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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95663_evm1 >transcript:BL95663_evm1-protein ID=transcript:BL95663_evm1-protein|Name=transcript:BL95663_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=425bp
MSSHAASCCEAGRPIMSDPHTGQAVCSCQYEGRVAGLVPPRVGEMSLSSV
YGSPYAGQGYIASFGADPSAFYSPLANPYDPSAGLQQPTAYYPYDPATLA
AGAQYPYGSYGAMDGTRRKNATRDATSTLKAWLNEHRKNPYPTKGEKIML
AIITKMTLTQVSTWFANARRRLKKENKMTWSPRNRCGDERREDGSDNEDD
DDDEDRKDREGNSDDDNHGGLEGDRDNKELDVGNPCEENRQEDNTSGSVS
DYRPPPQSSSPADSLGSISAAPRPASPEPSPAANSVPVPPIPSENKPKIW
SLADTATCSSPVPRPDIVKTTLQGPLHMQFSHHRPFDSAVTNLRQWVDGV
FHRPIGPLPSGPMGPLTVATQASASATVSGMHPSSNPHTTPPGFVSSQER
TPALPIALRTHASPAKDGEFNLSTQ Run BLAST on NCBI mRNA from alignment at Sc0000089:112142..114155+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95663_evm1 ID=transcript:BL95663_evm1|Name=transcript:BL95663_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2014bp|location=Sequence derived from alignment at Sc0000089:112142..114155+ (Branchiostoma lanceolatum)
ATGTCCAGCCACGCCGCGTCGTGCTGCGAGGCCGGGCGGCCCATCATGTC
GGACCCGCACACCGGCCAGGCCGTGTGCTCCTGCCAGTACGAGGGCAGGG
TGGCCGGGCTGGTGCCGCCGCGGGTCGGTGAGATGTCCCTCAGCAGCGTG
TACGGCTCGCCGTACGCCGGCCAGGGCTACATCGCCTCCTTCGGTGCCGA
CCCGTCGGCCTTCTACTCGCCTTTGGTAGGTATAAAGTAAAGGTATACTT
CTCCTTTGCTGCTACCCAAACCCGCCTGTTTACTATTACATTACACACTA
ATCAGAGTTAAACTGTTTGTGGTTTATCTGAGACCTATTACGAACTAAAG
ACATAACATTTGCTTTAATCACAATAGGTACTGTGTGCGTTATCATTAAA
AATTTCGGTTTTACACCTGAGCAGGCCGTAACCATACACAGCCATCTTCC
CTGGCCGACTGATAATGTGTATGTGGTATATGAGGTCGCCCCGTATGGCA
CCACGTTGTCACATACGATCAGTGGGACGGCTTGACTCGCGCGCCATGTT
TACCATTGTTGACATGTGGAAATTAACCTCCGACTGTACCGTCTCCTGAC
GTGCTGCAGGCGAACCCGTACGACCCGTCGGCAGGTCTGCAGCAGCCCAC
CGCCTACTACCCGTACGACCCGGCCACGCTAGCCGCCGGCGCACAGTACC
CATACGGCAGGTAAGGGCAATGTTTACTTGTGCTGTTTTCCTGCTCAGCT
AATTATTGATATGATTATTCATAGATGTAATTGTTATCAAAATTGTAACA
GTCTCGGTGATCGTGTCAGTGGTTTATTCTTGTGATTTCGTCTTTAGCTA
TGGCGCTATGGACGGAACAAGACGAAAGAACGCCACCCGAGACGCCACCA
GCACCCTCAAGGCCTGGCTCAATGAACACAGGAAGAACCCGTACCCCACC
AAGGGCGAGAAGATCATGCTCGCAATCATCACCAAAATGACTCTAACTCA
GGTGTCCACATGGTTCGCGAACGCCAGGAGGAGACTCAAGAAGGAAAACA
AAATGACCTGGTCGCCAAGAAACAGGTGTGGAGACGAGAGGAGGGAAGAT
GGGAGCGACAACGAAGACGACGATGATGATGAAGACAGAAAAGATCGCGA
GGGAAACAGTGACGACGACAATCACGGAGGTAAGAGATTTATAGACGCAT
ATTTTACTGGGTCAGCATCTAGCTTGATTGGCCTGGTTGGAGAGATGAAA
GTTTATGTGTCCCAGTCGTAAGAAAATGGTTCAACTAATCCTATGCCAGT
GTAAATATTTTAGGTGATCCTGATCCCTCCAACATTTACTCCGTTTGACT
GAGCTCTACTCATACATCTTCCCGCTTCTTGCCATCTGTTACAGGGCTGG
AGGGAGACAGAGACAATAAGGAGTTGGATGTGGGAAATCCTTGTGAGGAA
AACCGACAGGAAGACAACACCAGCGGGTCAGTATCGGACTATCGGCCGCC
GCCCCAGTCCTCCAGCCCCGCTGATTCCCTGGGATCTATTAGTGCTGCAC
CGAGACCGGCCAGTCCCGAGCCCAGTCCCGCCGCGAACTCTGTACCGGTC
CCGCCGATTCCTTCCGAAAACAAGCCAAAGATCTGGTCCTTAGCCGACAC
GGCGACCTGCAGTAGCCCTGTCCCACGGCCGGACATAGTCAAGACGACAC
TACAAGGTCCCTTACACATGCAATTCTCACACCATAGACCCTTCGATTCC
GCGGTAACCAACCTACGGCAGTGGGTGGACGGAGTTTTCCACCGGCCGAT
CGGACCATTGCCTTCGGGCCCGATGGGACCTCTCACCGTGGCAACTCAGG
CGTCTGCCTCCGCAACGGTATCGGGAATGCACCCTAGCTCCAATCCGCAC
ACCACTCCCCCAGGATTCGTGTCGTCCCAGGAGAGGACCCCTGCCCTCCC
CATCGCACTCAGGACTCATGCTTCGCCAGCCAAAGACGGTGAGTTTAACC
TCAGCACTCAATAA Coding sequence (CDS) from alignment at Sc0000089:112142..114155+ >transcript:BL95663_evm1 ID=transcript:BL95663_evm1|Name=transcript:BL95663_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5112bp|location=Sequence derived from alignment at Sc0000089:112142..114155+ (Branchiostoma lanceolatum)
ATGTCCAGCCACGCCGCGTCGTGCTGCGAGGCCGGGCGGCCCATCATGTC
GGACCCGCACACCGGCCAGGCCGTGTGCTCCTGCCAGTACGAGGGCAGGG
TGGCCGGGCTGGTGCCGCCGCGGGTCGGTGAGATGTCCCTCAGCAGCGTG
TACGGCTCGCCGTACGCCGGCCAGGGCTACATCGCCTCCTTCGGTGCCGA
CCCGTCGGCCTTCTACTCGCCTTTGGCGAACCCGTACGACCCGTCGGCAG
GTCTGCAGCAGCCCACCGCCTACTACCCGTACGACCCGGCCACGCTAGCC
GCCGGCGCACAGTACCCATACGGCAGCTATGGCGCTATGGACGGAACAAG
ACGAAAGAACGCCACCCGAGACGCCACCAGCACCCTCAAGGCCTGGCTCA
ATGAACACAGGAAGAACCCGTACCCCACCAAGGGCGAGAAGATCATGCTC
GCAATCATCACCAAAATGACTCTAACTCAGGTGTCCACATGGTTCGCGAA
CGCCAGGAGGAGACTCAAGAAGGAAAACAAAATGACCTGGTCGCCAAGAA
ACAGGTGTGGAGACGAGAGGAGGGAAGATGGGAGCGACAACGAAGACGAC
GATGATGATGAAGACAGAAAAGATCGCGAGGGAAACAGTGACGACGACAA
TCACGGAGGGCTGGAGGGAGACAGAGACAATAAGGAGTTGGATGTGGGAA
ATCCTTGTGAGGAAAACCGACAGGAAGACAACACCAGCGGGTCAGTATCG
GACTATCGGCCGCCGCCCCAGTCCTCCAGCCCCGCTGATTCCCTGGGATC
TATTAGTGCTGCACCGAGACCGGCCAGTCCCGAGCCCAGTCCCGCCGCGA
ACTCTGTACCGGTCCCGCCGATTCCTTCCGAAAACAAGCCAAAGATCTGG
TCCTTAGCCGACACGGCGACCTGCAGTAGCCCTGTCCCACGGCCGGACAT
AGTCAAGACGACACTACAAGGTCCCTTACACATGCAATTCTCACACCATA
GACCCTTCGATTCCGCGGTAACCAACCTACGGCAGTGGGTGGACGGAGTT
TTCCACCGGCCGATCGGACCATTGCCTTCGGGCCCGATGGGACCTCTCAC
CGTGGCAACTCAGGCGTCTGCCTCCGCAACGGTATCGGGAATGCACCCTA
GCTCCAATCCGCACACCACTCCCCCAGGATTCGTGTCGTCCCAGGAGAGG
ACCCCTGCCCTCCCCATCGCACTCAGGACTCATGCTTCGCCAGCCAAAGA
CGGTGAGTTTAACCTCAGCACTCAATAAATGTCCAGCCACGCCGCGTCGT
GCTGCGAGGCCGGGCGGCCCATCATGTCGGACCCGCACACCGGCCAGGCC
GTGTGCTCCTGCCAGTACGAGGGCAGGGTGGCCGGGCTGGTGCCGCCGCG
GGTCGGTGAGATGTCCCTCAGCAGCGTGTACGGCTCGCCGTACGCCGGCC
AGGGCTACATCGCCTCCTTCGGTGCCGACCCGTCGGCCTTCTACTCGCCT
TTGGCGAACCCGTACGACCCGTCGGCAGGTCTGCAGCAGCCCACCGCCTA
CTACCCGTACGACCCGGCCACGCTAGCCGCCGGCGCACAGTACCCATACG
GCAGCTATGGCGCTATGGACGGAACAAGACGAAAGAACGCCACCCGAGAC
GCCACCAGCACCCTCAAGGCCTGGCTCAATGAACACAGGAAGAACCCGTA
CCCCACCAAGGGCGAGAAGATCATGCTCGCAATCATCACCAAAATGACTC
TAACTCAGGTGTCCACATGGTTCGCGAACGCCAGGAGGAGACTCAAGAAG
GAAAACAAAATGACCTGGTCGCCAAGAAACAGGTGTGGAGACGAGAGGAG
GGAAGATGGGAGCGACAACGAAGACGACGATGATGATGAAGACAGAAAAG
ATCGCGAGGGAAACAGTGACGACGACAATCACGGAGGGCTGGAGGGAGAC
AGAGACAATAAGGAGTTGGATGTGGGAAATCCTTGTGAGGAAAACCGACA
GGAAGACAACACCAGCGGGTCAGTATCGGACTATCGGCCGCCGCCCCAGT
CCTCCAGCCCCGCTGATTCCCTGGGATCTATTAGTGCTGCACCGAGACCG
GCCAGTCCCGAGCCCAGTCCCGCCGCGAACTCTGTACCGGTCCCGCCGAT
TCCTTCCGAAAACAAGCCAAAGATCTGGTCCTTAGCCGACACGGCGACCT
GCAGTAGCCCTGTCCCACGGCCGGACATAGTCAAGACGACACTACAAGGT
CCCTTACACATGCAATTCTCACACCATAGACCCTTCGATTCCGCGGTAAC
CAACCTACGGCAGTGGGTGGACGGAGTTTTCCACCGGCCGATCGGACCAT
TGCCTTCGGGCCCGATGGGACCTCTCACCGTGGCAACTCAGGCGTCTGCC
TCCGCAACGGTATCGGGAATGCACCCTAGCTCCAATCCGCACACCACTCC
CCCAGGATTCGTGTCGTCCCAGGAGAGGACCCCTGCCCTCCCCATCGCAC
TCAGGACTCATGCTTCGCCAGCCAAAGACGGTGAGTTTAACCTCAGCACT
CAATAAATGTCCAGCCACGCCGCGTCGTGCTGCGAGGCCGGGCGGCCCAT
CATGTCGGACCCGCACACCGGCCAGGCCGTGTGCTCCTGCCAGTACGAGG
GCAGGGTGGCCGGGCTGGTGCCGCCGCGGGTCGGTGAGATGTCCCTCAGC
AGCGTGTACGGCTCGCCGTACGCCGGCCAGGGCTACATCGCCTCCTTCGG
TGCCGACCCGTCGGCCTTCTACTCGCCTTTGGCGAACCCGTACGACCCGT
CGGCAGGTCTGCAGCAGCCCACCGCCTACTACCCGTACGACCCGGCCACG
CTAGCCGCCGGCGCACAGTACCCATACGGCAGCTATGGCGCTATGGACGG
AACAAGACGAAAGAACGCCACCCGAGACGCCACCAGCACCCTCAAGGCCT
GGCTCAATGAACACAGGAAGAACCCGTACCCCACCAAGGGCGAGAAGATC
ATGCTCGCAATCATCACCAAAATGACTCTAACTCAGGTGTCCACATGGTT
CGCGAACGCCAGGAGGAGACTCAAGAAGGAAAACAAAATGACCTGGTCGC
CAAGAAACAGGTGTGGAGACGAGAGGAGGGAAGATGGGAGCGACAACGAA
GACGACGATGATGATGAAGACAGAAAAGATCGCGAGGGAAACAGTGACGA
CGACAATCACGGAGGGCTGGAGGGAGACAGAGACAATAAGGAGTTGGATG
TGGGAAATCCTTGTGAGGAAAACCGACAGGAAGACAACACCAGCGGGTCA
GTATCGGACTATCGGCCGCCGCCCCAGTCCTCCAGCCCCGCTGATTCCCT
GGGATCTATTAGTGCTGCACCGAGACCGGCCAGTCCCGAGCCCAGTCCCG
CCGCGAACTCTGTACCGGTCCCGCCGATTCCTTCCGAAAACAAGCCAAAG
ATCTGGTCCTTAGCCGACACGGCGACCTGCAGTAGCCCTGTCCCACGGCC
GGACATAGTCAAGACGACACTACAAGGTCCCTTACACATGCAATTCTCAC
ACCATAGACCCTTCGATTCCGCGGTAACCAACCTACGGCAGTGGGTGGAC
GGAGTTTTCCACCGGCCGATCGGACCATTGCCTTCGGGCCCGATGGGACC
TCTCACCGTGGCAACTCAGGCGTCTGCCTCCGCAACGGTATCGGGAATGC
ACCCTAGCTCCAATCCGCACACCACTCCCCCAGGATTCGTGTCGTCCCAG
GAGAGGACCCCTGCCCTCCCCATCGCACTCAGGACTCATGCTTCGCCAGC
CAAAGACGGTGAGTTTAACCTCAGCACTCAATAAATGTCCAGCCACGCCG
CGTCGTGCTGCGAGGCCGGGCGGCCCATCATGTCGGACCCGCACACCGGC
CAGGCCGTGTGCTCCTGCCAGTACGAGGGCAGGGTGGCCGGGCTGGTGCC
GCCGCGGGTCGGTGAGATGTCCCTCAGCAGCGTGTACGGCTCGCCGTACG
CCGGCCAGGGCTACATCGCCTCCTTCGGTGCCGACCCGTCGGCCTTCTAC
TCGCCTTTGGCGAACCCGTACGACCCGTCGGCAGGTCTGCAGCAGCCCAC
CGCCTACTACCCGTACGACCCGGCCACGCTAGCCGCCGGCGCACAGTACC
CATACGGCAGCTATGGCGCTATGGACGGAACAAGACGAAAGAACGCCACC
CGAGACGCCACCAGCACCCTCAAGGCCTGGCTCAATGAACACAGGAAGAA
CCCGTACCCCACCAAGGGCGAGAAGATCATGCTCGCAATCATCACCAAAA
TGACTCTAACTCAGGTGTCCACATGGTTCGCGAACGCCAGGAGGAGACTC
AAGAAGGAAAACAAAATGACCTGGTCGCCAAGAAACAGGTGTGGAGACGA
GAGGAGGGAAGATGGGAGCGACAACGAAGACGACGATGATGATGAAGACA
GAAAAGATCGCGAGGGAAACAGTGACGACGACAATCACGGAGGGCTGGAG
GGAGACAGAGACAATAAGGAGTTGGATGTGGGAAATCCTTGTGAGGAAAA
CCGACAGGAAGACAACACCAGCGGGTCAGTATCGGACTATCGGCCGCCGC
CCCAGTCCTCCAGCCCCGCTGATTCCCTGGGATCTATTAGTGCTGCACCG
AGACCGGCCAGTCCCGAGCCCAGTCCCGCCGCGAACTCTGTACCGGTCCC
GCCGATTCCTTCCGAAAACAAGCCAAAGATCTGGTCCTTAGCCGACACGG
CGACCTGCAGTAGCCCTGTCCCACGGCCGGACATAGTCAAGACGACACTA
CAAGGTCCCTTACACATGCAATTCTCACACCATAGACCCTTCGATTCCGC
GGTAACCAACCTACGGCAGTGGGTGGACGGAGTTTTCCACCGGCCGATCG
GACCATTGCCTTCGGGCCCGATGGGACCTCTCACCGTGGCAACTCAGGCG
TCTGCCTCCGCAACGGTATCGGGAATGCACCCTAGCTCCAATCCGCACAC
CACTCCCCCAGGATTCGTGTCGTCCCAGGAGAGGACCCCTGCCCTCCCCA
TCGCACTCAGGACTCATGCTTCGCCAGCCAAAGACGGTGAGTTTAACCTC
AGCACTCAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000089 | genome | Sc0000089:112142..114155 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95663_evm1 |
| Biotype | protein_coding |
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