCTGAAAAGGGAGCAGGAGGAGCTGGCTATGGAGAAGGTTGACC
TTGAGGGTCAGATCGAGGGCGCGCAGGGCGAGTTGGACTTCATAAAACAG
ATCCACAAGCAGGAGGTGGCCGAGCTGAAGGAACGCATCAAGGCGTCTGG
GAACATTGAGATAGAGTCGAGGATGGAGACAGTTGACCTGAACGCTGCGC
TGAAGGCGATCCGTGAGCAGTATGAGGAGATAGCCCGCCGAAACAGAGCT
GACGTGGAGAAGTCCTTCCAGGACAAGGTTTCCGCAGTGAAGGTTGAACA
GGCGCAGAGTAATGAAGCTCTGACTCTGGTCAAGTCGGAGATTAACGAAA
TCCGCCGAACTCTGACGGGACTGCAAGCCGAGCTGGAGGCTCTCAAGGCG
CAGCAAGCCGCCATCTTGGATTCCATCGCCAGCGCTGAGCGGGACACCGC
CTTAGCCATGGAGGCTAAGATGGAGATCATCTCCAGCCTGACCGGCGAGG
TGTCCCGTCTCAAGAACGACATGGAGCGCGTCTTGAAGGAGTACCAGGAC
CTCATGAACACCAAGCTGGCTCTGGAGGCGGAGATCAACCAGTACAACAG
TCTGCTGTCTGGGGAGGAGACCAGGATGACTCAGTTCAGTGCCTAGATGG
AGAGGATCGAGGGCGAGATCGAAAAGAGAGCTGTACTGGAAGATGAGCTC
AACATGCTGAAAAGGGAGCAGGAGGAGCTGGCTATGGAGAAGGTTGACCT
TGAGGGTCAGATCGAGGGCGCGCAGGGCGAGTTGGACTTCATAAAACAGA
TCCACAAGCAGGAGGTGGCCGAGCTGAAGGAACGCATCAAGGCGTCTGGG
AACATTGAGATAGAGTCGAGGATGGAGACAGTTGACCTGAACGCTGCGCT
GAAGGCGATCCGTGAGCAGTATGAGGAGATAGCCCGCCGAAACAGAGCTG
ACGTGGAGAAGTCCTTCCAGGACAAGGTTTCCGCAGTGAAGGTTGAACAG
GCGCAGAGTAATGAAGCTCTGACTCTGGTCAAGTCGGAGATTAACGAAAT
CCGCCGAACTCTGACGGGACTGCAAGCCGAGCTGGAGGCTCTCAAGGCGC
AGCAAGCCGCCATCTTGGATTCCATCGCCAGCGCTGAGCGGGACACCGCC
TTAGCCATGGAGGCTAAGATGGAGATCATCTCCAGCCTGACCGGCGAGGT
GTCCCGTCTCAAGAACGACATGGAGCGCGTCTTGAAGGAGTACCAGGACC
TCATGAACACCAAGCTGGCTCTGGAGGCGGAGATCAACCAGTACAACAGT
CTGCTGTCTGGGGAGGAGACCAGGATGACTCAGTTCAGTGCCTAGATGGA
GAGGATCGAGGGCGAGATCGAAAAGAGAGCTGTACTGGAAGATGAGCTCA
ACATGCTGAAAAGGGAGCAGGAGGAGCTGGCTATGGAGAAGGTTGACCTT
GAGGGTCAGATCGAGGGCGCGCAGGGCGAGTTGGACTTCATAAAACAGAT
CCACAAGCAGGAGGTGGCCGAGCTGAAGGAACGCATCAAGGCGTCTGGGA
ACATTGAGATAGAGTCGAGGATGGAGACAGTTGACCTGAACGCTGCGCTG
AAGGCGATCCGTGAGCAGTATGAGGAGATAGCCCGCCGAAACAGAGCTGA
CGTGGAGAAGTCCTTCCAGGACAAGGTTTCCGCAGTGAAGGTTGAACAGG
CGCAGAGTAATGAAGCTCTGACTCTGGTCAAGTCGGAGATTAACGAAATC
CGCCGAACTCTGACGGGACTGCAAGCCGAGCTGGAGGCTCTCAAGGCGCA
GCAAGCCGCCATCTTGGATTCCATCGCCAGCGCTGAGCGGGACACCGCCT
TAGCCATGGAGGCTAAGATGGAGATCATCTCCAGCCTGACCGGCGAGGTG
TCCCGTCTCAAGAACGACATGGAGCGCGTCTTGAAGGAGTACCAGGACCT
CATGAACACCAAGCTGGCTCTGGAGGCGGAGATCAACCAGTACAACAGTC
TGCTGTCTGGGGAGGAGACCAGGATGACTCAGTTCAGTGCCTAGATGGAG
AGGATCGAGGGCGAGATCGAAAAGAGAGCTGTACTGGAAGATGAGCTCAA
CATGCTGAAAAGGGAGCAGGAGGAGCTGGCTATGGAGAAGGTTGACCTTG
AGGGTCAGATCGAGGGCGCGCAGGGCGAGTTGGACTTCATAAAACAGATC
CACAAGCAGGAGGTGGCCGAGCTGAAGGAACGCATCAAGGCGTCTGGGAA
CATTGAGATAGAGTCGAGGATGGAGACAGTTGACCTGAACGCTGCGCTGA
AGGCGATCCGTGAGCAGTATGAGGAGATAGCCCGCCGAAACAGAGCTGAC
GTGGAGAAGTCCTTCCAGGACAAGGTTTCCGCAGTGAAGGTTGAACAGGC
GCAGAGTAATGAAGCTCTGACTCTGGTCAAGTCGGAGATTAACGAAATCC
GCCGAACTCTGACGGGACTGCAAGCCGAGCTGGAGGCTCTCAAGGCGCAG
CAAGCCGCCATCTTGGATTCCATCGCCAGCGCTGAGCGGGACACCGCCTT
AGCCATGGAGGCTAAGATGGAGATCATCTCCAGCCTGACCGGCGAGGTGT
CCCGTCTCAAGAACGACATGGAGCGCGTCTTGAAGGAGTACCAGGACCTC
ATGAACACCAAGCTGGCTCTGGAGGCGGAGATCAACCAGTACAACAGTCT
GCTGTCTGGGGAGGAGACCAGGATGACTCAGTTCAGTGCCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000137 | genome | Sc0000137:291357..295768 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95816_evm1 |
| Biotype | protein_coding |
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