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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95717_evm1 >transcript:BL95717_evm1-protein ID=transcript:BL95717_evm1-protein|Name=transcript:BL95717_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=234bp
MKSSGDAGVILLSLGSITAGMPERIEQVLLNAFAQVPQKVIWKMPPDIDP
KSLKFPPNVKPMSWMPQNDLLAHKKMKLFVTHGGTNGVYESVNHGVPMVS
LPLAADHHDNVARVVGRGFGVRLDIFTMTTEELLQAINHVLSTKSYQENV
DRAARILSDQPTPPMDRAMWWIEHLIRHGGLPHLRTRAHKIPFHEYFLLD
VIAFFAAVLSVVLADNKAKRKAKRNTAALNADEV Run BLAST on NCBI mRNA from alignment at Sc0000100:353586..355804- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95717_evm1 ID=transcript:BL95717_evm1|Name=transcript:BL95717_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2219bp|location=Sequence derived from alignment at Sc0000100:353586..355804- (Branchiostoma lanceolatum)
ATGAAGAGTTCTGGAGACGCAGGAGTGATCCTCTTAAGTCTGGGCTCCAT
CACAGCAGGCATGCCCGAGAGAATCGAACAAGTCCTGTTGAACGCCTTCG
CACAAGTACCCCAGAAGGTTATTTGGAAAATGCCTCCAGACATCGACCCT
AAGAGCCTGAAGTTCCCTCCCAACGTCAAGCCGATGAGCTGGATGCCACA
GAATGATCTGCTAGGTACGTGAAGAGTAATAAACCCATGTCGCATACGTC
GTCGACAGGTTTTCGAAATTGATGGCGTTCCTAGGAAAGTTGTGAATATG
ACGGCAAAGGTTGCTGAAGATCCTTGTCGTGTGTGGATCTGAATAAAGTC
AAAGACAGCAGGTTCTGTCATGGCGTCGCTAAAAACCGTTAGACAAAAGA
CCGCGCGTCGTTTCCATTTGACTGTACGCTCCAAGCAGAGTTCGGCCCGG
CTTGTTTTTGACGCCTTTTTAGGCATTTTTGTCGGGCTTTCTATTTTGTC
CCGTTTTCTTTATGCTCGTCTTCGCGACATAAAGAAAACGGTACTAGATA
GAAAGCCCGACAAAAATGCCTAAAAAGACGTCAAAAACAAACCGGGCCGA
ACTCTGCTTGGAGAGTTATGTGACCGAGCCTTTAACGTCTGATTAGTGAC
GTGATTTATACAATTCAATTCAGTATGTCGAAAGTCAACAGACCCATGCT
TTACTGTGACATAGTGTACCATATGTGGTACATAATCCACAAAAACATTT
TTTTAAGTGTCCTTCATCTGCTTCCTCCAACAGCACACAAGAAGATGAAG
CTGTTCGTCACACACGGAGGAACCAACGGCGTGTACGAGTCCGTCAACCA
CGGGGTACCGATGGTGTCTCTCCCGCTCGCCGCCGACCATCACGACAACG
TGGCCCGCGTGGTGGGACGAGGGTTCGGAGTCAGACTCGACATCTTCACC
ATGACAACGGAGGAACTGCTGCAGGCAATAAACCACGTGTTATCAACAAA
GAGGTGAGGGAAGTTAATCTCCAAGCAGACATATGGTATCCGCTTGTTGT
GATACAGGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGGGGGGGGGGGGGGTGGAGGGTGGAGAAGCAATTCTAGGTC
TAGGTCATTACCGGTACATCGTTCACCCTTTTACACTCTGCCATACATGG
CATATCGTGGCCTCTTGATATTCTCAAGACTTTGGTTGGGAGTAAGTCGT
GAGCAAGGTCATCTGTGGTTGGGAGATGGTCTACGAGGTCGTTTATTAGT
CTTTAAAAATCGTTTGCGTTATAAGGGAAGTCTAGCTTAAGTTGTAGGAA
CACTCCCCCTAATTCTGAGTTCCCTGGCTTAAGACATAACCAATCTAACA
GAACACCGTTGTTCCTGCTGACAGCTACCAGGAGAACGTGGACCGCGCCG
CCCGGATCCTGAGTGACCAGCCCACCCCGCCCATGGACCGCGCCATGTGG
TGGATAGAGCACCTCATCAGGCACGGCGGACTGCCTCATCTGCGCACGCG
CGCACACAAGATACCCTTTCACGAGTATTTCCTGCTCGACGTCATTGCTT
TCTTTGCAGCAGTTCTATCTGTGGTGTTAGGTGGGTTAGTGTGCGTTTGT
CGTCTGGTTTACCAAAAAATAAGAGGGAAACAACAAGGACAGAAGGAGAA
GAAAGACAATTGATTTTCATCAATGATGTATTCATGTTTTATCTATGCTT
CTTTGCTGCTATGAAATGGCTGTACATGTTACAAAACAATATTATCTCCA
ATGGTGTACAAATTCATGACTTACACTTTGTGACTAGCATTTACCTAGTG
TGAGGGACGGATTGATGACTGGTGATATTCTGGAATAGATTATTGTGTTA
TAAGCTGATAACAAGGCTAAGAGGAAGGCTAAGAGGAACACAGCCGCACT
CAACGCTGATGAAGTTTAG Coding sequence (CDS) from alignment at Sc0000100:353586..355804- >transcript:BL95717_evm1 ID=transcript:BL95717_evm1|Name=transcript:BL95717_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2820bp|location=Sequence derived from alignment at Sc0000100:353586..355804- (Branchiostoma lanceolatum)
ATGAAGAGTTCTGGAGACGCAGGAGTGATCCTCTTAAGTCTGGGCTCCAT
CACAGCAGGCATGCCCGAGAGAATCGAACAAGTCCTGTTGAACGCCTTCG
CACAAGTACCCCAGAAGGTTATTTGGAAAATGCCTCCAGACATCGACCCT
AAGAGCCTGAAGTTCCCTCCCAACGTCAAGCCGATGAGCTGGATGCCACA
GAATGATCTGCTAGCACACAAGAAGATGAAGCTGTTCGTCACACACGGAG
GAACCAACGGCGTGTACGAGTCCGTCAACCACGGGGTACCGATGGTGTCT
CTCCCGCTCGCCGCCGACCATCACGACAACGTGGCCCGCGTGGTGGGACG
AGGGTTCGGAGTCAGACTCGACATCTTCACCATGACAACGGAGGAACTGC
TGCAGGCAATAAACCACGTGTTATCAACAAAGAGCTACCAGGAGAACGTG
GACCGCGCCGCCCGGATCCTGAGTGACCAGCCCACCCCGCCCATGGACCG
CGCCATGTGGTGGATAGAGCACCTCATCAGGCACGGCGGACTGCCTCATC
TGCGCACGCGCGCACACAAGATACCCTTTCACGAGTATTTCCTGCTCGAC
GTCATTGCTTTCTTTGCAGCAGTTCTATCTGTGGTGTTAGCTGATAACAA
GGCTAAGAGGAAGGCTAAGAGGAACACAGCCGCACTCAACGCTGATGAAG
TTTAGATGAAGAGTTCTGGAGACGCAGGAGTGATCCTCTTAAGTCTGGGC
TCCATCACAGCAGGCATGCCCGAGAGAATCGAACAAGTCCTGTTGAACGC
CTTCGCACAAGTACCCCAGAAGGTTATTTGGAAAATGCCTCCAGACATCG
ACCCTAAGAGCCTGAAGTTCCCTCCCAACGTCAAGCCGATGAGCTGGATG
CCACAGAATGATCTGCTAGCACACAAGAAGATGAAGCTGTTCGTCACACA
CGGAGGAACCAACGGCGTGTACGAGTCCGTCAACCACGGGGTACCGATGG
TGTCTCTCCCGCTCGCCGCCGACCATCACGACAACGTGGCCCGCGTGGTG
GGACGAGGGTTCGGAGTCAGACTCGACATCTTCACCATGACAACGGAGGA
ACTGCTGCAGGCAATAAACCACGTGTTATCAACAAAGAGCTACCAGGAGA
ACGTGGACCGCGCCGCCCGGATCCTGAGTGACCAGCCCACCCCGCCCATG
GACCGCGCCATGTGGTGGATAGAGCACCTCATCAGGCACGGCGGACTGCC
TCATCTGCGCACGCGCGCACACAAGATACCCTTTCACGAGTATTTCCTGC
TCGACGTCATTGCTTTCTTTGCAGCAGTTCTATCTGTGGTGTTAGCTGAT
AACAAGGCTAAGAGGAAGGCTAAGAGGAACACAGCCGCACTCAACGCTGA
TGAAGTTTAGATGAAGAGTTCTGGAGACGCAGGAGTGATCCTCTTAAGTC
TGGGCTCCATCACAGCAGGCATGCCCGAGAGAATCGAACAAGTCCTGTTG
AACGCCTTCGCACAAGTACCCCAGAAGGTTATTTGGAAAATGCCTCCAGA
CATCGACCCTAAGAGCCTGAAGTTCCCTCCCAACGTCAAGCCGATGAGCT
GGATGCCACAGAATGATCTGCTAGCACACAAGAAGATGAAGCTGTTCGTC
ACACACGGAGGAACCAACGGCGTGTACGAGTCCGTCAACCACGGGGTACC
GATGGTGTCTCTCCCGCTCGCCGCCGACCATCACGACAACGTGGCCCGCG
TGGTGGGACGAGGGTTCGGAGTCAGACTCGACATCTTCACCATGACAACG
GAGGAACTGCTGCAGGCAATAAACCACGTGTTATCAACAAAGAGCTACCA
GGAGAACGTGGACCGCGCCGCCCGGATCCTGAGTGACCAGCCCACCCCGC
CCATGGACCGCGCCATGTGGTGGATAGAGCACCTCATCAGGCACGGCGGA
CTGCCTCATCTGCGCACGCGCGCACACAAGATACCCTTTCACGAGTATTT
CCTGCTCGACGTCATTGCTTTCTTTGCAGCAGTTCTATCTGTGGTGTTAG
CTGATAACAAGGCTAAGAGGAAGGCTAAGAGGAACACAGCCGCACTCAAC
GCTGATGAAGTTTAGATGAAGAGTTCTGGAGACGCAGGAGTGATCCTCTT
AAGTCTGGGCTCCATCACAGCAGGCATGCCCGAGAGAATCGAACAAGTCC
TGTTGAACGCCTTCGCACAAGTACCCCAGAAGGTTATTTGGAAAATGCCT
CCAGACATCGACCCTAAGAGCCTGAAGTTCCCTCCCAACGTCAAGCCGAT
GAGCTGGATGCCACAGAATGATCTGCTAGCACACAAGAAGATGAAGCTGT
TCGTCACACACGGAGGAACCAACGGCGTGTACGAGTCCGTCAACCACGGG
GTACCGATGGTGTCTCTCCCGCTCGCCGCCGACCATCACGACAACGTGGC
CCGCGTGGTGGGACGAGGGTTCGGAGTCAGACTCGACATCTTCACCATGA
CAACGGAGGAACTGCTGCAGGCAATAAACCACGTGTTATCAACAAAGAGC
TACCAGGAGAACGTGGACCGCGCCGCCCGGATCCTGAGTGACCAGCCCAC
CCCGCCCATGGACCGCGCCATGTGGTGGATAGAGCACCTCATCAGGCACG
GCGGACTGCCTCATCTGCGCACGCGCGCACACAAGATACCCTTTCACGAG
TATTTCCTGCTCGACGTCATTGCTTTCTTTGCAGCAGTTCTATCTGTGGT
GTTAGCTGATAACAAGGCTAAGAGGAAGGCTAAGAGGAACACAGCCGCAC
TCAACGCTGATGAAGTTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000100 | genome | Sc0000100:353586..355804 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95717_evm1 |
| Biotype | protein_coding |
|
