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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95639_evm0 >transcript:BL95639_evm0-protein ID=transcript:BL95639_evm0-protein|Name=transcript:BL95639_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=571bp
MERLEQEPDYIRHICYWVQSVTVHVQNPNPHIFIVGTHTNSLPIERTKIL
SSKVNKALLSNEKFAQSIVGKPNNNKDVLFCVENSLPLRQDPQARLLRNT
IMEVAASSFQSKRHVPIKWLKVSDFVNKYKSSYTDTCLMDKRTLFDKMSQ
EGVVEAEDDGEEFEEILKFYDEIGEVKVMDDVVVLNLKALVQLVIELVEL
DCDDHELGIVHVSSLRIVWTFLTAENFLSTITLFERYDILCPISQEQYLV
PLLLKTSDEKRAEKGKQEETDQGSAAFWNTTESDTVLYFKFYKFHPEAIF
LRLLARCLSMSQKTHDLGRGADRDVYRNVGRFYQGHDFYYKVELLCASVE
QNMIQVTVKCAPNRGPHSLLSRLHKDLQQIRGRDFPYLNYTVGLPCPACS
FDCSREGGREVATPHILRVAGHDEDLPRPGEKITLMCRGKAFEVDLGEHK
PTLDAARPMKTGESSRTSEQKGSIGLLNPKTTQHLSILLDPPAPIFGNNW
RALAGELGLCFQDICYIETKHNPTEMVLEMYHKNTPTANNDQIHRALLDI
DRPDAAEVIQPNSVESQETAQ Run BLAST on NCBI mRNA from alignment at Sc0000080:147049..149781+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95639_evm0 ID=transcript:BL95639_evm0|Name=transcript:BL95639_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2733bp|location=Sequence derived from alignment at Sc0000080:147049..149781+ (Branchiostoma lanceolatum)
ATGGAACGATTAGAACAGGAGCCAGACTACATCAGGCATATTTGCTACTG
GGTTCAGTCTGTGACAGTCCACGTACAAAACCCCAACCCTCACATCTTCA
TTGTTGGAACGCATACAAACAGTTTGCCGATAGAGAGAACAAAGATTCTG
TCCAGCAAGGTGAACAAGGCATTGCTTAGCAATGAAAAGTTTGCTCAGTC
TATTGTAGGAAAACCAAACAACAACAAAGACGTTCTATTCTGTGTGGAGA
ACTCTCTACCACTTCGTCAAGATCCCCAGGCGCGTCTCCTTCGAAACACC
ATCATGGAAGTCGCCGCTTCGTCGTTCCAATCCAAGAGACACGTCCCTAT
CAAGTGGCTCAAAGTCAGTGACTTCGTCAACAAGTACAAATCCAGTTATA
CAGACACGTGTCTCATGGACAAACGTACCTTGTTCGACAAGATGAGTCAG
GAAGGTGTTGTTGAGGCAGAAGACGATGGAGAAGAGTTTGAGGAGATTCT
GAAGTTTTACGACGAAATTGGAGAAGTCAAGGTCATGGATGATGTTGTTG
TCTTGAATCTGAAAGCTTTGGTTCAGCTTGTGATAGAGCTTGTGGAGCTT
GATTGTGATGATCATGAGCTTGGAATCGTTCACGTCAGTTCTTTGCGCAT
AGTGTGGACATTTTTGACAGCGGAGAATTTCCTTTCCACCATCACACTGT
TTGAGAGATATGACATCCTGTGCCCAATCTCACAAGAGCAGTACCTCGTG
CCCTTGCTTCTCAAGACTAGTGACGAGAAAAGAGCCGAGAAAGGCAAGCA
AGAAGAGACAGACCAGGGTTCTGCGGCATTCTGGAACACCACAGAATCGG
ATACGGTTCTCTACTTCAAATTCTACAAGTTCCATCCCGAAGCCATCTTC
CTCCGCCTGCTTGCCCGATGTTTGTCAATGTCGCAGAAAACCCATGACCT
TGGTCGTGGCGCTGACCGAGATGTCTACAGAAATGTGGGCAGATTCTACC
AGGGACATGATTTCTACTACAAAGTGGAGCTCCTGTGTGCATCCGTGGAA
CAGAACATGATCCAGGTCACTGTCAAATGTGCTCCAAACAGAGGTCCTCA
TTCTCTACTGTCCAGACTTCACAAGGACTTGCAGCAGATCCGAGGCAGGG
ACTTTCCTTACCTGAACTACACAGTGGGGCTTCCATGTCCGGCATGCAGT
TTTGACTGCAGTCGGGAAGGAGGGAGAGAAGTTGCCACTCCGCACATCCT
GAGGGTAGCAGGACATGACGAAGATCTCCCACGACCCGGGGAGAAAATAA
CTCTGATGTGCCGAGGTAAAGCGTTTGAAGTGGACCTGGGAGAACACGTG
GGTACCTACCGTCTTGCTTTCACCGGTATACGTATGATTGAATCGAATCA
AAGAATACATGCAGTACATGTGTGTATTAGTTTTTTACCTACACATGGGC
TGCATATTGTGAATTGTGGAGAAGTCCACTTAAAACCTGGAATGGTGTAG
AATAACTTCCAAAACTACCTTTCATTTCAACAGAAACCGACACTGGATGC
TGCCCGGCCGATGAAGACTGGAGAAAGCAGCAGAACGTCTGAACAGAAAG
GTGTGTTGCTATTTTCCACCTCAATTTTCGGTGGTTTGCCACCAGCATTA
CAAAATCAATTGGACTATCTAGAGCATTAAGAGAATGATTGACACATTTG
GGACGTCGCAGTATGTAACAAGAGTCTTAGGACCCAAAATCTCCATGAAA
CTTTGTTTTTTATTTAACCAGTTCCCCCCCATTCTATATCGCTCAATGGT
ATGACCCACACCTGTCGCCAGGAGAAGTGACCCACTTTCGCTATAAATAG
CTATAAGTAACAGATGTTGTTCCACAATATACAATAGACAACACTGCAAA
TATAGATTTTCCTCATTACCAAAATCGACCTTGACCTTTCTCCTCCTAGC
ACATACCCACATACCAACTATCATTACAATCCATCTACACGTTCTACAGT
TATGCTGACTTTAAGCATCCAGCGACACACATGCAAACGATTTTCCACCA
TACTTATGCAAATTAGTCTCATTTGCATAATTTGCACTTAAGTGTGTACA
TCTCTGTCCAACCTACCTGTGTACCAAATAACATGACAATCTGTCGCTCC
TTTCTTCAGTTATTCTCCTTAGAAGATTTTTACAAATACGCCATGGCAGT
TCCAGTGCCACATACCAGGGGGCCCAATATCGATCTTGACCTTCCTCCTC
TTAACACCTACTTACATACCAAATATCATTACAATCCATGTACATGTTCT
ACAGTTATGCTGACTTTAAGCATCCGGTGACACAAACATACACACAAACA
CCAAACGCACGCAAAACAGTATCTCCATGAAAAAGCCTTTTTTCATGGAG
ATAACAAATAAGTTGTTGTTTCTCTACACAGGTAGCATTGGCCTCTTGAA
CCCAAAGACCACCCAACACCTCTCCATCCTCCTGGACCCTCCCGCACCCA
TCTTTGGGAACAACTGGAGGGCGCTGGCTGGAGAACTGGGGCTGTGCTTC
CAGGACATCTGCTACATCGAGACCAAGCACAACCCGACAGAGATGGTTCT
AGAAATGTATCATAAGAACACACCAACTGCTAACAATGACCAAATCCACA
GGGCTTTGTTAGACATAGACAGACCGGATGCCGCTGAAGTGATTCAGCCT
AATAGTGTGGAATCACAAGAAACAGCTCAATGA Coding sequence (CDS) from alignment at Sc0000080:147049..149781+ >transcript:BL95639_evm0 ID=transcript:BL95639_evm0|Name=transcript:BL95639_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=5148bp|location=Sequence derived from alignment at Sc0000080:147049..149781+ (Branchiostoma lanceolatum)
ATGGAACGATTAGAACAGGAGCCAGACTACATCAGGCATATTTGCTACTG
GGTTCAGTCTGTGACAGTCCACGTACAAAACCCCAACCCTCACATCTTCA
TTGTTGGAACGCATACAAACAGTTTGCCGATAGAGAGAACAAAGATTCTG
TCCAGCAAGGTGAACAAGGCATTGCTTAGCAATGAAAAGTTTGCTCAGTC
TATTGTAGGAAAACCAAACAACAACAAAGACGTTCTATTCTGTGTGGAGA
ACTCTCTACCACTTCGTCAAGATCCCCAGGCGCGTCTCCTTCGAAACACC
ATCATGGAAGTCGCCGCTTCGTCGTTCCAATCCAAGAGACACGTCCCTAT
CAAGTGGCTCAAAGTCAGTGACTTCGTCAACAAGTACAAATCCAGTTATA
CAGACACGTGTCTCATGGACAAACGTACCTTGTTCGACAAGATGAGTCAG
GAAGGTGTTGTTGAGGCAGAAGACGATGGAGAAGAGTTTGAGGAGATTCT
GAAGTTTTACGACGAAATTGGAGAAGTCAAGGTCATGGATGATGTTGTTG
TCTTGAATCTGAAAGCTTTGGTTCAGCTTGTGATAGAGCTTGTGGAGCTT
GATTGTGATGATCATGAGCTTGGAATCGTTCACGTCAGTTCTTTGCGCAT
AGTGTGGACATTTTTGACAGCGGAGAATTTCCTTTCCACCATCACACTGT
TTGAGAGATATGACATCCTGTGCCCAATCTCACAAGAGCAGTACCTCGTG
CCCTTGCTTCTCAAGACTAGTGACGAGAAAAGAGCCGAGAAAGGCAAGCA
AGAAGAGACAGACCAGGGTTCTGCGGCATTCTGGAACACCACAGAATCGG
ATACGGTTCTCTACTTCAAATTCTACAAGTTCCATCCCGAAGCCATCTTC
CTCCGCCTGCTTGCCCGATGTTTGTCAATGTCGCAGAAAACCCATGACCT
TGGTCGTGGCGCTGACCGAGATGTCTACAGAAATGTGGGCAGATTCTACC
AGGGACATGATTTCTACTACAAAGTGGAGCTCCTGTGTGCATCCGTGGAA
CAGAACATGATCCAGGTCACTGTCAAATGTGCTCCAAACAGAGGTCCTCA
TTCTCTACTGTCCAGACTTCACAAGGACTTGCAGCAGATCCGAGGCAGGG
ACTTTCCTTACCTGAACTACACAGTGGGGCTTCCATGTCCGGCATGCAGT
TTTGACTGCAGTCGGGAAGGAGGGAGAGAAGTTGCCACTCCGCACATCCT
GAGGGTAGCAGGACATGACGAAGATCTCCCACGACCCGGGGAGAAAATAA
CTCTGATGTGCCGAGGTAAAGCGTTTGAAGTGGACCTGGGAGAACACAAA
CCGACACTGGATGCTGCCCGGCCGATGAAGACTGGAGAAAGCAGCAGAAC
GTCTGAACAGAAAGGTAGCATTGGCCTCTTGAACCCAAAGACCACCCAAC
ACCTCTCCATCCTCCTGGACCCTCCCGCACCCATCTTTGGGAACAACTGG
AGGGCGCTGGCTGGAGAACTGGGGCTGTGCTTCCAGGACATCTGCTACAT
CGAGACCAAGCACAACCCGACAGAGATGGTTCTAGAAATGTATCATAAGA
ACACACCAACTGCTAACAATGACCAAATCCACAGGGCTTTGTTAGACATA
GACAGACCGGATGCCGCTGAAGTGATTCAGCCTAATAGTGTGGAATCACA
AGAAACAGCTCAATGAATGGAACGATTAGAACAGGAGCCAGACTACATCA
GGCATATTTGCTACTGGGTTCAGTCTGTGACAGTCCACGTACAAAACCCC
AACCCTCACATCTTCATTGTTGGAACGCATACAAACAGTTTGCCGATAGA
GAGAACAAAGATTCTGTCCAGCAAGGTGAACAAGGCATTGCTTAGCAATG
AAAAGTTTGCTCAGTCTATTGTAGGAAAACCAAACAACAACAAAGACGTT
CTATTCTGTGTGGAGAACTCTCTACCACTTCGTCAAGATCCCCAGGCGCG
TCTCCTTCGAAACACCATCATGGAAGTCGCCGCTTCGTCGTTCCAATCCA
AGAGACACGTCCCTATCAAGTGGCTCAAAGTCAGTGACTTCGTCAACAAG
TACAAATCCAGTTATACAGACACGTGTCTCATGGACAAACGTACCTTGTT
CGACAAGATGAGTCAGGAAGGTGTTGTTGAGGCAGAAGACGATGGAGAAG
AGTTTGAGGAGATTCTGAAGTTTTACGACGAAATTGGAGAAGTCAAGGTC
ATGGATGATGTTGTTGTCTTGAATCTGAAAGCTTTGGTTCAGCTTGTGAT
AGAGCTTGTGGAGCTTGATTGTGATGATCATGAGCTTGGAATCGTTCACG
TCAGTTCTTTGCGCATAGTGTGGACATTTTTGACAGCGGAGAATTTCCTT
TCCACCATCACACTGTTTGAGAGATATGACATCCTGTGCCCAATCTCACA
AGAGCAGTACCTCGTGCCCTTGCTTCTCAAGACTAGTGACGAGAAAAGAG
CCGAGAAAGGCAAGCAAGAAGAGACAGACCAGGGTTCTGCGGCATTCTGG
AACACCACAGAATCGGATACGGTTCTCTACTTCAAATTCTACAAGTTCCA
TCCCGAAGCCATCTTCCTCCGCCTGCTTGCCCGATGTTTGTCAATGTCGC
AGAAAACCCATGACCTTGGTCGTGGCGCTGACCGAGATGTCTACAGAAAT
GTGGGCAGATTCTACCAGGGACATGATTTCTACTACAAAGTGGAGCTCCT
GTGTGCATCCGTGGAACAGAACATGATCCAGGTCACTGTCAAATGTGCTC
CAAACAGAGGTCCTCATTCTCTACTGTCCAGACTTCACAAGGACTTGCAG
CAGATCCGAGGCAGGGACTTTCCTTACCTGAACTACACAGTGGGGCTTCC
ATGTCCGGCATGCAGTTTTGACTGCAGTCGGGAAGGAGGGAGAGAAGTTG
CCACTCCGCACATCCTGAGGGTAGCAGGACATGACGAAGATCTCCCACGA
CCCGGGGAGAAAATAACTCTGATGTGCCGAGGTAAAGCGTTTGAAGTGGA
CCTGGGAGAACACAAACCGACACTGGATGCTGCCCGGCCGATGAAGACTG
GAGAAAGCAGCAGAACGTCTGAACAGAAAGGTAGCATTGGCCTCTTGAAC
CCAAAGACCACCCAACACCTCTCCATCCTCCTGGACCCTCCCGCACCCAT
CTTTGGGAACAACTGGAGGGCGCTGGCTGGAGAACTGGGGCTGTGCTTCC
AGGACATCTGCTACATCGAGACCAAGCACAACCCGACAGAGATGGTTCTA
GAAATGTATCATAAGAACACACCAACTGCTAACAATGACCAAATCCACAG
GGCTTTGTTAGACATAGACAGACCGGATGCCGCTGAAGTGATTCAGCCTA
ATAGTGTGGAATCACAAGAAACAGCTCAATGAATGGAACGATTAGAACAG
GAGCCAGACTACATCAGGCATATTTGCTACTGGGTTCAGTCTGTGACAGT
CCACGTACAAAACCCCAACCCTCACATCTTCATTGTTGGAACGCATACAA
ACAGTTTGCCGATAGAGAGAACAAAGATTCTGTCCAGCAAGGTGAACAAG
GCATTGCTTAGCAATGAAAAGTTTGCTCAGTCTATTGTAGGAAAACCAAA
CAACAACAAAGACGTTCTATTCTGTGTGGAGAACTCTCTACCACTTCGTC
AAGATCCCCAGGCGCGTCTCCTTCGAAACACCATCATGGAAGTCGCCGCT
TCGTCGTTCCAATCCAAGAGACACGTCCCTATCAAGTGGCTCAAAGTCAG
TGACTTCGTCAACAAGTACAAATCCAGTTATACAGACACGTGTCTCATGG
ACAAACGTACCTTGTTCGACAAGATGAGTCAGGAAGGTGTTGTTGAGGCA
GAAGACGATGGAGAAGAGTTTGAGGAGATTCTGAAGTTTTACGACGAAAT
TGGAGAAGTCAAGGTCATGGATGATGTTGTTGTCTTGAATCTGAAAGCTT
TGGTTCAGCTTGTGATAGAGCTTGTGGAGCTTGATTGTGATGATCATGAG
CTTGGAATCGTTCACGTCAGTTCTTTGCGCATAGTGTGGACATTTTTGAC
AGCGGAGAATTTCCTTTCCACCATCACACTGTTTGAGAGATATGACATCC
TGTGCCCAATCTCACAAGAGCAGTACCTCGTGCCCTTGCTTCTCAAGACT
AGTGACGAGAAAAGAGCCGAGAAAGGCAAGCAAGAAGAGACAGACCAGGG
TTCTGCGGCATTCTGGAACACCACAGAATCGGATACGGTTCTCTACTTCA
AATTCTACAAGTTCCATCCCGAAGCCATCTTCCTCCGCCTGCTTGCCCGA
TGTTTGTCAATGTCGCAGAAAACCCATGACCTTGGTCGTGGCGCTGACCG
AGATGTCTACAGAAATGTGGGCAGATTCTACCAGGGACATGATTTCTACT
ACAAAGTGGAGCTCCTGTGTGCATCCGTGGAACAGAACATGATCCAGGTC
ACTGTCAAATGTGCTCCAAACAGAGGTCCTCATTCTCTACTGTCCAGACT
TCACAAGGACTTGCAGCAGATCCGAGGCAGGGACTTTCCTTACCTGAACT
ACACAGTGGGGCTTCCATGTCCGGCATGCAGTTTTGACTGCAGTCGGGAA
GGAGGGAGAGAAGTTGCCACTCCGCACATCCTGAGGGTAGCAGGACATGA
CGAAGATCTCCCACGACCCGGGGAGAAAATAACTCTGATGTGCCGAGGTA
AAGCGTTTGAAGTGGACCTGGGAGAACACAAACCGACACTGGATGCTGCC
CGGCCGATGAAGACTGGAGAAAGCAGCAGAACGTCTGAACAGAAAGGTAG
CATTGGCCTCTTGAACCCAAAGACCACCCAACACCTCTCCATCCTCCTGG
ACCCTCCCGCACCCATCTTTGGGAACAACTGGAGGGCGCTGGCTGGAGAA
CTGGGGCTGTGCTTCCAGGACATCTGCTACATCGAGACCAAGCACAACCC
GACAGAGATGGTTCTAGAAATGTATCATAAGAACACACCAACTGCTAACA
ATGACCAAATCCACAGGGCTTTGTTAGACATAGACAGACCGGATGCCGCT
GAAGTGATTCAGCCTAATAGTGTGGAATCACAAGAAACAGCTCAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000080 | genome | Sc0000080:147049..149781 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95639_evm0 |
| Biotype | protein_coding |
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