|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95666_evm2 >transcript:BL95666_evm2-protein ID=transcript:BL95666_evm2-protein|Name=transcript:BL95666_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=252bp
MDFSCKTCGVEFNNTFEIKKHLASKQHLRKVGCSKDDAEKTKENGSEKNE
IPTAKSPPMAMTVDCVNDDLSSDDGCGFGAEDMEDEDTPQSTGSASKVDG
TEVQGTYCDLCEHDYGNQSKLKAHLGTKKHLEVAAALSGTANDEDIPLAT
GSGRKVKRKNAXKVKRKDAGHRVDEGTASTKSEAERSLQDGEESASGNEG
EVRREDRNSEVDKETFVDISMENSMQNDNEGYVTLRAQDSHDEAYGGEAI
PL Run BLAST on NCBI mRNA from alignment at Sc0000089:312087..314326+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95666_evm2 ID=transcript:BL95666_evm2|Name=transcript:BL95666_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2240bp|location=Sequence derived from alignment at Sc0000089:312087..314326+ (Branchiostoma lanceolatum)
ATGGACTTCTCCTGTAAGACTTGCGGAGTGGAGTTTAACAACACTTTTGA
AATCAAGAAACATCTTGCCAGCAAACAACATCTTAGGAAAGTTGGCTGTT
CTAAAGATGATGCTGAGAAGACCAAGGAGAACGGGTCAGAAAAAAATGAA
ATACCCACGGCCAAAAGTCCACCCATGGCCATGACAGTGGACTGTGTCAA
TGATGACTTGAGCTCTGATGACGGTTGTGGATTTGGTGCAGAAGACATGG
AGGATGAAGACACTCCCCAGTCCACAGGCTCTGCTTCAAAGGTGGATGGT
ACTGAAGTACAGGGAACCTACTGTGACCTATGTGAACATGACTATGGTAA
TCAATCCAAATTAAAGGCACATCTCGGAACTAAAAAGCACCTCGAAGTAG
CGGCAGCCCTTAGTGGTACAGCCAATGATGAAGACATCCCCCTTGCCACA
GGCTCCGGGTCAGTCTCACAGGTGGATGATAATGATCAGGCTACCTTCTG
TGAGCTATGTAAACATGATTACGGCCGCTTATCTAGGTTAAAAGCACATC
TTGAAACTAAAAAGCACCTCGAAAAAGCAGCAGCCCTTGGTGATTCATCC
AAGGATGAAGACACCCCCTTTGCCACTGGCACTAGGTCAGCCTCAAGGGT
GGGTGGTAATGCTGAAGTACCCTACTGTAATGTTTGTCAACTTGAATTTC
GGTATGAATCCAAATTGAGAGAACACCTCTGTAGTCAAAAGCATCGCAGA
GCAACCATGGAGCAAGAAAAGTCAGAGAATGGTACAACAGTCAAAGAAGG
GAGAAGCAATAATTTACTAGACAGAGACATTCCCCATGATATAGCTGATG
ATGACAATGATACACTTGCACATGAGAAGGTACCACACGGTACCGACAAT
AAGGATATAGGAGATAAAGACAAACTAAGAAAAAACCCTGGGAGTAAAAG
GGAACCCAGAGCTGTCAACGATTGGTATTGTGAAGTATGTCAAAGTGGTT
TTAAGCGTAGAGTGCACTTACAGATACACCTTGGTACAAAGAAGCACCTC
AAAACTGCCGCCGGTGGTCCAAGAAGTAGTTATTGTGAGGTATGTCAGAG
GGACTTTGTCCGTAGGTCCAAGTTAGAGGCACACTTACTTACTGAAAGGC
ACCTCAGAGCAGCCAGTGGAGGCAAAGTTAAGACCAGAAAAAAATCTGAT
GACCCATCCAAGAGAAGGAAAGTCAAAAGGAAAAATGCANGGAAAGTCAA
AAGGAAAGATGCAGGCCATAGGGTTGATGAAGGGACTGCTAGCACCAAGT
CTGAGGCGGAACGCAGTCTGCAAGATGGTGAGGAATCTGCAAGTGGGAAT
GAAGGAGAAGTCAGGAGGGAAGACAGGAACAGTGAAGTTGACAAGGAGAC
GTTTGTCGATATCAGCATGGAAAACAGCATGCAAAATGACAACGAGGTTA
GGAATGTGAAGAAACGAAAGAAAAGAAAGAAGAAGTTGACTGAGATTGAT
AGTTCTGATTGTTCTTCAGATGAGCACAATAAAGCATCTAATGACAAAGA
CAGAAAGAAGACAAAAAATAATGGGAATGCCCCCAGTCATGCAAAACCTA
AGAAGACATACAGGAAACGTGCAGCTAAAAGTGACGCGTTTGCATGTAAG
TATTGTAACCTAGCCTTTCACCAGCCTTGTGCCCTGTTCAATCATGCAGA
AAAGTATGTCAAGAAGAAGAAAGCTTGTCACGACCCGATCTTTCTGTGTT
ACCCTTGTAGACATGTAGCCTACACCAGTGAAGAATATGAAGAGCACTGT
AAAACACAGGACCATGCTGTTTATGAGGAGTTGTACAAGCACATCCAGGA
AAATCCGGAAGGGGATAAAAGATACAGTTGCACCATATGTGAATACCAGA
CATCCAAAAGGCACTACATAGAGCATCATGTACCAAAACACCTTGTTGAG
AAAGGCAAGGTGTTTCCCTGTGATCAGTGTGAGATGTTTTTCCCGTCAAG
AAGAGCAAGACAGCGTCACAGAGCTCAGATACATGAAAAAAGCTTGGAGA
AAGATATCATCTGTGAGGTCTGTGGGAAGAGGTTCCATCTATTGGGCAAC
TTTGGTGCTCACATGAAAATGCACAAGGGACTAAAACCTCACAAATGCAC
CCATGAGGGCTGCATGTTCAGGGCTATGTCACCCTCAGAGCTCAGGACTC
ACATGATGAGGCATACGGGGGAGAAGCCATTCCTTTGTGA Coding sequence (CDS) from alignment at Sc0000089:312087..314326+ >transcript:BL95666_evm2 ID=transcript:BL95666_evm2|Name=transcript:BL95666_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=2277bp|location=Sequence derived from alignment at Sc0000089:312087..314326+ (Branchiostoma lanceolatum)
ATGGACTTCTCCTGTAAGACTTGCGGAGTGGAGTTTAACAACACTTTTGA
AATCAAGAAACATCTTGCCAGCAAACAACATCTTAGGAAAGTTGGCTGTT
CTAAAGATGATGCTGAGAAGACCAAGGAGAACGGGTCAGAAAAAAATGAA
ATACCCACGGCCAAAAGTCCACCCATGGCCATGACAGTGGACTGTGTCAA
TGATGACTTGAGCTCTGATGACGGTTGTGGATTTGGTGCAGAAGACATGG
AGGATGAAGACACTCCCCAGTCCACAGGCTCTGCTTCAAAGGTGGATGGT
ACTGAAGTACAGGGAACCTACTGTGACCTATGTGAACATGACTATGGTAA
TCAATCCAAATTAAAGGCACATCTCGGAACTAAAAAGCACCTCGAAGTAG
CGGCAGCCCTTAGTGGTACAGCCAATGATGAAGACATCCCCCTTGCCACA
GGCTCCGGAAGGAAAGTCAAAAGGAAAAATGCANGGAAAGTCAAAAGGAA
AGATGCAGGCCATAGGGTTGATGAAGGGACTGCTAGCACCAAGTCTGAGG
CGGAACGCAGTCTGCAAGATGGTGAGGAATCTGCAAGTGGGAATGAAGGA
GAAGTCAGGAGGGAAGACAGGAACAGTGAAGTTGACAAGGAGACGTTTGT
CGATATCAGCATGGAAAACAGCATGCAAAATGACAACGAGGGCTATGTCA
CCCTCAGAGCTCAGGACTCACATGATGAGGCATACGGGGGAGAAGCCATT
CCTTTGTGAATGGACTTCTCCTGTAAGACTTGCGGAGTGGAGTTTAACAA
CACTTTTGAAATCAAGAAACATCTTGCCAGCAAACAACATCTTAGGAAAG
TTGGCTGTTCTAAAGATGATGCTGAGAAGACCAAGGAGAACGGGTCAGAA
AAAAATGAAATACCCACGGCCAAAAGTCCACCCATGGCCATGACAGTGGA
CTGTGTCAATGATGACTTGAGCTCTGATGACGGTTGTGGATTTGGTGCAG
AAGACATGGAGGATGAAGACACTCCCCAGTCCACAGGCTCTGCTTCAAAG
GTGGATGGTACTGAAGTACAGGGAACCTACTGTGACCTATGTGAACATGA
CTATGGTAATCAATCCAAATTAAAGGCACATCTCGGAACTAAAAAGCACC
TCGAAGTAGCGGCAGCCCTTAGTGGTACAGCCAATGATGAAGACATCCCC
CTTGCCACAGGCTCCGGAAGGAAAGTCAAAAGGAAAAATGCANGGAAAGT
CAAAAGGAAAGATGCAGGCCATAGGGTTGATGAAGGGACTGCTAGCACCA
AGTCTGAGGCGGAACGCAGTCTGCAAGATGGTGAGGAATCTGCAAGTGGG
AATGAAGGAGAAGTCAGGAGGGAAGACAGGAACAGTGAAGTTGACAAGGA
GACGTTTGTCGATATCAGCATGGAAAACAGCATGCAAAATGACAACGAGG
GCTATGTCACCCTCAGAGCTCAGGACTCACATGATGAGGCATACGGGGGA
GAAGCCATTCCTTTGTGAATGGACTTCTCCTGTAAGACTTGCGGAGTGGA
GTTTAACAACACTTTTGAAATCAAGAAACATCTTGCCAGCAAACAACATC
TTAGGAAAGTTGGCTGTTCTAAAGATGATGCTGAGAAGACCAAGGAGAAC
GGGTCAGAAAAAAATGAAATACCCACGGCCAAAAGTCCACCCATGGCCAT
GACAGTGGACTGTGTCAATGATGACTTGAGCTCTGATGACGGTTGTGGAT
TTGGTGCAGAAGACATGGAGGATGAAGACACTCCCCAGTCCACAGGCTCT
GCTTCAAAGGTGGATGGTACTGAAGTACAGGGAACCTACTGTGACCTATG
TGAACATGACTATGGTAATCAATCCAAATTAAAGGCACATCTCGGAACTA
AAAAGCACCTCGAAGTAGCGGCAGCCCTTAGTGGTACAGCCAATGATGAA
GACATCCCCCTTGCCACAGGCTCCGGAAGGAAAGTCAAAAGGAAAAATGC
ANGGAAAGTCAAAAGGAAAGATGCAGGCCATAGGGTTGATGAAGGGACTG
CTAGCACCAAGTCTGAGGCGGAACGCAGTCTGCAAGATGGTGAGGAATCT
GCAAGTGGGAATGAAGGAGAAGTCAGGAGGGAAGACAGGAACAGTGAAGT
TGACAAGGAGACGTTTGTCGATATCAGCATGGAAAACAGCATGCAAAATG
ACAACGAGGGCTATGTCACCCTCAGAGCTCAGGACTCACATGATGAGGCA
TACGGGGGAGAAGCCATTCCTTTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000089 | genome | Sc0000089:312087..314326 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95666_evm2 |
| Biotype | protein_coding |
|
