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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95661_evm1 >transcript:BL95661_evm1-protein ID=transcript:BL95661_evm1-protein|Name=transcript:BL95661_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=223bp
MRVDALPSGEVSDEDTLRKLFATQPNNVVEQQTSDGKISRQAVKDVTIAG
SYGVLFAFIAVLTRQVTDTGVTAFQELSALLMALGLVLWSKTDLRPASLR
ILGQLVLQGVGKYLVFVSLVAAIMYLPPANAAAITKSALPLFIGIGAYVL
LQQTEFSGVFWNRPLHCRNFSGSATWYVTMVLQQNLFFVSVETEFSGVFR
RRPLHCRNRSSGLRFLEKHRNVT Run BLAST on NCBI mRNA from alignment at Sc0000087:242379..244614- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95661_evm1 ID=transcript:BL95661_evm1|Name=transcript:BL95661_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2236bp|location=Sequence derived from alignment at Sc0000087:242379..244614- (Branchiostoma lanceolatum)
ATGCGGGTTGATGCGCTCCCTAGCGGAGAGGTCAGCGATGAGGACACCTT
GCGGAAACTGTTTGCAACGCAACCAAATAATGTCGTCGAGCAGCAGACTT
CGGATGGGAAAATTTCACGGCAGGTACAACGTACATGACGTACTTCTGGG
ACGTGTAATGTGCGCAAGGCTTAGGCCATGTTGATTTGATGATAAGGATG
ACATCCTCTGGAAACCCCAAAACTGATGCGAGCGTGCAGAAAAAAAGTTT
AACTAAAAAAAAGGTTGCCTTCATTAGAAAATCGACGTGGTCAGGAAGGT
TGAACAAATGACTAAAAACACAGAGCATGGTAAACCAGATAATTGATTTT
TCATTTTTGGTCTTTCACATCTTCTTCTTTGAGCAAGAAAATTTAGATCA
TAGTATTCATTTTCCAAAATATCTTTTTGCAATTTACGGCACATATTTGC
TCATATTGTAGCTGCTTTGCCCAATTTACTGTATGGTAGAAAACTTTTTC
TTTTGGAAATGGACGAAAATTGATGCGCGCGTGGATGTCATCCATATAAT
GAAATCAACATGGCCTTTTCATGTAAGACTCGTGAATCTATCTCGAAAAG
TCTCATCATACACAAACTTCAAGTTCCCTTAAAAGTCGGTATCGATTGTT
ACATATGTGTGATTCTTGTGTTGTGTTGATGGCTTTTTACAGGCGGTAAA
AGACGTTACCATCGCGGGGTCTTACGGAGTACTTTTCGCGTTCATCGCCG
TCCTGACGCGGCAGGTAACGGATACCGGGGTGACGGCGTTTCAGGTTTGT
TGATTTTATTAAACAAACAAGTAAACAAACAGAAATAAACAAAATTTGTT
ATCTAGGACAAATGCCCGAGGGGCCTGGATGACTAACTTTCCACCATTGC
ACACCTGTTCACACATTAATTCTTGTACGATTCCTAGAATTCTTGCAAAC
TGCACACAATACTATACCATTAGCCTCGCCTCTGAGCTGTCGCCAAAAAT
ACACAGTCCTCTGGGATGGTCCTTCAGGCTCCAGACAGCAGACAGGCGAC
CATTCAATTTAGCGTCAACTGTGGAGTCCCCCTCGAGCGTTTAATCAGGC
ATATGGTACTGAAGTGCCAACTGGCGATCTGTGACAGTACTACAACCTTA
AACTTCTGACACAATATCTTACAACGCGTGTTTCAGCTTGTCTTCATACA
GGAGCTCAGCGCACTTCTCATGGCGCTGGGGCTCGTCCTGTGGTCTAAGA
CGGACCTCAGACCGGCGAGTCTGCGGATCTTGGGGCAGCTGGTACTTCAA
GGGGTCGGCAAGTATCTCGTGTTTGTCTCTCTGGTTGCTGCCATCATGTA
TCTACCCCCCGCGAACGCCGCTGCCATCACCAAGTCTGCACTACCGCTCT
TCATTGGTATAGGGGCATATGTTCTTCTTCAACAGGTGTGTTTTTATTAT
GTATATTACCTGGGAAAAAGCGTTCGTGTGATCCTTCCTCCCTTTCTTCG
TTCCTTCCTTTTTCTTTCTTTCCTTCCCCTATCTTTCCTTTTATCCAGGT
ATCTTTCTTTCTTAGTCCTTCCTTTCTGCCTTCTTTCCTTCTATCTTTCC
ATCCTTTCTTCGATCCTACCTTTCTACCTTCCTTCATTCGATATTTCCTC
CCTTCCTTTCTACCTTCATTCCTTCCTTCTGTTCTTCCTTCCTTCCTTCT
ATTTTTCTTGCTTATCCATCCTTCCTTCTTACCATCCTACCTTCCTTCAA
TTTTACCTTCCTTCGATCCTTTCTTTCCTTCTCCCTTTCTTCCGTCGAGC
CCTCCTTCCGTCCGTTGTGTATGTATGTATGTGTGTGTGTGTGTTTGTGT
GTGTGAGTTTGTGTGTGTGTGTTTTTGTGTTTGTGTGTGTGTGTGTTTGC
TTTTGTGTGTGTTTGCTTTTGTGTGTGAGTGTGTGTGTGTTTACGTCTCT
GTGTGTTTCTTTAAATTCACACGTGGAAACTCTAAATCTGAATTGTCCGA
TTGCAGTGTTTGTTTCTGTACAGACCGAGTTTAGCGGCGTGTTTTGGAAC
CGTCCTCTGCACTGCAGGAATTTTTCTGGTAGCGCCACCTGGTATGTGAC
CATGGTATTGCAGCAGAACCTCTTTTTTGTTTCTGTAGAGACCGAGTTCA
GCGGCGTGTTTCGGAGGCGCCCTCTGCACTGCAGGAATCGTTCTAGTGGC
CTTCGGTTCCTGGAAAAACATCGGAACGTCACGTGA Coding sequence (CDS) from alignment at Sc0000087:242379..244614- >transcript:BL95661_evm1 ID=transcript:BL95661_evm1|Name=transcript:BL95661_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2688bp|location=Sequence derived from alignment at Sc0000087:242379..244614- (Branchiostoma lanceolatum)
ATGCGGGTTGATGCGCTCCCTAGCGGAGAGGTCAGCGATGAGGACACCTT
GCGGAAACTGTTTGCAACGCAACCAAATAATGTCGTCGAGCAGCAGACTT
CGGATGGGAAAATTTCACGGCAGGCGGTAAAAGACGTTACCATCGCGGGG
TCTTACGGAGTACTTTTCGCGTTCATCGCCGTCCTGACGCGGCAGGTAAC
GGATACCGGGGTGACGGCGTTTCAGGAGCTCAGCGCACTTCTCATGGCGC
TGGGGCTCGTCCTGTGGTCTAAGACGGACCTCAGACCGGCGAGTCTGCGG
ATCTTGGGGCAGCTGGTACTTCAAGGGGTCGGCAAGTATCTCGTGTTTGT
CTCTCTGGTTGCTGCCATCATGTATCTACCCCCCGCGAACGCCGCTGCCA
TCACCAAGTCTGCACTACCGCTCTTCATTGGTATAGGGGCATATGTTCTT
CTTCAACAGACCGAGTTTAGCGGCGTGTTTTGGAACCGTCCTCTGCACTG
CAGGAATTTTTCTGGTAGCGCCACCTGGTATGTGACCATGGTATTGCAGC
AGAACCTCTTTTTTGTTTCTGTAGAGACCGAGTTCAGCGGCGTGTTTCGG
AGGCGCCCTCTGCACTGCAGGAATCGTTCTAGTGGCCTTCGGTTCCTGGA
AAAACATCGGAACGTCACGTGAATGCGGGTTGATGCGCTCCCTAGCGGAG
AGGTCAGCGATGAGGACACCTTGCGGAAACTGTTTGCAACGCAACCAAAT
AATGTCGTCGAGCAGCAGACTTCGGATGGGAAAATTTCACGGCAGGCGGT
AAAAGACGTTACCATCGCGGGGTCTTACGGAGTACTTTTCGCGTTCATCG
CCGTCCTGACGCGGCAGGTAACGGATACCGGGGTGACGGCGTTTCAGGAG
CTCAGCGCACTTCTCATGGCGCTGGGGCTCGTCCTGTGGTCTAAGACGGA
CCTCAGACCGGCGAGTCTGCGGATCTTGGGGCAGCTGGTACTTCAAGGGG
TCGGCAAGTATCTCGTGTTTGTCTCTCTGGTTGCTGCCATCATGTATCTA
CCCCCCGCGAACGCCGCTGCCATCACCAAGTCTGCACTACCGCTCTTCAT
TGGTATAGGGGCATATGTTCTTCTTCAACAGACCGAGTTTAGCGGCGTGT
TTTGGAACCGTCCTCTGCACTGCAGGAATTTTTCTGGTAGCGCCACCTGG
TATGTGACCATGGTATTGCAGCAGAACCTCTTTTTTGTTTCTGTAGAGAC
CGAGTTCAGCGGCGTGTTTCGGAGGCGCCCTCTGCACTGCAGGAATCGTT
CTAGTGGCCTTCGGTTCCTGGAAAAACATCGGAACGTCACGTGAATGCGG
GTTGATGCGCTCCCTAGCGGAGAGGTCAGCGATGAGGACACCTTGCGGAA
ACTGTTTGCAACGCAACCAAATAATGTCGTCGAGCAGCAGACTTCGGATG
GGAAAATTTCACGGCAGGCGGTAAAAGACGTTACCATCGCGGGGTCTTAC
GGAGTACTTTTCGCGTTCATCGCCGTCCTGACGCGGCAGGTAACGGATAC
CGGGGTGACGGCGTTTCAGGAGCTCAGCGCACTTCTCATGGCGCTGGGGC
TCGTCCTGTGGTCTAAGACGGACCTCAGACCGGCGAGTCTGCGGATCTTG
GGGCAGCTGGTACTTCAAGGGGTCGGCAAGTATCTCGTGTTTGTCTCTCT
GGTTGCTGCCATCATGTATCTACCCCCCGCGAACGCCGCTGCCATCACCA
AGTCTGCACTACCGCTCTTCATTGGTATAGGGGCATATGTTCTTCTTCAA
CAGACCGAGTTTAGCGGCGTGTTTTGGAACCGTCCTCTGCACTGCAGGAA
TTTTTCTGGTAGCGCCACCTGGTATGTGACCATGGTATTGCAGCAGAACC
TCTTTTTTGTTTCTGTAGAGACCGAGTTCAGCGGCGTGTTTCGGAGGCGC
CCTCTGCACTGCAGGAATCGTTCTAGTGGCCTTCGGTTCCTGGAAAAACA
TCGGAACGTCACGTGAATGCGGGTTGATGCGCTCCCTAGCGGAGAGGTCA
GCGATGAGGACACCTTGCGGAAACTGTTTGCAACGCAACCAAATAATGTC
GTCGAGCAGCAGACTTCGGATGGGAAAATTTCACGGCAGGCGGTAAAAGA
CGTTACCATCGCGGGGTCTTACGGAGTACTTTTCGCGTTCATCGCCGTCC
TGACGCGGCAGGTAACGGATACCGGGGTGACGGCGTTTCAGGAGCTCAGC
GCACTTCTCATGGCGCTGGGGCTCGTCCTGTGGTCTAAGACGGACCTCAG
ACCGGCGAGTCTGCGGATCTTGGGGCAGCTGGTACTTCAAGGGGTCGGCA
AGTATCTCGTGTTTGTCTCTCTGGTTGCTGCCATCATGTATCTACCCCCC
GCGAACGCCGCTGCCATCACCAAGTCTGCACTACCGCTCTTCATTGGTAT
AGGGGCATATGTTCTTCTTCAACAGACCGAGTTTAGCGGCGTGTTTTGGA
ACCGTCCTCTGCACTGCAGGAATTTTTCTGGTAGCGCCACCTGGTATGTG
ACCATGGTATTGCAGCAGAACCTCTTTTTTGTTTCTGTAGAGACCGAGTT
CAGCGGCGTGTTTCGGAGGCGCCCTCTGCACTGCAGGAATCGTTCTAGTG
GCCTTCGGTTCCTGGAAAAACATCGGAACGTCACGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000087 | genome | Sc0000087:242379..244614 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95661_evm1 |
| Biotype | protein_coding |
|
