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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95813_evm0 >transcript:BL95813_evm0-protein ID=transcript:BL95813_evm0-protein|Name=transcript:BL95813_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=289bp
MMAQHFLVPLLALVISNTAHGATTEAPTPATMHMGHTMQHTMGHGTHHPG
MNHTGMDHTMDHGTHHHGTHHPGMNHTGMDHTMDHGTHHHGTHHPGMHHT
GMDHTMDHGTHHPGMHHTMDHSGMDHGSGHSSYFYFGHHEVVVLFLEWTI
NTVPALIGSCVGVFAIAMLYEGLKVWREMLIVRAQDSKKAASNSYSMANL
TNGKSTSTLDVEIVPKATEPRTRDQICSCMHALQSLLHIVQVLISYGLML
VFMTFNVWLCLSVALGAGAGYFAFGWRRPITVDRNEHCH Run BLAST on NCBI mRNA from alignment at Sc0000135:181682..183858- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95813_evm0 ID=transcript:BL95813_evm0|Name=transcript:BL95813_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2177bp|location=Sequence derived from alignment at Sc0000135:181682..183858- (Branchiostoma lanceolatum)
ATGATGGCGCAACATTTCCTAGTGCCTCTTCTGGCTCTAGTCATCAGTAA
TACCGCCCACGGGGCTACCACAGAGGTACGTATTTGATGACGTCAAACCT
TTCAATCGTGCAGCTAGAAGCTTAATTTCCTTTTCTATCTGTGCCCCGAT
ATACCAGTAAGGCTAAATTACATACGAAATGGTACAGGAAATGACGTTAT
TCTACTCAATGTCTTTATTTTGCGTCAGCAAACGTTGTACAAAAATAAAC
CCTTAAAACTTGTCACGTGTTCTGGGTCGCCGTAGGCACTTCAGAGGAAT
TAGAATCTATCAGCTGAATGTGTCCATGCTTATTCATTGTTTATGAGACT
GAAAATGCATTGGTGAAACAAGTCATTTGATGTTACGTTCAGGAATATGG
TGGACAAAATCACTTTGTTGTTGTTGTAATCGTTGTCTGTTATATCGTCT
GAATCCCTATTTCACTGCATTTTATAATCAACAGGCTCCTACCCCTGCAA
CTATGCACATGGGACACACCATGCAGCACACCATGGGCCACGGAACACAC
CACCCCGGCATGAACCACACCGGAATGGACCACACCATGGACCACGGAAC
TCACCACCACGGAACTCACCACCCCGGCATGAACCACACCGGAATGGACC
ACACCATGGACCACGGTACTCACCACCACGGTACTCACCACCCCGGAATG
CACCACACCGGAATGGACCATACTATGGACCACGGAACTCACCACCCCGG
CATGCACCATACCATGGACCACTCCGGCATGGACCATGGATCGGTAAGAA
AATAGCATCTACGGTACAAGGAAGAATAGCAGATTGAGTTTTGGACATTA
AAAGAAGAAGAAAAGCTGGTGACTTCATAATTCACATTCCTCTAAAAGAG
GACATAATGGACGAAAATGGTAATTCTGACTGCGCAGTAGAAGCAGGTGA
TAGGAAGATAAAGAATGCTATATCTAAGTCACTATTTTAAACAAATATTT
TGTACTTTACTTACAGGGACATAGCTCGTATTTCTACTTCGGTCACCACG
AGGTTGTTGTGTTGTTCCTGGAGTGGACGATCAACACCGTACCAGGTAAA
GTTTGGACTCACTTCGTTTCAACAGTTTCCTCACTAGTAAAATTGCTAGT
CACTATTTTTGAGATATTATAACTAAAAACACAGATGATGGCTTTCTCCG
AATTCAGCCTATTGTATTGGTTGTTTGGTTAGGCAGCAAGGAGAAGGTTA
TCACAGAATGTAACAGAAATTTGACAGAATTATATTATAGATAAAATACT
CATTCACTCTTCAAGCAGCTAGTGTATTTGGTATCTGCCAGATTAGAGAG
TGTCTTCTTTTTGTACTTTTGTTAAGCTAAAGCTATTTCGTCACTTCTCA
AGCATTAGAAATAAACTCAAAACAGTCCTAAGTCTGCCTGTTTTTTCATG
GCACAGCTCTGATTGGCTCCTGTGTCGGAGTGTTCGCCATCGCTATGCTG
TACGAGGGTCTGAAGGTTTGGCGGGAAATGTTGATCGTGCGGGCACAGGA
CAGTAAGAAGGCGGCCTCCAACTCATACAGCATGGCCAATCTTACAAACG
GGAAAAGTACGAGCACGCTGGACGTCGAAATCGTCCCAAAGGCAACAGAA
CCGAGGACAAGGTGAGCATCATAACGCTGTTCTCGAATCTGCTTAACCAT
CTTCAGCTGAATGTGAAGACATCTCAAGTTCACGTTGGTTTCAAAGCAAT
TTTAAGAACAGTTTCGCTTTTCAGAATTAGAACTAGACTGGAGTGCCATA
TTACACTATATGTAACGGATTGCATCTGATCATTAGCTTTGTGTTAGTCA
AGTTTTCTGCAGTATTCATCCCGTTTTTAATCATATTGTTGCACAGGGAT
TAGATAGTACGCGTAATGCAGTCTCTCCTGCTTTATCCAATGTTCAAAGC
ATGTTTTTATTGTTATTTTCTACAGGGATCAGATCTGTAGCTGCATGCAC
GCACTTCAGTCTCTCCTGCACATCGTCCAGGTTCTGATCAGCTACGGGCT
GATGTTGGTCTTCATGACGTTTAACGTGTGGCTGTGTCTGTCCGTGGCGC
TCGGGGCAGGGGCCGGATACTTCGCCTTCGGCTGGCGCAGGCCCATCACC
GTGGACAGGAACGAACACTGTCATTAA Coding sequence (CDS) from alignment at Sc0000135:181682..183858- >transcript:BL95813_evm0 ID=transcript:BL95813_evm0|Name=transcript:BL95813_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4350bp|location=Sequence derived from alignment at Sc0000135:181682..183858- (Branchiostoma lanceolatum)
ATGATGGCGCAACATTTCCTAGTGCCTCTTCTGGCTCTAGTCATCAGTAA
TACCGCCCACGGGGCTACCACAGAGGCTCCTACCCCTGCAACTATGCACA
TGGGACACACCATGCAGCACACCATGGGCCACGGAACACACCACCCCGGC
ATGAACCACACCGGAATGGACCACACCATGGACCACGGAACTCACCACCA
CGGAACTCACCACCCCGGCATGAACCACACCGGAATGGACCACACCATGG
ACCACGGTACTCACCACCACGGTACTCACCACCCCGGAATGCACCACACC
GGAATGGACCATACTATGGACCACGGAACTCACCACCCCGGCATGCACCA
TACCATGGACCACTCCGGCATGGACCATGGATCGGGACATAGCTCGTATT
TCTACTTCGGTCACCACGAGGTTGTTGTGTTGTTCCTGGAGTGGACGATC
AACACCGTACCAGCTCTGATTGGCTCCTGTGTCGGAGTGTTCGCCATCGC
TATGCTGTACGAGGGTCTGAAGGTTTGGCGGGAAATGTTGATCGTGCGGG
CACAGGACAGTAAGAAGGCGGCCTCCAACTCATACAGCATGGCCAATCTT
ACAAACGGGAAAAGTACGAGCACGCTGGACGTCGAAATCGTCCCAAAGGC
AACAGAACCGAGGACAAGGGATCAGATCTGTAGCTGCATGCACGCACTTC
AGTCTCTCCTGCACATCGTCCAGGTTCTGATCAGCTACGGGCTGATGTTG
GTCTTCATGACGTTTAACGTGTGGCTGTGTCTGTCCGTGGCGCTCGGGGC
AGGGGCCGGATACTTCGCCTTCGGCTGGCGCAGGCCCATCACCGTGGACA
GGAACGAACACTGTCATTAAATGATGGCGCAACATTTCCTAGTGCCTCTT
CTGGCTCTAGTCATCAGTAATACCGCCCACGGGGCTACCACAGAGGCTCC
TACCCCTGCAACTATGCACATGGGACACACCATGCAGCACACCATGGGCC
ACGGAACACACCACCCCGGCATGAACCACACCGGAATGGACCACACCATG
GACCACGGAACTCACCACCACGGAACTCACCACCCCGGCATGAACCACAC
CGGAATGGACCACACCATGGACCACGGTACTCACCACCACGGTACTCACC
ACCCCGGAATGCACCACACCGGAATGGACCATACTATGGACCACGGAACT
CACCACCCCGGCATGCACCATACCATGGACCACTCCGGCATGGACCATGG
ATCGGGACATAGCTCGTATTTCTACTTCGGTCACCACGAGGTTGTTGTGT
TGTTCCTGGAGTGGACGATCAACACCGTACCAGCTCTGATTGGCTCCTGT
GTCGGAGTGTTCGCCATCGCTATGCTGTACGAGGGTCTGAAGGTTTGGCG
GGAAATGTTGATCGTGCGGGCACAGGACAGTAAGAAGGCGGCCTCCAACT
CATACAGCATGGCCAATCTTACAAACGGGAAAAGTACGAGCACGCTGGAC
GTCGAAATCGTCCCAAAGGCAACAGAACCGAGGACAAGGGATCAGATCTG
TAGCTGCATGCACGCACTTCAGTCTCTCCTGCACATCGTCCAGGTTCTGA
TCAGCTACGGGCTGATGTTGGTCTTCATGACGTTTAACGTGTGGCTGTGT
CTGTCCGTGGCGCTCGGGGCAGGGGCCGGATACTTCGCCTTCGGCTGGCG
CAGGCCCATCACCGTGGACAGGAACGAACACTGTCATTAAATGATGGCGC
AACATTTCCTAGTGCCTCTTCTGGCTCTAGTCATCAGTAATACCGCCCAC
GGGGCTACCACAGAGGCTCCTACCCCTGCAACTATGCACATGGGACACAC
CATGCAGCACACCATGGGCCACGGAACACACCACCCCGGCATGAACCACA
CCGGAATGGACCACACCATGGACCACGGAACTCACCACCACGGAACTCAC
CACCCCGGCATGAACCACACCGGAATGGACCACACCATGGACCACGGTAC
TCACCACCACGGTACTCACCACCCCGGAATGCACCACACCGGAATGGACC
ATACTATGGACCACGGAACTCACCACCCCGGCATGCACCATACCATGGAC
CACTCCGGCATGGACCATGGATCGGGACATAGCTCGTATTTCTACTTCGG
TCACCACGAGGTTGTTGTGTTGTTCCTGGAGTGGACGATCAACACCGTAC
CAGCTCTGATTGGCTCCTGTGTCGGAGTGTTCGCCATCGCTATGCTGTAC
GAGGGTCTGAAGGTTTGGCGGGAAATGTTGATCGTGCGGGCACAGGACAG
TAAGAAGGCGGCCTCCAACTCATACAGCATGGCCAATCTTACAAACGGGA
AAAGTACGAGCACGCTGGACGTCGAAATCGTCCCAAAGGCAACAGAACCG
AGGACAAGGGATCAGATCTGTAGCTGCATGCACGCACTTCAGTCTCTCCT
GCACATCGTCCAGGTTCTGATCAGCTACGGGCTGATGTTGGTCTTCATGA
CGTTTAACGTGTGGCTGTGTCTGTCCGTGGCGCTCGGGGCAGGGGCCGGA
TACTTCGCCTTCGGCTGGCGCAGGCCCATCACCGTGGACAGGAACGAACA
CTGTCATTAAATGATGGCGCAACATTTCCTAGTGCCTCTTCTGGCTCTAG
TCATCAGTAATACCGCCCACGGGGCTACCACAGAGGCTCCTACCCCTGCA
ACTATGCACATGGGACACACCATGCAGCACACCATGGGCCACGGAACACA
CCACCCCGGCATGAACCACACCGGAATGGACCACACCATGGACCACGGAA
CTCACCACCACGGAACTCACCACCCCGGCATGAACCACACCGGAATGGAC
CACACCATGGACCACGGTACTCACCACCACGGTACTCACCACCCCGGAAT
GCACCACACCGGAATGGACCATACTATGGACCACGGAACTCACCACCCCG
GCATGCACCATACCATGGACCACTCCGGCATGGACCATGGATCGGGACAT
AGCTCGTATTTCTACTTCGGTCACCACGAGGTTGTTGTGTTGTTCCTGGA
GTGGACGATCAACACCGTACCAGCTCTGATTGGCTCCTGTGTCGGAGTGT
TCGCCATCGCTATGCTGTACGAGGGTCTGAAGGTTTGGCGGGAAATGTTG
ATCGTGCGGGCACAGGACAGTAAGAAGGCGGCCTCCAACTCATACAGCAT
GGCCAATCTTACAAACGGGAAAAGTACGAGCACGCTGGACGTCGAAATCG
TCCCAAAGGCAACAGAACCGAGGACAAGGGATCAGATCTGTAGCTGCATG
CACGCACTTCAGTCTCTCCTGCACATCGTCCAGGTTCTGATCAGCTACGG
GCTGATGTTGGTCTTCATGACGTTTAACGTGTGGCTGTGTCTGTCCGTGG
CGCTCGGGGCAGGGGCCGGATACTTCGCCTTCGGCTGGCGCAGGCCCATC
ACCGTGGACAGGAACGAACACTGTCATTAAATGATGGCGCAACATTTCCT
AGTGCCTCTTCTGGCTCTAGTCATCAGTAATACCGCCCACGGGGCTACCA
CAGAGGCTCCTACCCCTGCAACTATGCACATGGGACACACCATGCAGCAC
ACCATGGGCCACGGAACACACCACCCCGGCATGAACCACACCGGAATGGA
CCACACCATGGACCACGGAACTCACCACCACGGAACTCACCACCCCGGCA
TGAACCACACCGGAATGGACCACACCATGGACCACGGTACTCACCACCAC
GGTACTCACCACCCCGGAATGCACCACACCGGAATGGACCATACTATGGA
CCACGGAACTCACCACCCCGGCATGCACCATACCATGGACCACTCCGGCA
TGGACCATGGATCGGGACATAGCTCGTATTTCTACTTCGGTCACCACGAG
GTTGTTGTGTTGTTCCTGGAGTGGACGATCAACACCGTACCAGCTCTGAT
TGGCTCCTGTGTCGGAGTGTTCGCCATCGCTATGCTGTACGAGGGTCTGA
AGGTTTGGCGGGAAATGTTGATCGTGCGGGCACAGGACAGTAAGAAGGCG
GCCTCCAACTCATACAGCATGGCCAATCTTACAAACGGGAAAAGTACGAG
CACGCTGGACGTCGAAATCGTCCCAAAGGCAACAGAACCGAGGACAAGGG
ATCAGATCTGTAGCTGCATGCACGCACTTCAGTCTCTCCTGCACATCGTC
CAGGTTCTGATCAGCTACGGGCTGATGTTGGTCTTCATGACGTTTAACGT
GTGGCTGTGTCTGTCCGTGGCGCTCGGGGCAGGGGCCGGATACTTCGCCT
TCGGCTGGCGCAGGCCCATCACCGTGGACAGGAACGAACACTGTCATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000135 | genome | Sc0000135:181682..183858 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95813_evm0 |
| Biotype | protein_coding |
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