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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95654_evm1 >transcript:BL95654_evm1-protein ID=transcript:BL95654_evm1-protein|Name=transcript:BL95654_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=490bp
MGTLCRRKPGRPVDPPDGGWGWMVALAGFVVSACSYGVMRSLGVFFVTWQ
DYFSVTAAETGLIQSIITGVLNLAAPIAGALSNRFGCRVVVMAGGVISSA
GFLLSLWATSLFHIYVTVGFLTGFGYSLSLITTMATIGRYFTTHRLRANS
IAAIGASFVSFAFPPLFQYLMDEYTWRGALVIIGGIVLQVAGFGALERPI
LLKGDVTADKSSENVQESSPQSSRFPDKINVNVTTEKHSLTKVILGKISS
VIDITLLTEPRFLVFCVAVFLFGFGRFVPNIYIVPRARAFGVEEYPSAFL
LSILAIGDIIGRASVGLLPEWPRFRRVDQYAMNTFLMGFITLFAPLAKTY
VTMAVYSGFYGLLMGGCVPLLYSAIAEIGGANRMSSALGIIMFLRGIGNL
AGPPFSGWLRDITGSFDATLLEGGSCLVLAGLLPFVLHLRVFQPTKPEGK
VEEHEIDGTRLSLLATEREESNTASTQGHETSVVIKETAL Run BLAST on NCBI mRNA from alignment at Sc0000086:1058418..1060691+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95654_evm1 ID=transcript:BL95654_evm1|Name=transcript:BL95654_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2274bp|location=Sequence derived from alignment at Sc0000086:1058418..1060691+ (Branchiostoma lanceolatum)
ATGGGTACTTTGTGTAGAAGGAAGCCGGGACGGCCCGTTGATCCACCGGA
CGGGGGATGGGGGTGGATGGTCGCCCTGGCCGGTTTTGTTGTGAGCGCAT
GCTCGTACGGAGTGATGCGGTCCCTCGGAGTGTTCTTCGTGACTTGGCAG
GACTACTTTTCTGTGACCGCCGCTGAAACTGGCCTTATACAGTCTATCAT
CACCGGTGTTTTAAACCTGGCAGGTGAGGAAAGAAACCTACACATCATCA
TACAAAAGTGAAATCTTATCGTCTTCCACAAATATCGGACGCAATAAACA
ATGCAATGTAAACCTACTGTTCAAATACATGTATCTTCAATATTTTGTAT
GAGAGCATATTCAATGGTGACACCGTGACAGTAAGATATACCACATAGCA
TACCACAAACTATAACATTTTATAATCACACATCTGCCACCCCTTCCGGC
AGCACCAATCGCGGGAGCTCTGAGCAACAGGTTCGGGTGCAGAGTTGTGG
TCATGGCCGGCGGAGTGATATCTTCGGCAGGATTCTTGCTCAGTCTTTGG
GCCACATCACTCTTTCATATCTACGTTACCGTTGGGTTTCTGACAGGTTT
GTCCCACTATAAACTATATTTGTCTTACCTGCAAACATAGTTCTGGCCTG
TTGACTATATGTTGACGTACTGAAAATTGCTTTAACATCATTGATTAGAT
CTTATATGGATTGTGGACTGATGCATTCAAGTGTAGACTAATGTTATAAC
ATAAAAAATCGAAATTATGCTGTATAACTGCATCTTATTAAATTCGATAA
TCCTGCGGTGTTTACGCTTTATCACATATTTAGGTTGAAAAAATTTTCTG
TTCCCAATCCGCAGGGTTTGGATACTCCCTATCCTTGATCACTACCATGG
CAACAATAGGACGATATTTCACCACTCACAGACTTCGCGCCAACAGTATC
GCGGCTATAGGTGCCAGCTTTGTGTCTTTCGCGTTCCCTCCACTATTCCA
GTACCTCATGGACGAGTACACTTGGAGGGGTGCTTTAGTTATAATCGGAG
GGATCGTTCTTCAGGTAGCCGGGTTTGGGGCATTGGAACGACCCATTTTG
CTAAAAGGCGACGTCACCGCGGATAAAAGTTCGGAAAACGTCCAAGAATC
TTCACCACAAAGTAGTAGATTTCCAGACAAGATAAATGTAAACGTCACGA
CAGAGAAGCATTCTTTAACCAAAGTTATCTTAGGTAAGATAAGTTCCGTC
ATAGACATTACGCTGCTGACAGAGCCACGGTTCTTAGTGTTTTGCGTGGC
CGTTTTTTTGTTCGGATTCGGTCGGTTTGTTCCTAATATCTACATCGTTC
CACGCGCACGGGCCTTCGGTGTCGAAGAATACCCCTCAGCCTTTCTGCTG
TCCATCCTCGCCATAGGAGACATCATCGGCCGAGCGTCGGTAGGTCTACT
GCCGGAGTGGCCGAGGTTCAGGCGTGTGGATCAGTACGCCATGAACACGT
TCCTTATGGGCTTCATCACCCTGTTCGCCCCTCTTGCTAAGACCTACGTC
ACCATGGCAGTGTACAGCGGGTTCTATGGTTTACTCATGGGCGGGTGTGT
GCCGCTCTTGTATTCTGCCATTGCAGAAATCGGGGGAGCCAACAGGATGT
CGAGTGCTCTTGGGATCATCATGTTCTTGCGAGGGATAGGAAACCTTGCA
GGACCACCTTTTTCAGGTGAATATTCTTTTTAGTCAGATGTTCACATATC
ATGATATAATTGTCCATGTCAGTCTACCATTAGTAGCAGCACCTATACTT
GGTCTACGCTATATACGCATGATGGCGAATTGATGGTTCACTGTCTGTGG
TTTATTCGTAACGTAAATCTTTATTCTATTTCTTCATTGATTTCTAGCAG
ATCGTCATTTTGTATGCTAACAATATACCTAGCTGACGTGTAATGTCATC
TTGATGATTTTGCTTGAAATGATTGCCGTTTTTATGATGTTGCATTTTTG
TCTTTATTTGTATCGAACAGGGTGGCTACGGGACATCACAGGCAGTTTCG
ACGCGACACTGCTGGAAGGCGGAAGCTGCTTGGTACTTGCGGGACTGTTG
CCGTTTGTACTTCACCTGCGCGTGTTCCAACCCACGAAACCGGAGGGCAA
AGTTGAGGAACATGAAATTGACGGTACCAGACTATCTCTGTTGGCTACAG
AGCGCGAGGAATCAAACACAGCCTCTACTCAAGGTCATGAAACATCGGTT
GTCATAAAAGAAACGGCCTTGTGA Coding sequence (CDS) from alignment at Sc0000086:1058418..1060691+ >transcript:BL95654_evm1 ID=transcript:BL95654_evm1|Name=transcript:BL95654_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5892bp|location=Sequence derived from alignment at Sc0000086:1058418..1060691+ (Branchiostoma lanceolatum)
ATGGGTACTTTGTGTAGAAGGAAGCCGGGACGGCCCGTTGATCCACCGGA
CGGGGGATGGGGGTGGATGGTCGCCCTGGCCGGTTTTGTTGTGAGCGCAT
GCTCGTACGGAGTGATGCGGTCCCTCGGAGTGTTCTTCGTGACTTGGCAG
GACTACTTTTCTGTGACCGCCGCTGAAACTGGCCTTATACAGTCTATCAT
CACCGGTGTTTTAAACCTGGCAGCACCAATCGCGGGAGCTCTGAGCAACA
GGTTCGGGTGCAGAGTTGTGGTCATGGCCGGCGGAGTGATATCTTCGGCA
GGATTCTTGCTCAGTCTTTGGGCCACATCACTCTTTCATATCTACGTTAC
CGTTGGGTTTCTGACAGGGTTTGGATACTCCCTATCCTTGATCACTACCA
TGGCAACAATAGGACGATATTTCACCACTCACAGACTTCGCGCCAACAGT
ATCGCGGCTATAGGTGCCAGCTTTGTGTCTTTCGCGTTCCCTCCACTATT
CCAGTACCTCATGGACGAGTACACTTGGAGGGGTGCTTTAGTTATAATCG
GAGGGATCGTTCTTCAGGTAGCCGGGTTTGGGGCATTGGAACGACCCATT
TTGCTAAAAGGCGACGTCACCGCGGATAAAAGTTCGGAAAACGTCCAAGA
ATCTTCACCACAAAGTAGTAGATTTCCAGACAAGATAAATGTAAACGTCA
CGACAGAGAAGCATTCTTTAACCAAAGTTATCTTAGGTAAGATAAGTTCC
GTCATAGACATTACGCTGCTGACAGAGCCACGGTTCTTAGTGTTTTGCGT
GGCCGTTTTTTTGTTCGGATTCGGTCGGTTTGTTCCTAATATCTACATCG
TTCCACGCGCACGGGCCTTCGGTGTCGAAGAATACCCCTCAGCCTTTCTG
CTGTCCATCCTCGCCATAGGAGACATCATCGGCCGAGCGTCGGTAGGTCT
ACTGCCGGAGTGGCCGAGGTTCAGGCGTGTGGATCAGTACGCCATGAACA
CGTTCCTTATGGGCTTCATCACCCTGTTCGCCCCTCTTGCTAAGACCTAC
GTCACCATGGCAGTGTACAGCGGGTTCTATGGTTTACTCATGGGCGGGTG
TGTGCCGCTCTTGTATTCTGCCATTGCAGAAATCGGGGGAGCCAACAGGA
TGTCGAGTGCTCTTGGGATCATCATGTTCTTGCGAGGGATAGGAAACCTT
GCAGGACCACCTTTTTCAGGGTGGCTACGGGACATCACAGGCAGTTTCGA
CGCGACACTGCTGGAAGGCGGAAGCTGCTTGGTACTTGCGGGACTGTTGC
CGTTTGTACTTCACCTGCGCGTGTTCCAACCCACGAAACCGGAGGGCAAA
GTTGAGGAACATGAAATTGACGGTACCAGACTATCTCTGTTGGCTACAGA
GCGCGAGGAATCAAACACAGCCTCTACTCAAGGTCATGAAACATCGGTTG
TCATAAAAGAAACGGCCTTGTGAATGGGTACTTTGTGTAGAAGGAAGCCG
GGACGGCCCGTTGATCCACCGGACGGGGGATGGGGGTGGATGGTCGCCCT
GGCCGGTTTTGTTGTGAGCGCATGCTCGTACGGAGTGATGCGGTCCCTCG
GAGTGTTCTTCGTGACTTGGCAGGACTACTTTTCTGTGACCGCCGCTGAA
ACTGGCCTTATACAGTCTATCATCACCGGTGTTTTAAACCTGGCAGCACC
AATCGCGGGAGCTCTGAGCAACAGGTTCGGGTGCAGAGTTGTGGTCATGG
CCGGCGGAGTGATATCTTCGGCAGGATTCTTGCTCAGTCTTTGGGCCACA
TCACTCTTTCATATCTACGTTACCGTTGGGTTTCTGACAGGGTTTGGATA
CTCCCTATCCTTGATCACTACCATGGCAACAATAGGACGATATTTCACCA
CTCACAGACTTCGCGCCAACAGTATCGCGGCTATAGGTGCCAGCTTTGTG
TCTTTCGCGTTCCCTCCACTATTCCAGTACCTCATGGACGAGTACACTTG
GAGGGGTGCTTTAGTTATAATCGGAGGGATCGTTCTTCAGGTAGCCGGGT
TTGGGGCATTGGAACGACCCATTTTGCTAAAAGGCGACGTCACCGCGGAT
AAAAGTTCGGAAAACGTCCAAGAATCTTCACCACAAAGTAGTAGATTTCC
AGACAAGATAAATGTAAACGTCACGACAGAGAAGCATTCTTTAACCAAAG
TTATCTTAGGTAAGATAAGTTCCGTCATAGACATTACGCTGCTGACAGAG
CCACGGTTCTTAGTGTTTTGCGTGGCCGTTTTTTTGTTCGGATTCGGTCG
GTTTGTTCCTAATATCTACATCGTTCCACGCGCACGGGCCTTCGGTGTCG
AAGAATACCCCTCAGCCTTTCTGCTGTCCATCCTCGCCATAGGAGACATC
ATCGGCCGAGCGTCGGTAGGTCTACTGCCGGAGTGGCCGAGGTTCAGGCG
TGTGGATCAGTACGCCATGAACACGTTCCTTATGGGCTTCATCACCCTGT
TCGCCCCTCTTGCTAAGACCTACGTCACCATGGCAGTGTACAGCGGGTTC
TATGGTTTACTCATGGGCGGGTGTGTGCCGCTCTTGTATTCTGCCATTGC
AGAAATCGGGGGAGCCAACAGGATGTCGAGTGCTCTTGGGATCATCATGT
TCTTGCGAGGGATAGGAAACCTTGCAGGACCACCTTTTTCAGGGTGGCTA
CGGGACATCACAGGCAGTTTCGACGCGACACTGCTGGAAGGCGGAAGCTG
CTTGGTACTTGCGGGACTGTTGCCGTTTGTACTTCACCTGCGCGTGTTCC
AACCCACGAAACCGGAGGGCAAAGTTGAGGAACATGAAATTGACGGTACC
AGACTATCTCTGTTGGCTACAGAGCGCGAGGAATCAAACACAGCCTCTAC
TCAAGGTCATGAAACATCGGTTGTCATAAAAGAAACGGCCTTGTGAATGG
GTACTTTGTGTAGAAGGAAGCCGGGACGGCCCGTTGATCCACCGGACGGG
GGATGGGGGTGGATGGTCGCCCTGGCCGGTTTTGTTGTGAGCGCATGCTC
GTACGGAGTGATGCGGTCCCTCGGAGTGTTCTTCGTGACTTGGCAGGACT
ACTTTTCTGTGACCGCCGCTGAAACTGGCCTTATACAGTCTATCATCACC
GGTGTTTTAAACCTGGCAGCACCAATCGCGGGAGCTCTGAGCAACAGGTT
CGGGTGCAGAGTTGTGGTCATGGCCGGCGGAGTGATATCTTCGGCAGGAT
TCTTGCTCAGTCTTTGGGCCACATCACTCTTTCATATCTACGTTACCGTT
GGGTTTCTGACAGGGTTTGGATACTCCCTATCCTTGATCACTACCATGGC
AACAATAGGACGATATTTCACCACTCACAGACTTCGCGCCAACAGTATCG
CGGCTATAGGTGCCAGCTTTGTGTCTTTCGCGTTCCCTCCACTATTCCAG
TACCTCATGGACGAGTACACTTGGAGGGGTGCTTTAGTTATAATCGGAGG
GATCGTTCTTCAGGTAGCCGGGTTTGGGGCATTGGAACGACCCATTTTGC
TAAAAGGCGACGTCACCGCGGATAAAAGTTCGGAAAACGTCCAAGAATCT
TCACCACAAAGTAGTAGATTTCCAGACAAGATAAATGTAAACGTCACGAC
AGAGAAGCATTCTTTAACCAAAGTTATCTTAGGTAAGATAAGTTCCGTCA
TAGACATTACGCTGCTGACAGAGCCACGGTTCTTAGTGTTTTGCGTGGCC
GTTTTTTTGTTCGGATTCGGTCGGTTTGTTCCTAATATCTACATCGTTCC
ACGCGCACGGGCCTTCGGTGTCGAAGAATACCCCTCAGCCTTTCTGCTGT
CCATCCTCGCCATAGGAGACATCATCGGCCGAGCGTCGGTAGGTCTACTG
CCGGAGTGGCCGAGGTTCAGGCGTGTGGATCAGTACGCCATGAACACGTT
CCTTATGGGCTTCATCACCCTGTTCGCCCCTCTTGCTAAGACCTACGTCA
CCATGGCAGTGTACAGCGGGTTCTATGGTTTACTCATGGGCGGGTGTGTG
CCGCTCTTGTATTCTGCCATTGCAGAAATCGGGGGAGCCAACAGGATGTC
GAGTGCTCTTGGGATCATCATGTTCTTGCGAGGGATAGGAAACCTTGCAG
GACCACCTTTTTCAGGGTGGCTACGGGACATCACAGGCAGTTTCGACGCG
ACACTGCTGGAAGGCGGAAGCTGCTTGGTACTTGCGGGACTGTTGCCGTT
TGTACTTCACCTGCGCGTGTTCCAACCCACGAAACCGGAGGGCAAAGTTG
AGGAACATGAAATTGACGGTACCAGACTATCTCTGTTGGCTACAGAGCGC
GAGGAATCAAACACAGCCTCTACTCAAGGTCATGAAACATCGGTTGTCAT
AAAAGAAACGGCCTTGTGAATGGGTACTTTGTGTAGAAGGAAGCCGGGAC
GGCCCGTTGATCCACCGGACGGGGGATGGGGGTGGATGGTCGCCCTGGCC
GGTTTTGTTGTGAGCGCATGCTCGTACGGAGTGATGCGGTCCCTCGGAGT
GTTCTTCGTGACTTGGCAGGACTACTTTTCTGTGACCGCCGCTGAAACTG
GCCTTATACAGTCTATCATCACCGGTGTTTTAAACCTGGCAGCACCAATC
GCGGGAGCTCTGAGCAACAGGTTCGGGTGCAGAGTTGTGGTCATGGCCGG
CGGAGTGATATCTTCGGCAGGATTCTTGCTCAGTCTTTGGGCCACATCAC
TCTTTCATATCTACGTTACCGTTGGGTTTCTGACAGGGTTTGGATACTCC
CTATCCTTGATCACTACCATGGCAACAATAGGACGATATTTCACCACTCA
CAGACTTCGCGCCAACAGTATCGCGGCTATAGGTGCCAGCTTTGTGTCTT
TCGCGTTCCCTCCACTATTCCAGTACCTCATGGACGAGTACACTTGGAGG
GGTGCTTTAGTTATAATCGGAGGGATCGTTCTTCAGGTAGCCGGGTTTGG
GGCATTGGAACGACCCATTTTGCTAAAAGGCGACGTCACCGCGGATAAAA
GTTCGGAAAACGTCCAAGAATCTTCACCACAAAGTAGTAGATTTCCAGAC
AAGATAAATGTAAACGTCACGACAGAGAAGCATTCTTTAACCAAAGTTAT
CTTAGGTAAGATAAGTTCCGTCATAGACATTACGCTGCTGACAGAGCCAC
GGTTCTTAGTGTTTTGCGTGGCCGTTTTTTTGTTCGGATTCGGTCGGTTT
GTTCCTAATATCTACATCGTTCCACGCGCACGGGCCTTCGGTGTCGAAGA
ATACCCCTCAGCCTTTCTGCTGTCCATCCTCGCCATAGGAGACATCATCG
GCCGAGCGTCGGTAGGTCTACTGCCGGAGTGGCCGAGGTTCAGGCGTGTG
GATCAGTACGCCATGAACACGTTCCTTATGGGCTTCATCACCCTGTTCGC
CCCTCTTGCTAAGACCTACGTCACCATGGCAGTGTACAGCGGGTTCTATG
GTTTACTCATGGGCGGGTGTGTGCCGCTCTTGTATTCTGCCATTGCAGAA
ATCGGGGGAGCCAACAGGATGTCGAGTGCTCTTGGGATCATCATGTTCTT
GCGAGGGATAGGAAACCTTGCAGGACCACCTTTTTCAGGGTGGCTACGGG
ACATCACAGGCAGTTTCGACGCGACACTGCTGGAAGGCGGAAGCTGCTTG
GTACTTGCGGGACTGTTGCCGTTTGTACTTCACCTGCGCGTGTTCCAACC
CACGAAACCGGAGGGCAAAGTTGAGGAACATGAAATTGACGGTACCAGAC
TATCTCTGTTGGCTACAGAGCGCGAGGAATCAAACACAGCCTCTACTCAA
GGTCATGAAACATCGGTTGTCATAAAAGAAACGGCCTTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:1058418..1060691 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95654_evm1 |
| Biotype | protein_coding |
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