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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95633_evm1 >transcript:BL95633_evm1-protein ID=transcript:BL95633_evm1-protein|Name=transcript:BL95633_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=254bp
MADPFCGPAYPSVNDNTTTVDIRTEECLVDGLNLIPHAGYLPLALLALLL
WRWKRGKETETRKGWVLFPGHYARWTVTLLLLFITLCEVGEGVLSDSYSP
GHHIHLYLPWIVSLLATLLAGVYYYQVEMSNKPRLLLPLFVYYVMSAGFK
AARLAHLYSRDVSSTRLRLSLTWTSVVLYALQIVIEGYTLFKLKYLSANP
VQLKPHSALKDDNMRYVFPYVTLPSRATFWWASWILRVGYKEPLEMSHLG
RIPK Run BLAST on NCBI mRNA from alignment at Sc0000077:1301271..1303101+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95633_evm1 ID=transcript:BL95633_evm1|Name=transcript:BL95633_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1831bp|location=Sequence derived from alignment at Sc0000077:1301271..1303101+ (Branchiostoma lanceolatum)
ATGGCAGACCCGTTCTGTGGCCCCGCCTACCCTTCTGTCAATGACAATAC
TACAACAGTGGACATCAGGACGGAGGAATGCCTCGTGGATGGACTCAACT
TGATACCTCATGCGGGGTACCTGCCACTGGCTCTTCTAGGTCAGTTTGCG
ATTTTTCAAATCATTTTTAAAAGCGCTAATTATGAACGTTAGTCTCGTTC
CCGAGGGAGGCATTACAATTTGGTGTTGTTAACGCTGTTGTTTAGATCCT
TTAAACAAACACTCAAATGCGCCACGAGTCCTATGTTGGGAATTTGATAC
CTGTCTTGCGTGGGACCTTGCCATGGATATGTCACTTAGTACGTAGTTCA
CAGAGCAAGTACATAATCTATGAAGACAAATAAACACCACAACAACAACC
GTGTATGTAAAGTGTCTGAAATGTGGTTTCATTATTTGAACTTCTTTAGC
ACTGCTTTTGTGGAGATGGAAACGGGGGAAAGAGACTGAGACGCGGAAAG
GTTGGGTCTTGTTCCCAGGGCACTACGCACGGTGGACAGTCACTCTCCTT
CTTCTGTTCATCACGCTATGCGAGGTGAGAGACAATACTGTCCGCCCTTT
CGGGCAAATGCAGAATATTTTCCTTATCATTATTTCATATAACTCCATGA
TCTCTTTTTGAATGATTTTTTTGTTGTTGTTGTGTGTCGCTAACTGGATA
GGTTCGAATTCAGTCAATTTGTCTAGCCGGATGCGTCTTCGTGATCCGCA
TAACATATCACCATAGCCATGACTTTATAACATGCCATATCCACAGGTAG
GAGAGGGGGTTTTATCGGACAGTTACAGTCCTGGACATCACATCCACCTG
TACCTGCCATGGATAGTCTCACTGCTGGCCACCCTGCTGGCCGGTGTCTA
CTACTACCAGGTAAACCCCTCGATTTACATATATCATTACGTCTAGTAAT
CACTGTATGTAGGGTGGAATCATAACATTCACCATGATAGTGTTTCCTAA
TCTACATTTACTATCCTTAGATCTATTTAATTATGATACTCAAAGTAATA
AAGTGGCTGTTTGTCTATAGGAATCAAGTAGATGCTTTATCGCAATGGTG
AAATAGCTTCGTACTTTTCTGTTCTCACACAGGTGGAAATGTCCAACAAA
CCCCGCCTGTTGCTGCCGCTGTTCGTGTACTACGTCATGTCTGCCGGCTT
CAAAGCTGCCCGGCTGGCTCATCTGTACAGCCGTGACGTCAGCTCCACCC
GACTCCGGCTGAGTCTGACATGGACGTCTGTCGTCCTGTACGCGCTGCAG
ATCGTCATTGAAGGATACACCCTATTTAAATTGGTAAATATTTTTATGGT
TTGATACGGTTTCCAAAATCATACCCAGTTGCTTGAGTAACTGCTATTTG
GCGTATATTATTACCTGGATCTCTGACCTTCATCGAAGTATTTCTACGTT
TGTTGTCTCCTCTACATACAGGTTCTACATACGATTAGCCCTTCATGCTA
CGATAATGATACTGATAATGACCAATATCACCATCACAATGTTCTTGTTT
GTAACGACTCTGCTATGAATCTATTATTGAGTATGCCCTTTGGCTCGCTA
GCTAGGTAAGTATGTAATGACCCCATTTTACGTATTTTATTTCTGCAGAA
GTACCTGTCGGCCAACCCAGTCCAGCTGAAGCCGCACAGTGCCTTGAAGG
ACGACAACATGCGCTACGTGTTTCCTTACGTCACGCTCCCGTCACGTGCC
ACGTTCTGGTGGGCCAGCTGGATCCTACGGGTGGGCTACAAGGAACCTCT
GGAGATGTCGCACTTGGGCAGGATTCCCAAG Coding sequence (CDS) from alignment at Sc0000077:1301271..1303101+ >transcript:BL95633_evm1 ID=transcript:BL95633_evm1|Name=transcript:BL95633_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3810bp|location=Sequence derived from alignment at Sc0000077:1301271..1303101+ (Branchiostoma lanceolatum)
ATGGCAGACCCGTTCTGTGGCCCCGCCTACCCTTCTGTCAATGACAATAC
TACAACAGTGGACATCAGGACGGAGGAATGCCTCGTGGATGGACTCAACT
TGATACCTCATGCGGGGTACCTGCCACTGGCTCTTCTAGCACTGCTTTTG
TGGAGATGGAAACGGGGGAAAGAGACTGAGACGCGGAAAGGTTGGGTCTT
GTTCCCAGGGCACTACGCACGGTGGACAGTCACTCTCCTTCTTCTGTTCA
TCACGCTATGCGAGGTAGGAGAGGGGGTTTTATCGGACAGTTACAGTCCT
GGACATCACATCCACCTGTACCTGCCATGGATAGTCTCACTGCTGGCCAC
CCTGCTGGCCGGTGTCTACTACTACCAGGTGGAAATGTCCAACAAACCCC
GCCTGTTGCTGCCGCTGTTCGTGTACTACGTCATGTCTGCCGGCTTCAAA
GCTGCCCGGCTGGCTCATCTGTACAGCCGTGACGTCAGCTCCACCCGACT
CCGGCTGAGTCTGACATGGACGTCTGTCGTCCTGTACGCGCTGCAGATCG
TCATTGAAGGATACACCCTATTTAAATTGAAGTACCTGTCGGCCAACCCA
GTCCAGCTGAAGCCGCACAGTGCCTTGAAGGACGACAACATGCGCTACGT
GTTTCCTTACGTCACGCTCCCGTCACGTGCCACGTTCTGGTGGGCCAGCT
GGATCCTACGGGTGGGCTACAAGGAACCTCTGGAGATGTCGCACTTGGGC
AGGATTCCCAAGATGGCAGACCCGTTCTGTGGCCCCGCCTACCCTTCTGT
CAATGACAATACTACAACAGTGGACATCAGGACGGAGGAATGCCTCGTGG
ATGGACTCAACTTGATACCTCATGCGGGGTACCTGCCACTGGCTCTTCTA
GCACTGCTTTTGTGGAGATGGAAACGGGGGAAAGAGACTGAGACGCGGAA
AGGTTGGGTCTTGTTCCCAGGGCACTACGCACGGTGGACAGTCACTCTCC
TTCTTCTGTTCATCACGCTATGCGAGGTAGGAGAGGGGGTTTTATCGGAC
AGTTACAGTCCTGGACATCACATCCACCTGTACCTGCCATGGATAGTCTC
ACTGCTGGCCACCCTGCTGGCCGGTGTCTACTACTACCAGGTGGAAATGT
CCAACAAACCCCGCCTGTTGCTGCCGCTGTTCGTGTACTACGTCATGTCT
GCCGGCTTCAAAGCTGCCCGGCTGGCTCATCTGTACAGCCGTGACGTCAG
CTCCACCCGACTCCGGCTGAGTCTGACATGGACGTCTGTCGTCCTGTACG
CGCTGCAGATCGTCATTGAAGGATACACCCTATTTAAATTGAAGTACCTG
TCGGCCAACCCAGTCCAGCTGAAGCCGCACAGTGCCTTGAAGGACGACAA
CATGCGCTACGTGTTTCCTTACGTCACGCTCCCGTCACGTGCCACGTTCT
GGTGGGCCAGCTGGATCCTACGGGTGGGCTACAAGGAACCTCTGGAGATG
TCGCACTTGGGCAGGATTCCCAAGATGGCAGACCCGTTCTGTGGCCCCGC
CTACCCTTCTGTCAATGACAATACTACAACAGTGGACATCAGGACGGAGG
AATGCCTCGTGGATGGACTCAACTTGATACCTCATGCGGGGTACCTGCCA
CTGGCTCTTCTAGCACTGCTTTTGTGGAGATGGAAACGGGGGAAAGAGAC
TGAGACGCGGAAAGGTTGGGTCTTGTTCCCAGGGCACTACGCACGGTGGA
CAGTCACTCTCCTTCTTCTGTTCATCACGCTATGCGAGGTAGGAGAGGGG
GTTTTATCGGACAGTTACAGTCCTGGACATCACATCCACCTGTACCTGCC
ATGGATAGTCTCACTGCTGGCCACCCTGCTGGCCGGTGTCTACTACTACC
AGGTGGAAATGTCCAACAAACCCCGCCTGTTGCTGCCGCTGTTCGTGTAC
TACGTCATGTCTGCCGGCTTCAAAGCTGCCCGGCTGGCTCATCTGTACAG
CCGTGACGTCAGCTCCACCCGACTCCGGCTGAGTCTGACATGGACGTCTG
TCGTCCTGTACGCGCTGCAGATCGTCATTGAAGGATACACCCTATTTAAA
TTGAAGTACCTGTCGGCCAACCCAGTCCAGCTGAAGCCGCACAGTGCCTT
GAAGGACGACAACATGCGCTACGTGTTTCCTTACGTCACGCTCCCGTCAC
GTGCCACGTTCTGGTGGGCCAGCTGGATCCTACGGGTGGGCTACAAGGAA
CCTCTGGAGATGTCGCACTTGGGCAGGATTCCCAAGATGGCAGACCCGTT
CTGTGGCCCCGCCTACCCTTCTGTCAATGACAATACTACAACAGTGGACA
TCAGGACGGAGGAATGCCTCGTGGATGGACTCAACTTGATACCTCATGCG
GGGTACCTGCCACTGGCTCTTCTAGCACTGCTTTTGTGGAGATGGAAACG
GGGGAAAGAGACTGAGACGCGGAAAGGTTGGGTCTTGTTCCCAGGGCACT
ACGCACGGTGGACAGTCACTCTCCTTCTTCTGTTCATCACGCTATGCGAG
GTAGGAGAGGGGGTTTTATCGGACAGTTACAGTCCTGGACATCACATCCA
CCTGTACCTGCCATGGATAGTCTCACTGCTGGCCACCCTGCTGGCCGGTG
TCTACTACTACCAGGTGGAAATGTCCAACAAACCCCGCCTGTTGCTGCCG
CTGTTCGTGTACTACGTCATGTCTGCCGGCTTCAAAGCTGCCCGGCTGGC
TCATCTGTACAGCCGTGACGTCAGCTCCACCCGACTCCGGCTGAGTCTGA
CATGGACGTCTGTCGTCCTGTACGCGCTGCAGATCGTCATTGAAGGATAC
ACCCTATTTAAATTGAAGTACCTGTCGGCCAACCCAGTCCAGCTGAAGCC
GCACAGTGCCTTGAAGGACGACAACATGCGCTACGTGTTTCCTTACGTCA
CGCTCCCGTCACGTGCCACGTTCTGGTGGGCCAGCTGGATCCTACGGGTG
GGCTACAAGGAACCTCTGGAGATGTCGCACTTGGGCAGGATTCCCAAGAT
GGCAGACCCGTTCTGTGGCCCCGCCTACCCTTCTGTCAATGACAATACTA
CAACAGTGGACATCAGGACGGAGGAATGCCTCGTGGATGGACTCAACTTG
ATACCTCATGCGGGGTACCTGCCACTGGCTCTTCTAGCACTGCTTTTGTG
GAGATGGAAACGGGGGAAAGAGACTGAGACGCGGAAAGGTTGGGTCTTGT
TCCCAGGGCACTACGCACGGTGGACAGTCACTCTCCTTCTTCTGTTCATC
ACGCTATGCGAGGTAGGAGAGGGGGTTTTATCGGACAGTTACAGTCCTGG
ACATCACATCCACCTGTACCTGCCATGGATAGTCTCACTGCTGGCCACCC
TGCTGGCCGGTGTCTACTACTACCAGGTGGAAATGTCCAACAAACCCCGC
CTGTTGCTGCCGCTGTTCGTGTACTACGTCATGTCTGCCGGCTTCAAAGC
TGCCCGGCTGGCTCATCTGTACAGCCGTGACGTCAGCTCCACCCGACTCC
GGCTGAGTCTGACATGGACGTCTGTCGTCCTGTACGCGCTGCAGATCGTC
ATTGAAGGATACACCCTATTTAAATTGAAGTACCTGTCGGCCAACCCAGT
CCAGCTGAAGCCGCACAGTGCCTTGAAGGACGACAACATGCGCTACGTGT
TTCCTTACGTCACGCTCCCGTCACGTGCCACGTTCTGGTGGGCCAGCTGG
ATCCTACGGGTGGGCTACAAGGAACCTCTGGAGATGTCGCACTTGGGCAG
GATTCCCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000077 | genome | Sc0000077:1301271..1303101 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95633_evm1 |
| Biotype | protein_coding |
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