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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95781_evm1 >transcript:BL95781_evm1-protein ID=transcript:BL95781_evm1-protein|Name=transcript:BL95781_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=206bp
MPQLSLFVAAMVYVIGGYDGQRCLEDVERYDPDKDKWERLAPLVHAVKCP
AVAAYDRRIYVFGGFYDGYNISRQLQCYDPHTNSWSVVESNMIDYTCAHA
VRLDNRIYLLGGSSKTVKAYDPSDDSIVRVADMNIKRDNCGVSVVGGKIY
VSGGVTESNGPALDCIECYDPKKDEWTFGHKLPCQLYRHGFVTVQMYKED
IHAGQN Run BLAST on NCBI mRNA from alignment at Sc0000120:797351..799788- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95781_evm1 ID=transcript:BL95781_evm1|Name=transcript:BL95781_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2438bp|location=Sequence derived from alignment at Sc0000120:797351..799788- (Branchiostoma lanceolatum)
ATGCCTCAATTAAGCCTTTTTGTGGCTGCCATGGTATGGTATTTGATTAT
GATCTTATTGTTATTTTGTCAATAAACCATTCCTTCATTCATTCATTCAT
CCATTCCNTCATTCATGCATTCATTCCAGGTGTACGTCATTGGCGGGTAC
GACGGCCAGCGGTGCCTGGAGGACGTGGAGCGGTACGACCCCGACAAGGA
CAAGTGGGAGCGGCTCGCTCCGCTGGTGCACGCCGTCAAGTGCCCCGCCG
TGGCCGCCTACGACCGCAGGTGCGATACCGGCACTGACTAGACTCCTTGT
CGGACTACCGTACTATAGCCTCCATAGCAGGATCTACCGGCCTTTTAAGG
GGGGCTTATAATACACTTTTTGCAGCCAGCCCGTAACCATCAGCCAGCCT
GTAACCATTTTACCGGCAAAATGGTTACAGGCTGGCTGGAGGCTAACAGA
ACTAATGCTTTGGTCCCATTTTCAATCCGGGGCCCGGCCGGACTGTTTGC
GAAAACGAAAAACAGAATATGCATATCAAGGAAATACACAATATATGAGT
AATTCTTCTAACGTTTTGTACCTTTTGTTGTTTCTTAATTTCTTATTTTT
CGTTTTGGATTTGGAAATCGGACCGAAGCATAAGCTGTTATATGTGTTGG
ACAATAGCCTTCGTTTTGATACCAGTAGTATCGAACGTACAGAGACCCTG
CTTTTGATTGTGCTGCAGTATATTAACGCTCTCGTCAACTTTTACACATG
TCGATAGTGATGATTGTGACCTGTACACATTTTAAGTACCGTCCGATTTA
TTCCGAAGTTTTTATTGTATGAGGTGAAGATTGTAAATTTCGGCACAATT
CAGTATTTACTGCAGGGCCGATTTGTTCTATAGTTTGCTCAATAAATCAA
TCACTACCACCGCAGGATCTACGTGTTCGGCGGGTTCTACGACGGCTACA
ACATCTCTCGGCAGCTGCAGTGCTACGATCCGCACACCAACTCCTGGAGC
GTGGTGGAGTCCAACATGATAGACTACACATGCGCACATGCCGTCAGACT
CGACAACCGGATATACTTACTAGGTGGGCACTCGTCGTGGCGTGTGCTAA
TATATGTCATCGTTCGTTCGTTCAGACCCTTCTGGTGACACATAGGGCAG
CAAGTTTCCTTGCTGATTCAGTAGCAGGGTATATCTTTCCACGGAGGAGT
TGCTGGCCTCCCCTCTAACATGCTCAAGACACCTCATAGAACACGGGACC
CCCTTTTACGTCCCTTCCGAAAGACGGGTGCAGCCCCAACCGAGTTGTTG
TGCTCAGGATTGAACCGGGATCTCCAAGTTAGCAACTAATTTGCTCCAGG
AGCTCAACCGTTAGGCTGCTACCAGTTGACCTACAGGGACATATGTCAAA
GATTAAGCTATATTTTAGATAGTTCAGCCAAGAGATAAAATTTTAAAGGT
GAATATAAATTCTCTTAAGGGTATTGTTCCAAAGGTTGTTGCAATTTCGA
CGAAGGTCTTTTGGAGATATTGTTGACAGAAAGGAGACAAGCGTCCTTTG
TTCACGGTCGAAACTGACGTCATTCATCAAATTGAACGTATAATCAAAAG
GCCATAACGATGATAGTGTCGACTTTAACAACTTATAATTACATATCATA
AATCTACCACACAGTGACATGGACGTCAGACAGAAGTAGTCATTGCACGT
CTGGCTCCAACGTAATCCGTCGTTTCCTTTCCTCTAGACGATGTAAAATG
ACGAAAGGTCTCAGGAAAGCTTTTTATATTTAACGAAGGAAAGACAAAGA
AGTCTTCATACTTGAGTGACAACCTGCGGTCATTAGTATACGTTTTTAAT
GCCTGTAATATTTTCTATGGTTCCAAAAGGCAATTACACACCTGGCCTCA
GGTAAGATGAGGGAAGGTCTTTTAAGGAAAGCAGGACAAAGAAGTTCTTA
TCCTACGATGGCAGCTACGAGTATGTACAGCAAAAGTACCAACGTAACGG
GTTCCTTTCTCAGCACTCGGTGTCCAGTACCGTAGTTATGTCTAGCACTG
GGTGTCCAGTGGTGACTGGCGACGTCATCACTGGAAAACCCCGTATCAGC
ACTGTATATGCACATGCGTCTTATATGTGACATTTCGTTTGTTTTTAGGT
GGCTCCTCCAAGACTGTAAAGGCTTACGACCCATCCGACGACTCCATCGT
CCGCGTGGCCGACATGAACATCAAGCGCGACAACTGCGGCGTCAGCGTGG
TGGGCGGGAAGATCTACGTGTCGGGCGGCGTCACCGAGTCCAACGGGCCC
GCCCTGGACTGCATCGAATGCTACGATCCCAAAAAGGATGAGTGGACGTT
CGGACACAAGTTACCCTGTCAGTTGTACCGACACGGGTTCGTCACGGTGC
AGATGTACAAGGAAGATATTCATGCGGGACAAAACTAG Coding sequence (CDS) from alignment at Sc0000120:797351..799788- >transcript:BL95781_evm1 ID=transcript:BL95781_evm1|Name=transcript:BL95781_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2484bp|location=Sequence derived from alignment at Sc0000120:797351..799788- (Branchiostoma lanceolatum)
ATGCCTCAATTAAGCCTTTTTGTGGCTGCCATGGTGTACGTCATTGGCGG
GTACGACGGCCAGCGGTGCCTGGAGGACGTGGAGCGGTACGACCCCGACA
AGGACAAGTGGGAGCGGCTCGCTCCGCTGGTGCACGCCGTCAAGTGCCCC
GCCGTGGCCGCCTACGACCGCAGGATCTACGTGTTCGGCGGGTTCTACGA
CGGCTACAACATCTCTCGGCAGCTGCAGTGCTACGATCCGCACACCAACT
CCTGGAGCGTGGTGGAGTCCAACATGATAGACTACACATGCGCACATGCC
GTCAGACTCGACAACCGGATATACTTACTAGGTGGCTCCTCCAAGACTGT
AAAGGCTTACGACCCATCCGACGACTCCATCGTCCGCGTGGCCGACATGA
ACATCAAGCGCGACAACTGCGGCGTCAGCGTGGTGGGCGGGAAGATCTAC
GTGTCGGGCGGCGTCACCGAGTCCAACGGGCCCGCCCTGGACTGCATCGA
ATGCTACGATCCCAAAAAGGATGAGTGGACGTTCGGACACAAGTTACCCT
GTCAGTTGTACCGACACGGGTTCGTCACGGTGCAGATGTACAAGGAAGAT
ATTCATGCGGGACAAAACTAGATGCCTCAATTAAGCCTTTTTGTGGCTGC
CATGGTGTACGTCATTGGCGGGTACGACGGCCAGCGGTGCCTGGAGGACG
TGGAGCGGTACGACCCCGACAAGGACAAGTGGGAGCGGCTCGCTCCGCTG
GTGCACGCCGTCAAGTGCCCCGCCGTGGCCGCCTACGACCGCAGGATCTA
CGTGTTCGGCGGGTTCTACGACGGCTACAACATCTCTCGGCAGCTGCAGT
GCTACGATCCGCACACCAACTCCTGGAGCGTGGTGGAGTCCAACATGATA
GACTACACATGCGCACATGCCGTCAGACTCGACAACCGGATATACTTACT
AGGTGGCTCCTCCAAGACTGTAAAGGCTTACGACCCATCCGACGACTCCA
TCGTCCGCGTGGCCGACATGAACATCAAGCGCGACAACTGCGGCGTCAGC
GTGGTGGGCGGGAAGATCTACGTGTCGGGCGGCGTCACCGAGTCCAACGG
GCCCGCCCTGGACTGCATCGAATGCTACGATCCCAAAAAGGATGAGTGGA
CGTTCGGACACAAGTTACCCTGTCAGTTGTACCGACACGGGTTCGTCACG
GTGCAGATGTACAAGGAAGATATTCATGCGGGACAAAACTAGATGCCTCA
ATTAAGCCTTTTTGTGGCTGCCATGGTGTACGTCATTGGCGGGTACGACG
GCCAGCGGTGCCTGGAGGACGTGGAGCGGTACGACCCCGACAAGGACAAG
TGGGAGCGGCTCGCTCCGCTGGTGCACGCCGTCAAGTGCCCCGCCGTGGC
CGCCTACGACCGCAGGATCTACGTGTTCGGCGGGTTCTACGACGGCTACA
ACATCTCTCGGCAGCTGCAGTGCTACGATCCGCACACCAACTCCTGGAGC
GTGGTGGAGTCCAACATGATAGACTACACATGCGCACATGCCGTCAGACT
CGACAACCGGATATACTTACTAGGTGGCTCCTCCAAGACTGTAAAGGCTT
ACGACCCATCCGACGACTCCATCGTCCGCGTGGCCGACATGAACATCAAG
CGCGACAACTGCGGCGTCAGCGTGGTGGGCGGGAAGATCTACGTGTCGGG
CGGCGTCACCGAGTCCAACGGGCCCGCCCTGGACTGCATCGAATGCTACG
ATCCCAAAAAGGATGAGTGGACGTTCGGACACAAGTTACCCTGTCAGTTG
TACCGACACGGGTTCGTCACGGTGCAGATGTACAAGGAAGATATTCATGC
GGGACAAAACTAGATGCCTCAATTAAGCCTTTTTGTGGCTGCCATGGTGT
ACGTCATTGGCGGGTACGACGGCCAGCGGTGCCTGGAGGACGTGGAGCGG
TACGACCCCGACAAGGACAAGTGGGAGCGGCTCGCTCCGCTGGTGCACGC
CGTCAAGTGCCCCGCCGTGGCCGCCTACGACCGCAGGATCTACGTGTTCG
GCGGGTTCTACGACGGCTACAACATCTCTCGGCAGCTGCAGTGCTACGAT
CCGCACACCAACTCCTGGAGCGTGGTGGAGTCCAACATGATAGACTACAC
ATGCGCACATGCCGTCAGACTCGACAACCGGATATACTTACTAGGTGGCT
CCTCCAAGACTGTAAAGGCTTACGACCCATCCGACGACTCCATCGTCCGC
GTGGCCGACATGAACATCAAGCGCGACAACTGCGGCGTCAGCGTGGTGGG
CGGGAAGATCTACGTGTCGGGCGGCGTCACCGAGTCCAACGGGCCCGCCC
TGGACTGCATCGAATGCTACGATCCCAAAAAGGATGAGTGGACGTTCGGA
CACAAGTTACCCTGTCAGTTGTACCGACACGGGTTCGTCACGGTGCAGAT
GTACAAGGAAGATATTCATGCGGGACAAAACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000120 | genome | Sc0000120:797351..799788 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95781_evm1 |
| Biotype | protein_coding |
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