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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95801_evm1 >transcript:BL95801_evm1-protein ID=transcript:BL95801_evm1-protein|Name=transcript:BL95801_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=278bp
MRSANFCCVSLVSPGSSCGVQPIHPSFPPPLNRIVGGEGAVPNSWPWQAF
LKHREGEFLCGGTLISPLWVVTAAHCVHDFNNRNVWQLNVVLGKHHFHEI
DETEQQLIHSRRRPRLIKHENYTRIGRIANVDIALLKLSQPATLNRYVRT
ACLPNGTDDNPPPGTMCVVTGWGDNHLGYVDILKQARVPLVSDEDCKTAY
PDNDTHPITEYMLCAGHPEGGHGPCHGDSGGPLVCFRRGTWVLDGITSWG
DFACSRQGKHGVYTRVTSVLEWIKQNIN Run BLAST on NCBI mRNA from alignment at Sc0000130:551694..554625+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95801_evm1 ID=transcript:BL95801_evm1|Name=transcript:BL95801_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2932bp|location=Sequence derived from alignment at Sc0000130:551694..554625+ (Branchiostoma lanceolatum)
ATGAGGTCTGCGAACTTTTGCTGTGTCTCGTTAGTTAGCCCGGGTTCATC
CTGCGGAGTTCAGCCCATCCACCCTTCCTTCCCGCCGCCGCTGAACCGGA
TCGTGGGCGGTGAAGGTGCCGTGCCCAACAGTTGGCCCTGGCAGGCATTC
CTTAAGCACCGGGAAGGCGAGTTCCTTTGCGGCGGGACCCTCATCAGTCC
ATTGTGGGTCGTTACGGCTGCACACTGTGTGCACGACTTCAATAACAGGT
ACATTAAACTTGCATAAAACATCAATGACATCAAAGTCAACCATAATACT
ATTGTTTAATAACATAAAAAATTTCACAAAAAATTCACACTTCGGATGTT
ATTGAACCTCGAACCATCAAAACATCATACCTCCAGCTTTTGATTATTCC
CACCAGGTAATTACATTAATCAGTGACTTGCCCACTCATGACGTGTTCAT
TGTGACGTCATGAGTGGGCATTAGTCACCGATTAATGTAATCACCTGTTG
AGAAGATCTCTAGATCTGATAATAATAAAGAGCTGGAAGTATGGTTTCTG
ATGGTTCAATGTTAGATAACATCAGTTGGCTGTGTATTTGTTTTAAACGT
TTATATTCCTTCAATGATGCTATTCCTTTTTCAGATAATAAGAAAATGTT
GTATTTTGGTGTCTTATGCACTTTAAGGGGCCATAAAGTAACGGGCTGAT
TGCGGCTGCAGGATGTTCTGACCACTTCAGCAACAGAACACAGTGGACTA
CTACTACTACTAAAGTAACGGGCGATGGTACGGGGGGGGGGGTGCATCAA
TATAAAGAAGATCACAAGGAATGGGGACTGTAACGAACGAGATGTCCTGA
CGGTGGCTCTAACGATTAGCCATAAATATACCTCGAATATTTCAACAAAC
TCGCATACTACTGTTTATACGCTTGCTCTGGGTTCGTTTGGAGATCTCTC
TGGAAGTGTCCAATGGAGCCAACATCTCGAGATTGACAGTGCAATAATCT
GTGACTTTTTTCTTCTTCTTGCAATCCCAGCCCGGATTCCTATATGCTAT
ATTGTCGTCTTGTCTCTACCTACGTCTGCCTACCCGCGCACCGCAGTAAT
ATTTTCCATGGCCATACACCATAGAGTCTCATTTGCAGGCGAGGAGGGGA
GATGTTAACCTTACCGTTATTCCCTCTTTCGCCGAATTTATGATCCCTTA
TCCTCATAGGAACGTGTGGCAGCTAAATGTCGTCCTGGGCAAGCACCACT
TCCATGAAATAGACGAGACAGAGCAACAACTGATTCACTCACGGCGGGTA
ACATATCTACATGTAACATTATCACTCAATGCCATGGTCACATTTCTAAA
CCGGGGCCTGGCAGCTAGGGTTGTTTGCGGGAACGAAAAAGAAAAAGATC
ATCCTGCCAGCAATGCAATTGCTTCTACTGCTGACAGGATCATCCTGTCA
GTAGCCACTTCCAAAATGCCTAAGTTGCCTTTTCCTAGTATTACAGCTTG
TCTTGTGTATTTTTTCTGGTTTCTCCTCTGTCCTATAATCCTCTTCATTC
ATATTCATGTTATGTGCTTCCAAAGAGACCTCGGTTGATCAAACACGAGA
ACTACACCCGCATCGGGAGAATTGCCAACGTTGACATTGCCCTGTTGAAG
CTGAGCCAACCAGCTACCTTGAACCGGTACGTGAGGACAGCCTGTCTGCC
GAACGGCACAGACGACAACCCTCCACCGGGAACCATGTGTGTCGTCACGG
GGTGGGGAGACAACCGTAAGTCAATTACATTCAACCCTTCTTATCCTCAA
GGCTGAAAGCTGTCCGTTAATTTTAAACAATCCGGGGACTACGCCATTGC
TTCGATTTATGTCACGATATTTCTTGCTAGACTTGGAAATTTAGAAACTT
TAGAAAATTTGACTCACCGGAATTTCTGAGCGCAATTGAAGGTGTTAAAC
TTCATCTCTTCAGTCCCTTCGCCTTTTGGTCATGAAAATTAACTTTACAA
ACTGATAGATCTAGATGTACAGAACAAAGTGGAAACAACAACTCAAATGC
GGTTGGTTTGAGTGGATGACATTTACATAAGACCAGGGAAGTTAACAGCC
CACAACTCGGCCGTCATTGGCTAATTGTCGGTGACGTTCGTTGACCATGG
ACCTAGGAATAGCCTGAGAAGGAGGTTAAGTAGGAATACTTAGACAAACT
TTGAAACAAAGCTACCTTTAAACCACTGCCTTACAGATCTTGGATATGTC
GACATTTTGAAGCAAGCTCGCGTGCCGTTGGTCAGCGACGAGGACTGTAA
GACTGCCTACCCTGATAATGATACCCATCCGATTACTGAATACATGTTGT
GTGCAGGCCACCCAGAAGGAGGTCATGGTCCCTGTCATGTACGTATATAT
CTTTTACATTCGGAGTAAGGTGAGGGGTTCCACCAAAGGACAATACAGCA
ACAACACAACAGGTCTCCAACCGATGCAAAGTAAACCAATGGCATTTACG
ATAAAGACTCTTTGCACACAACTTAGCGTTTTATTCAACCGTCGTTTCGG
TGACCGCCTGTCACCTTCTTCAGGGCAATACTAACTGGTTCAATTTGCAC
AGCAGCCACCGGTGTCGCTGCTTACGGATGCGGTCCCAAAAGTAGAGTAT
TTATATGTATACAATGATAGGTAATGCACTATTTATGTGGTGGAGTGTAT
TAACATATACATAAATGATGTTGAGTAAAAATAACAGTGCAACAATTATC
ATCTACTTACGATGTCGTTGTAGGGTGACTCCGGTGGACCGTTGGTGTGT
TTCCGCAGAGGGACCTGGGTACTGGACGGCATCACGAGCTGGGGGGACTT
TGCCTGCAGCAGGCAAGGAAAGCACGGGGTTTACACCCGTGTTACCTCGG
TCCTCGAATGGATCAAGCAGAACATCAATTAG Coding sequence (CDS) from alignment at Sc0000130:551694..554625+ >transcript:BL95801_evm1 ID=transcript:BL95801_evm1|Name=transcript:BL95801_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4185bp|location=Sequence derived from alignment at Sc0000130:551694..554625+ (Branchiostoma lanceolatum)
ATGAGGTCTGCGAACTTTTGCTGTGTCTCGTTAGTTAGCCCGGGTTCATC
CTGCGGAGTTCAGCCCATCCACCCTTCCTTCCCGCCGCCGCTGAACCGGA
TCGTGGGCGGTGAAGGTGCCGTGCCCAACAGTTGGCCCTGGCAGGCATTC
CTTAAGCACCGGGAAGGCGAGTTCCTTTGCGGCGGGACCCTCATCAGTCC
ATTGTGGGTCGTTACGGCTGCACACTGTGTGCACGACTTCAATAACAGGA
ACGTGTGGCAGCTAAATGTCGTCCTGGGCAAGCACCACTTCCATGAAATA
GACGAGACAGAGCAACAACTGATTCACTCACGGCGGAGACCTCGGTTGAT
CAAACACGAGAACTACACCCGCATCGGGAGAATTGCCAACGTTGACATTG
CCCTGTTGAAGCTGAGCCAACCAGCTACCTTGAACCGGTACGTGAGGACA
GCCTGTCTGCCGAACGGCACAGACGACAACCCTCCACCGGGAACCATGTG
TGTCGTCACGGGGTGGGGAGACAACCATCTTGGATATGTCGACATTTTGA
AGCAAGCTCGCGTGCCGTTGGTCAGCGACGAGGACTGTAAGACTGCCTAC
CCTGATAATGATACCCATCCGATTACTGAATACATGTTGTGTGCAGGCCA
CCCAGAAGGAGGTCATGGTCCCTGTCATGGTGACTCCGGTGGACCGTTGG
TGTGTTTCCGCAGAGGGACCTGGGTACTGGACGGCATCACGAGCTGGGGG
GACTTTGCCTGCAGCAGGCAAGGAAAGCACGGGGTTTACACCCGTGTTAC
CTCGGTCCTCGAATGGATCAAGCAGAACATCAATTAGATGAGGTCTGCGA
ACTTTTGCTGTGTCTCGTTAGTTAGCCCGGGTTCATCCTGCGGAGTTCAG
CCCATCCACCCTTCCTTCCCGCCGCCGCTGAACCGGATCGTGGGCGGTGA
AGGTGCCGTGCCCAACAGTTGGCCCTGGCAGGCATTCCTTAAGCACCGGG
AAGGCGAGTTCCTTTGCGGCGGGACCCTCATCAGTCCATTGTGGGTCGTT
ACGGCTGCACACTGTGTGCACGACTTCAATAACAGGAACGTGTGGCAGCT
AAATGTCGTCCTGGGCAAGCACCACTTCCATGAAATAGACGAGACAGAGC
AACAACTGATTCACTCACGGCGGAGACCTCGGTTGATCAAACACGAGAAC
TACACCCGCATCGGGAGAATTGCCAACGTTGACATTGCCCTGTTGAAGCT
GAGCCAACCAGCTACCTTGAACCGGTACGTGAGGACAGCCTGTCTGCCGA
ACGGCACAGACGACAACCCTCCACCGGGAACCATGTGTGTCGTCACGGGG
TGGGGAGACAACCATCTTGGATATGTCGACATTTTGAAGCAAGCTCGCGT
GCCGTTGGTCAGCGACGAGGACTGTAAGACTGCCTACCCTGATAATGATA
CCCATCCGATTACTGAATACATGTTGTGTGCAGGCCACCCAGAAGGAGGT
CATGGTCCCTGTCATGGTGACTCCGGTGGACCGTTGGTGTGTTTCCGCAG
AGGGACCTGGGTACTGGACGGCATCACGAGCTGGGGGGACTTTGCCTGCA
GCAGGCAAGGAAAGCACGGGGTTTACACCCGTGTTACCTCGGTCCTCGAA
TGGATCAAGCAGAACATCAATTAGATGAGGTCTGCGAACTTTTGCTGTGT
CTCGTTAGTTAGCCCGGGTTCATCCTGCGGAGTTCAGCCCATCCACCCTT
CCTTCCCGCCGCCGCTGAACCGGATCGTGGGCGGTGAAGGTGCCGTGCCC
AACAGTTGGCCCTGGCAGGCATTCCTTAAGCACCGGGAAGGCGAGTTCCT
TTGCGGCGGGACCCTCATCAGTCCATTGTGGGTCGTTACGGCTGCACACT
GTGTGCACGACTTCAATAACAGGAACGTGTGGCAGCTAAATGTCGTCCTG
GGCAAGCACCACTTCCATGAAATAGACGAGACAGAGCAACAACTGATTCA
CTCACGGCGGAGACCTCGGTTGATCAAACACGAGAACTACACCCGCATCG
GGAGAATTGCCAACGTTGACATTGCCCTGTTGAAGCTGAGCCAACCAGCT
ACCTTGAACCGGTACGTGAGGACAGCCTGTCTGCCGAACGGCACAGACGA
CAACCCTCCACCGGGAACCATGTGTGTCGTCACGGGGTGGGGAGACAACC
ATCTTGGATATGTCGACATTTTGAAGCAAGCTCGCGTGCCGTTGGTCAGC
GACGAGGACTGTAAGACTGCCTACCCTGATAATGATACCCATCCGATTAC
TGAATACATGTTGTGTGCAGGCCACCCAGAAGGAGGTCATGGTCCCTGTC
ATGGTGACTCCGGTGGACCGTTGGTGTGTTTCCGCAGAGGGACCTGGGTA
CTGGACGGCATCACGAGCTGGGGGGACTTTGCCTGCAGCAGGCAAGGAAA
GCACGGGGTTTACACCCGTGTTACCTCGGTCCTCGAATGGATCAAGCAGA
ACATCAATTAGATGAGGTCTGCGAACTTTTGCTGTGTCTCGTTAGTTAGC
CCGGGTTCATCCTGCGGAGTTCAGCCCATCCACCCTTCCTTCCCGCCGCC
GCTGAACCGGATCGTGGGCGGTGAAGGTGCCGTGCCCAACAGTTGGCCCT
GGCAGGCATTCCTTAAGCACCGGGAAGGCGAGTTCCTTTGCGGCGGGACC
CTCATCAGTCCATTGTGGGTCGTTACGGCTGCACACTGTGTGCACGACTT
CAATAACAGGAACGTGTGGCAGCTAAATGTCGTCCTGGGCAAGCACCACT
TCCATGAAATAGACGAGACAGAGCAACAACTGATTCACTCACGGCGGAGA
CCTCGGTTGATCAAACACGAGAACTACACCCGCATCGGGAGAATTGCCAA
CGTTGACATTGCCCTGTTGAAGCTGAGCCAACCAGCTACCTTGAACCGGT
ACGTGAGGACAGCCTGTCTGCCGAACGGCACAGACGACAACCCTCCACCG
GGAACCATGTGTGTCGTCACGGGGTGGGGAGACAACCATCTTGGATATGT
CGACATTTTGAAGCAAGCTCGCGTGCCGTTGGTCAGCGACGAGGACTGTA
AGACTGCCTACCCTGATAATGATACCCATCCGATTACTGAATACATGTTG
TGTGCAGGCCACCCAGAAGGAGGTCATGGTCCCTGTCATGGTGACTCCGG
TGGACCGTTGGTGTGTTTCCGCAGAGGGACCTGGGTACTGGACGGCATCA
CGAGCTGGGGGGACTTTGCCTGCAGCAGGCAAGGAAAGCACGGGGTTTAC
ACCCGTGTTACCTCGGTCCTCGAATGGATCAAGCAGAACATCAATTAGAT
GAGGTCTGCGAACTTTTGCTGTGTCTCGTTAGTTAGCCCGGGTTCATCCT
GCGGAGTTCAGCCCATCCACCCTTCCTTCCCGCCGCCGCTGAACCGGATC
GTGGGCGGTGAAGGTGCCGTGCCCAACAGTTGGCCCTGGCAGGCATTCCT
TAAGCACCGGGAAGGCGAGTTCCTTTGCGGCGGGACCCTCATCAGTCCAT
TGTGGGTCGTTACGGCTGCACACTGTGTGCACGACTTCAATAACAGGAAC
GTGTGGCAGCTAAATGTCGTCCTGGGCAAGCACCACTTCCATGAAATAGA
CGAGACAGAGCAACAACTGATTCACTCACGGCGGAGACCTCGGTTGATCA
AACACGAGAACTACACCCGCATCGGGAGAATTGCCAACGTTGACATTGCC
CTGTTGAAGCTGAGCCAACCAGCTACCTTGAACCGGTACGTGAGGACAGC
CTGTCTGCCGAACGGCACAGACGACAACCCTCCACCGGGAACCATGTGTG
TCGTCACGGGGTGGGGAGACAACCATCTTGGATATGTCGACATTTTGAAG
CAAGCTCGCGTGCCGTTGGTCAGCGACGAGGACTGTAAGACTGCCTACCC
TGATAATGATACCCATCCGATTACTGAATACATGTTGTGTGCAGGCCACC
CAGAAGGAGGTCATGGTCCCTGTCATGGTGACTCCGGTGGACCGTTGGTG
TGTTTCCGCAGAGGGACCTGGGTACTGGACGGCATCACGAGCTGGGGGGA
CTTTGCCTGCAGCAGGCAAGGAAAGCACGGGGTTTACACCCGTGTTACCT
CGGTCCTCGAATGGATCAAGCAGAACATCAATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000130 | genome | Sc0000130:551694..554625 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95801_evm1 |
| Biotype | protein_coding |
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