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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95709_evm0 >transcript:BL95709_evm0-protein ID=transcript:BL95709_evm0-protein|Name=transcript:BL95709_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=249bp
MIYTQLVGPIFHPCIWYCKSHPSRPRGNPRHDLQNEACDGRPACGVCVHD
LDTLARGVRLHRAPQRDQQQQPPPGARTGQQPTPGTRFGAQYQSAQDGHS
VQWPQKVIAIQQGGADWSSGRRRRSRRSSNSGLFDQQCQQCTPGYVAFDS
LTNKYRLQYGSISEDAQLMRICRSGSAACNRGRCSVNYLYRNGTITDFPN
IVGDPYVGRISSTLESVLICGTLRHAASLQVTLLALAAGALAMWMIRRD Run BLAST on NCBI mRNA from alignment at Sc0000100:757528..760487+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95709_evm0 ID=transcript:BL95709_evm0|Name=transcript:BL95709_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2960bp|location=Sequence derived from alignment at Sc0000100:757528..760487+ (Branchiostoma lanceolatum)
ATGATCTATACGCAGCTAGTAGGACCGATTTTCCACCCGTGTATTTGGTA
CTGTAAGTCCCACCCGTCGAGACCGAGGGGGAAGTTAGAAAGATAGATAT
GAAACAGGATGTTTGAAATTTTCCACAGTTACATGACATCGCTCTGTCGG
GATTTTACGCCTTTTTGTTGTTAACTGGGTCGGCGGGAATAGTTGAGCAT
TTAACCATGCGTGACATATGACCCGTCCAACTACTTTCCTTGTCATTCGT
CCAGTCCAAGACACGACCTCCAAAATGAGGCTTGTGACGGTCGGCCTGCT
TGTGGCGTGTGTGTTCATGATCTTGATACACTGGCACGGGGCGTCAGGCT
TCACCGGGCGCCGCAGAGGGACCAGCAGCAGCAGCCGCCGCCGGGCGCCC
GTACCGGTCAGCAGCCGACGCCGGGCACCCGTTTTGGTGCCCAGTACCAG
TCGGCGCAGGACGGCCATAGTGTCCAGTGGCCGCAGAAGGTCATCGCTAT
CCAGCAGGGTGGTGCGGACTGGTGTGCGGCTTGTCGGATCTCGGTTATTG
TGAGTGTCACACTCTCTACATTAACTCACTACGTGTTGTCTTACTGTCAT
AGTTTCCCTTTTTCTTTCTCAGTTAATAAAGAAAGCGGTTAGTAGATTTA
GGTATTTTTTTCTAGTACATTTTGCACCGTAGGAAAGAGAGAAGATAAAG
GTATAAAGCATCAGTCACAGGATACGATTATAATTAAGGTTCAAGTTAAG
ATATCCGTTTTAACGGCACTCTTTTCAACTTTCTTCTTTTTAGTAGAAGG
GTATGTTTTTATGAGGATGGGTTGCTAGCCCTTCCCCTTTAACGTGCCCG
AGGCACCTCCTCGAATATAGGTCACCCATTTTGCGTCCCTTGGGGTGCAG
CCCCAACCAAGATGAACTGTCCCAGGATTTGGACCGGGGTCTCCCAGATA
CCAACTAATTGGAACCAGGAGCTCAACTGTGAAGCTGCTACCAGTTGAGC
TACAGTGACATCCCTAATTAAACTTTGCACATGACATAATTGTTGACTAT
TGGCGTTATTCCCCAGGAGTAGCGGGCGGCGTCGGCGGTCCCGGCGGTCC
AGCAACAGCGGCCTGTTTGACCAGCAGTGTCAGCAGTGCACGCCAGGATA
TGTCGCCTTCGATTCTCTCACTAATAAATACAGACTACAGGTGGGTTTAA
CGTGTAAAAAGAGGTAAAGATATCACTAGTCATTACTGTCGTGGAGTGTA
ATTATATGCACTTAAATTCATCATTGCAGGAGAGAATAAGATGATTTTGA
GTTCTTTCCGTATATAAGAAGTATTGAATTTATTTTTTCTTGTGCCAGCT
TAGCCCGTAGAAAGCATCGGTTAGATACTTTCGCAACTTACTAATCACCA
TTGCAGGACCATTAGGCAGAAAAGGGGAACAAAGACTATGGTACATAGGA
AGAACTTAGAGATACTCTGAATACGTGCTGTACTCCCCAATTGATAACTT
GTAGCTGTACAAAAACGTTAAGATACTAGTGCTAGGGTCATGTTTATGGT
CATGTTTCACACCTTTAAATGACATCGTTTTCGTTAATGAGGAACTTCTT
GCTCCTGTTCCTGTTTCACGTTTTGTTTGCACCGTGTTAGCCTGGCGTGG
GCGGATAAGCAAATCCTTTCAAAAACTGTCAGATCGAGAAACGTTTACTC
TTTTTGCAGAAGTGAAGGTAAAAGGCAAAGCAGGCATCCTCAATTGAGGT
GAAACATGATGCTTTTTCAAGTAACTAGTGGTAGTGCAATACGGCTTCGC
CTTTACAGAACTATGGCCTGAGAGGGACCAAAATCGTTTGCTTGTGTCGC
GTATTAAACGCGCACGGTTTCTGTATTTTTNGGAGGGAGATTGGCAAAGT
ATGATGCTCTTGCAAATGTTGCCTTCCTACATGCAGTTAATATTTCGATT
TGCCCAGGGGTTATTTTGGGACAGCCCACTTCTTGCATGGGGAGGAGTAT
GGCTAAACATGCTGTATTTGCTCAGGGGCAAATGACGGCCTTTCTAGTTG
TATCTATTTCTTATTTGTCAAAGATAGGGTACTGACAACCCTCCTGTGTA
CCAATGAATACATACTGACGGACTTTGTCTATTTTCAGTACGGCTCCATT
TCCGAGGACGCACAGCTGATGAGGATCTGCCGCAGCGGCAGCGCGGCGTG
TAACAGGGGAAGGTGTTCAGTCAACTACCTGTACAGGAACGGCACCATCA
CGGACTTCCCTAAGTACGTTACCTCCATCGGGCATTCCTATGTTTCTTGA
TCACTGCTTCATGCTATATTATTGTGAATGTATCATTCAATCAGTTGATG
TTAAGTTACGATAAGTTATGTTTAGATTCCTAAATAAAACAAAATTAAAA
AATAAGTTCCTGAAGGGGTTGCGAATAGCAGAATTCGGCCCCAAAAAAGC
AAAAATAGCTGCATAATTGGCCAGGAGAGTCAGTCCTAAGGAAGGTTATC
ATTTTGCCTTTGATGTTACCCTATGGTGGCCACACTTTCCTGGCATATAA
TTCTCCATATATAGTCAGCGTAGGTAATCTGGTCAAGGAGGCCACAGAGT
GGTCTGGTAGAAACTAATACGTACGTAGTGCACTAGCGCGCTCTCAAGGA
CTAGCTCTAAATCAAGTTGGACGATATTTCTGAAAGGCACATAGTACTTA
CTGCGTCTTGGGTGTATGTGAAAAACACTTTGAAATAGTTTCGAGCTAGT
AGCGATGTCTCAATTTTGCCCCGTCATGTCCGTACTGATTCAATACCTTT
GACTTACAGCATTGTCGGGGACCCTTACGTCGGACGTATTTCAAGTACAC
TGGAGTCAGTGCTCATCTGCGGCACCTTGCGACATGCTGCGTCCCTACAG
GTCACGCTGCTGGCCCTTGCTGCTGGAGCCCTGGCGATGTGGATGATCCG
CCGTGACTGA Coding sequence (CDS) from alignment at Sc0000100:757528..760487+ >transcript:BL95709_evm0 ID=transcript:BL95709_evm0|Name=transcript:BL95709_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3750bp|location=Sequence derived from alignment at Sc0000100:757528..760487+ (Branchiostoma lanceolatum)
ATGATCTATACGCAGCTAGTAGGACCGATTTTCCACCCGTGTATTTGGTA
CTGTAAGTCCCACCCGTCGAGACCGAGGGGGAATCCAAGACACGACCTCC
AAAATGAGGCTTGTGACGGTCGGCCTGCTTGTGGCGTGTGTGTTCATGAT
CTTGATACACTGGCACGGGGCGTCAGGCTTCACCGGGCGCCGCAGAGGGA
CCAGCAGCAGCAGCCGCCGCCGGGCGCCCGTACCGGTCAGCAGCCGACGC
CGGGCACCCGTTTTGGTGCCCAGTACCAGTCGGCGCAGGACGGCCATAGT
GTCCAGTGGCCGCAGAAGGTCATCGCTATCCAGCAGGGTGGTGCGGACTG
GAGTAGCGGGCGGCGTCGGCGGTCCCGGCGGTCCAGCAACAGCGGCCTGT
TTGACCAGCAGTGTCAGCAGTGCACGCCAGGATATGTCGCCTTCGATTCT
CTCACTAATAAATACAGACTACAGTACGGCTCCATTTCCGAGGACGCACA
GCTGATGAGGATCTGCCGCAGCGGCAGCGCGGCGTGTAACAGGGGAAGGT
GTTCAGTCAACTACCTGTACAGGAACGGCACCATCACGGACTTCCCTAAC
ATTGTCGGGGACCCTTACGTCGGACGTATTTCAAGTACACTGGAGTCAGT
GCTCATCTGCGGCACCTTGCGACATGCTGCGTCCCTACAGGTCACGCTGC
TGGCCCTTGCTGCTGGAGCCCTGGCGATGTGGATGATCCGCCGTGACTGA
ATGATCTATACGCAGCTAGTAGGACCGATTTTCCACCCGTGTATTTGGTA
CTGTAAGTCCCACCCGTCGAGACCGAGGGGGAATCCAAGACACGACCTCC
AAAATGAGGCTTGTGACGGTCGGCCTGCTTGTGGCGTGTGTGTTCATGAT
CTTGATACACTGGCACGGGGCGTCAGGCTTCACCGGGCGCCGCAGAGGGA
CCAGCAGCAGCAGCCGCCGCCGGGCGCCCGTACCGGTCAGCAGCCGACGC
CGGGCACCCGTTTTGGTGCCCAGTACCAGTCGGCGCAGGACGGCCATAGT
GTCCAGTGGCCGCAGAAGGTCATCGCTATCCAGCAGGGTGGTGCGGACTG
GAGTAGCGGGCGGCGTCGGCGGTCCCGGCGGTCCAGCAACAGCGGCCTGT
TTGACCAGCAGTGTCAGCAGTGCACGCCAGGATATGTCGCCTTCGATTCT
CTCACTAATAAATACAGACTACAGTACGGCTCCATTTCCGAGGACGCACA
GCTGATGAGGATCTGCCGCAGCGGCAGCGCGGCGTGTAACAGGGGAAGGT
GTTCAGTCAACTACCTGTACAGGAACGGCACCATCACGGACTTCCCTAAC
ATTGTCGGGGACCCTTACGTCGGACGTATTTCAAGTACACTGGAGTCAGT
GCTCATCTGCGGCACCTTGCGACATGCTGCGTCCCTACAGGTCACGCTGC
TGGCCCTTGCTGCTGGAGCCCTGGCGATGTGGATGATCCGCCGTGACTGA
ATGATCTATACGCAGCTAGTAGGACCGATTTTCCACCCGTGTATTTGGTA
CTGTAAGTCCCACCCGTCGAGACCGAGGGGGAATCCAAGACACGACCTCC
AAAATGAGGCTTGTGACGGTCGGCCTGCTTGTGGCGTGTGTGTTCATGAT
CTTGATACACTGGCACGGGGCGTCAGGCTTCACCGGGCGCCGCAGAGGGA
CCAGCAGCAGCAGCCGCCGCCGGGCGCCCGTACCGGTCAGCAGCCGACGC
CGGGCACCCGTTTTGGTGCCCAGTACCAGTCGGCGCAGGACGGCCATAGT
GTCCAGTGGCCGCAGAAGGTCATCGCTATCCAGCAGGGTGGTGCGGACTG
GAGTAGCGGGCGGCGTCGGCGGTCCCGGCGGTCCAGCAACAGCGGCCTGT
TTGACCAGCAGTGTCAGCAGTGCACGCCAGGATATGTCGCCTTCGATTCT
CTCACTAATAAATACAGACTACAGTACGGCTCCATTTCCGAGGACGCACA
GCTGATGAGGATCTGCCGCAGCGGCAGCGCGGCGTGTAACAGGGGAAGGT
GTTCAGTCAACTACCTGTACAGGAACGGCACCATCACGGACTTCCCTAAC
ATTGTCGGGGACCCTTACGTCGGACGTATTTCAAGTACACTGGAGTCAGT
GCTCATCTGCGGCACCTTGCGACATGCTGCGTCCCTACAGGTCACGCTGC
TGGCCCTTGCTGCTGGAGCCCTGGCGATGTGGATGATCCGCCGTGACTGA
ATGATCTATACGCAGCTAGTAGGACCGATTTTCCACCCGTGTATTTGGTA
CTGTAAGTCCCACCCGTCGAGACCGAGGGGGAATCCAAGACACGACCTCC
AAAATGAGGCTTGTGACGGTCGGCCTGCTTGTGGCGTGTGTGTTCATGAT
CTTGATACACTGGCACGGGGCGTCAGGCTTCACCGGGCGCCGCAGAGGGA
CCAGCAGCAGCAGCCGCCGCCGGGCGCCCGTACCGGTCAGCAGCCGACGC
CGGGCACCCGTTTTGGTGCCCAGTACCAGTCGGCGCAGGACGGCCATAGT
GTCCAGTGGCCGCAGAAGGTCATCGCTATCCAGCAGGGTGGTGCGGACTG
GAGTAGCGGGCGGCGTCGGCGGTCCCGGCGGTCCAGCAACAGCGGCCTGT
TTGACCAGCAGTGTCAGCAGTGCACGCCAGGATATGTCGCCTTCGATTCT
CTCACTAATAAATACAGACTACAGTACGGCTCCATTTCCGAGGACGCACA
GCTGATGAGGATCTGCCGCAGCGGCAGCGCGGCGTGTAACAGGGGAAGGT
GTTCAGTCAACTACCTGTACAGGAACGGCACCATCACGGACTTCCCTAAC
ATTGTCGGGGACCCTTACGTCGGACGTATTTCAAGTACACTGGAGTCAGT
GCTCATCTGCGGCACCTTGCGACATGCTGCGTCCCTACAGGTCACGCTGC
TGGCCCTTGCTGCTGGAGCCCTGGCGATGTGGATGATCCGCCGTGACTGA
ATGATCTATACGCAGCTAGTAGGACCGATTTTCCACCCGTGTATTTGGTA
CTGTAAGTCCCACCCGTCGAGACCGAGGGGGAATCCAAGACACGACCTCC
AAAATGAGGCTTGTGACGGTCGGCCTGCTTGTGGCGTGTGTGTTCATGAT
CTTGATACACTGGCACGGGGCGTCAGGCTTCACCGGGCGCCGCAGAGGGA
CCAGCAGCAGCAGCCGCCGCCGGGCGCCCGTACCGGTCAGCAGCCGACGC
CGGGCACCCGTTTTGGTGCCCAGTACCAGTCGGCGCAGGACGGCCATAGT
GTCCAGTGGCCGCAGAAGGTCATCGCTATCCAGCAGGGTGGTGCGGACTG
GAGTAGCGGGCGGCGTCGGCGGTCCCGGCGGTCCAGCAACAGCGGCCTGT
TTGACCAGCAGTGTCAGCAGTGCACGCCAGGATATGTCGCCTTCGATTCT
CTCACTAATAAATACAGACTACAGTACGGCTCCATTTCCGAGGACGCACA
GCTGATGAGGATCTGCCGCAGCGGCAGCGCGGCGTGTAACAGGGGAAGGT
GTTCAGTCAACTACCTGTACAGGAACGGCACCATCACGGACTTCCCTAAC
ATTGTCGGGGACCCTTACGTCGGACGTATTTCAAGTACACTGGAGTCAGT
GCTCATCTGCGGCACCTTGCGACATGCTGCGTCCCTACAGGTCACGCTGC
TGGCCCTTGCTGCTGGAGCCCTGGCGATGTGGATGATCCGCCGTGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000100 | genome | Sc0000100:757528..760487 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95709_evm0 |
| Biotype | protein_coding |
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