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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95632_evm1 >transcript:BL95632_evm1-protein ID=transcript:BL95632_evm1-protein|Name=transcript:BL95632_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=222bp
MAHGHSPKYYCVVDFEATCIKPRRADFRTEIIEFGAVIVDGSNFQMLEEF
HEYCRPVENPELSPFCKELTKIQQDTVDAASPFPVVFDRFQKWLSNRGLT
DSNFALVTDGIFDCNQIMRSQCEVSRMSFPSFARRFSNIKLHYMQLMGIR
LRRGQATPRIPDMLSALGISQQGQLHSAISDARNICRIMEALSRKLRASG
RPAAFPNNETLKANWVVNHPSD Run BLAST on NCBI mRNA from alignment at Sc0000077:1265774..1269048+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95632_evm1 ID=transcript:BL95632_evm1|Name=transcript:BL95632_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3275bp|location=Sequence derived from alignment at Sc0000077:1265774..1269048+ (Branchiostoma lanceolatum)
ATGGCGCACGGACACTCTCCCAAGTACTACTGTGTGGTGGATTTTGAGGC
GACATGTATCAAGCCGCGTCGGGCGGACTTCCGGACCGAAATCATCGAGT
TTGGCGCCGTCATCGTGGATGGAAGTAACTTCCAAATGGTATGTATATAT
ATTTATATCCGCGAATAACTCCATCAGGTTGGTGAGTCATTTACAAGTTA
TTATAGTCCTTTTAACACAGCCACAGTCAATTCCCCGTCAATGTGGCCAG
GAGTAGCATGCTAACAGGAGGGCAGCTGAAGCCAATCGGAACATTTGCGA
AGGAATTGTCTGTGACGGTGGTTGTAGTTGTGTAAACAAAAAAGCTTTAC
TTGTATGAGTATGTATATACTATTCATTGCTGTAGAGGGGCCGAGTGCTT
CAAAATGCATTTGAAATCTACATTTTGTATCTCTGTGAAACACTTGACAA
AGGCATTGTACTGTAGCTCTTGTGCTGTCATGAACACGTCGACAGGTGCG
ACGAAAACTGAACATGTATGATTGATTCAGAAAACAAATAACTGGGTGTA
GAAACGAGACGTGGCGCAAATGTGAAAGAATAGCCTGATATTATATTTGG
TAACGAACGGATGGAAAATAAAAGAGTGGACGGAAGTCGATAAGATCAAA
GTTCCTGTTTAGGCAAAAATTTGTTGCCAAGACATATCGTATTTCCAATG
CCACCATATTTTGCCCATCTGAAGTTCGACTTTGGCAGGGACGCTGGTTG
AGTTTCGGGTATTGTTTACTTAAACACCCGCATCGATCATCTTACCATTG
TGTCCATATGGGTTCTATTTATTGTTAATGACCCGTTATCGAAACTATGT
GACCTATCGAAAGTGGGTAACGTCATCGAAACTAATTTATATGTCATCAT
AATCCACGGATTGTGTGATCAAAATAAGTTAGTCTTTTTCACTTTAAAGG
GCAGAATAAAACATTCATTAACGATACGTCTGTGAAAGTTGGTACATTGA
GTATGATTATAGCAACCTTCTAAAAGCAATAACAATTTTGCACAATGAAG
TCTTTTTTATTTGAACAAAACATTACAAACACACGGATAGCCTCCGCGAA
ACAAAGGCATTTTCACATGTGGAGGAATTGAACCTCTCACTCTTTTTTGT
TAACAAATGACAGGCCGCTATGAATAGGACCCTTTCAGGAATATACGATT
GTGACGGTACTTTTCGTTGTCTAAAGGCCTATAGCCTCCACTAGATTCCT
TTGGCTAGAATATTCTGGTTGATTTTCTGCCAAGTCATTCACCCAAAGTG
GCCAATTTCAGCACCCAAATGAGTCTGTTGGAGATTAGTTTTCGAGGCGA
GTCCATAAGAAGTGACGAAAAAATATTTCCCAAACAAAGCAATCAAAATC
AAGGAAGAAGTGTTGCGACAATTATTCACCCTTGATAGATATTTGTTGTT
GTTGTCATTAGTCTAATTTCCTATTGCTTATCCCGTCCTTCAGCTTGAGG
AATTCCACGAGTACTGCAGACCAGTGGAGAATCCTGAACTCAGTCCGTTC
TGTAAGGAACTCACCAAGATACAACAGGTACGTATACACATGGCAATCAG
TACAGAGCCTGGAAAATGTATGCATCTGATATACCTCGGGATCTGCCTTA
GCATCTGTTGCTGATCCCAAATTTTCAATAAAACAATTCTTTCGAGTAGC
TTCTTTGCTGAAAAAAAATCAGGTCAGACCAGCACCTTGCCATGTAAAGG
TTATTCCTTATCTCTAATTAAGTTGTAGAAGTTGCTATGTGATATTTATG
ACGATGTATTAAACATTATCACTTCATCTTACTCACATTCACAACAGGAC
ACGGTGGATGCTGCCAGTCCCTTCCCGGTGGTGTTTGACCGCTTCCAGAA
ATGGCTGTCTAACAGAGGCCTTACAGACTCCAACTTTGCACTGGTTACAG
ATGGGTAACGATCCTTTACTTTGCACTCAGATGTAGTCTCTGAATTGAAG
GAATATTATCTGGCAATATTGAAGAAACTTTCATTTACATGTCTATATTC
ATGTTTTGGCCATTTTTGAGGTAGAGATACTAGCACGATTTGACAGCTCT
CACAATGCCAAAATAGGTAAATATATTGCTTTGTTATTAGAAAAGGCACT
AAAACCCTCGATTATTCCCACCTAATTGTATCAAGATACTAGAAATCCGC
GTATGTTAGCCTGTATTGTTTAGTACATAGAATTGTAAGGTTTTTTTGCA
CTTCTATTTTGTAGTTTGTTGCTGACCGTGCGAAAGTCACTGTACTTTTT
GTGGCGTCAATGATAAAGCTTTTACTGGTGGCAAGTGCAAGTAAGAAATC
TGTTTCTTCGGAACACACCAGTATACTAGTATTGTCAGTACAATAACAGG
ACTTCACTCTCTCAGCATCTTCGACTGTAACCAGATCATGCGGTCCCAGT
GCGAGGTGTCCCGTATGTCCTTCCCAAGCTTTGCCCGGAGATTCTCCAAC
ATCAAGCTTCACTACATGCAGGTACGTTTAGCTATGCCAACCAAAAGAAA
GGTGCATGAATCCAGTGAGAATCATGAATAATCAAGTCAAGTTATGCATC
AGAAACTTCTCGTTGCATTTCTGTATGCTTGTCATGATCATATTAATCAT
AAACTACTTTAACGGTGTATCACAATCCCAGAAGGATAACTAACGTACGT
ATCACAGAATTCCAACCTTTACTGCTTCATTACACGTTTTCACACTTCCG
TCCCAGCTGATGGGGATCCGTCTGCGACGCGGCCAGGCGACCCCCCGGAT
CCCGGACATGCTGTCGGCTCTGGGCATCAGTCAGCAGGGACAACTCCACA
GCGCCATCAGCGACGCCCGTAACATCTGCCGCATCATGGAGGTATGTCAT
CTCCAAGCTGATGTTGGGAGGCTGATCGTGACGTTTTCTTAGTCTCTACC
AGACTAACCGCGCCGGCTATAGGGAGAACATTTGGCAGAGGACTGTGTGT
GTGTGAGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTNNNACGAAAATGGTTACCGGCCAGCCTGGCCA
GTTATGAGCAGCACTGGTACATACTAGCATCTTTTCTTGCAAATGAAATG
TTTTTTACGTCATTGCCGTTTTACAGGCCCTTTCGCGCAAACTCCGCGCC
AGTGGGAGACCCGCCGCGTTCCCCAACAACGAGACGCTCAAGGCGAACTG
GGTCGTGAACCATCCCTCCGACTAG Coding sequence (CDS) from alignment at Sc0000077:1265774..1269048+ >transcript:BL95632_evm1 ID=transcript:BL95632_evm1|Name=transcript:BL95632_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4014bp|location=Sequence derived from alignment at Sc0000077:1265774..1269048+ (Branchiostoma lanceolatum)
ATGGCGCACGGACACTCTCCCAAGTACTACTGTGTGGTGGATTTTGAGGC
GACATGTATCAAGCCGCGTCGGGCGGACTTCCGGACCGAAATCATCGAGT
TTGGCGCCGTCATCGTGGATGGAAGTAACTTCCAAATGCTTGAGGAATTC
CACGAGTACTGCAGACCAGTGGAGAATCCTGAACTCAGTCCGTTCTGTAA
GGAACTCACCAAGATACAACAGGACACGGTGGATGCTGCCAGTCCCTTCC
CGGTGGTGTTTGACCGCTTCCAGAAATGGCTGTCTAACAGAGGCCTTACA
GACTCCAACTTTGCACTGGTTACAGATGGCATCTTCGACTGTAACCAGAT
CATGCGGTCCCAGTGCGAGGTGTCCCGTATGTCCTTCCCAAGCTTTGCCC
GGAGATTCTCCAACATCAAGCTTCACTACATGCAGCTGATGGGGATCCGT
CTGCGACGCGGCCAGGCGACCCCCCGGATCCCGGACATGCTGTCGGCTCT
GGGCATCAGTCAGCAGGGACAACTCCACAGCGCCATCAGCGACGCCCGTA
ACATCTGCCGCATCATGGAGGCCCTTTCGCGCAAACTCCGCGCCAGTGGG
AGACCCGCCGCGTTCCCCAACAACGAGACGCTCAAGGCGAACTGGGTCGT
GAACCATCCCTCCGACTAGATGGCGCACGGACACTCTCCCAAGTACTACT
GTGTGGTGGATTTTGAGGCGACATGTATCAAGCCGCGTCGGGCGGACTTC
CGGACCGAAATCATCGAGTTTGGCGCCGTCATCGTGGATGGAAGTAACTT
CCAAATGCTTGAGGAATTCCACGAGTACTGCAGACCAGTGGAGAATCCTG
AACTCAGTCCGTTCTGTAAGGAACTCACCAAGATACAACAGGACACGGTG
GATGCTGCCAGTCCCTTCCCGGTGGTGTTTGACCGCTTCCAGAAATGGCT
GTCTAACAGAGGCCTTACAGACTCCAACTTTGCACTGGTTACAGATGGCA
TCTTCGACTGTAACCAGATCATGCGGTCCCAGTGCGAGGTGTCCCGTATG
TCCTTCCCAAGCTTTGCCCGGAGATTCTCCAACATCAAGCTTCACTACAT
GCAGCTGATGGGGATCCGTCTGCGACGCGGCCAGGCGACCCCCCGGATCC
CGGACATGCTGTCGGCTCTGGGCATCAGTCAGCAGGGACAACTCCACAGC
GCCATCAGCGACGCCCGTAACATCTGCCGCATCATGGAGGCCCTTTCGCG
CAAACTCCGCGCCAGTGGGAGACCCGCCGCGTTCCCCAACAACGAGACGC
TCAAGGCGAACTGGGTCGTGAACCATCCCTCCGACTAGATGGCGCACGGA
CACTCTCCCAAGTACTACTGTGTGGTGGATTTTGAGGCGACATGTATCAA
GCCGCGTCGGGCGGACTTCCGGACCGAAATCATCGAGTTTGGCGCCGTCA
TCGTGGATGGAAGTAACTTCCAAATGCTTGAGGAATTCCACGAGTACTGC
AGACCAGTGGAGAATCCTGAACTCAGTCCGTTCTGTAAGGAACTCACCAA
GATACAACAGGACACGGTGGATGCTGCCAGTCCCTTCCCGGTGGTGTTTG
ACCGCTTCCAGAAATGGCTGTCTAACAGAGGCCTTACAGACTCCAACTTT
GCACTGGTTACAGATGGCATCTTCGACTGTAACCAGATCATGCGGTCCCA
GTGCGAGGTGTCCCGTATGTCCTTCCCAAGCTTTGCCCGGAGATTCTCCA
ACATCAAGCTTCACTACATGCAGCTGATGGGGATCCGTCTGCGACGCGGC
CAGGCGACCCCCCGGATCCCGGACATGCTGTCGGCTCTGGGCATCAGTCA
GCAGGGACAACTCCACAGCGCCATCAGCGACGCCCGTAACATCTGCCGCA
TCATGGAGGCCCTTTCGCGCAAACTCCGCGCCAGTGGGAGACCCGCCGCG
TTCCCCAACAACGAGACGCTCAAGGCGAACTGGGTCGTGAACCATCCCTC
CGACTAGATGGCGCACGGACACTCTCCCAAGTACTACTGTGTGGTGGATT
TTGAGGCGACATGTATCAAGCCGCGTCGGGCGGACTTCCGGACCGAAATC
ATCGAGTTTGGCGCCGTCATCGTGGATGGAAGTAACTTCCAAATGCTTGA
GGAATTCCACGAGTACTGCAGACCAGTGGAGAATCCTGAACTCAGTCCGT
TCTGTAAGGAACTCACCAAGATACAACAGGACACGGTGGATGCTGCCAGT
CCCTTCCCGGTGGTGTTTGACCGCTTCCAGAAATGGCTGTCTAACAGAGG
CCTTACAGACTCCAACTTTGCACTGGTTACAGATGGCATCTTCGACTGTA
ACCAGATCATGCGGTCCCAGTGCGAGGTGTCCCGTATGTCCTTCCCAAGC
TTTGCCCGGAGATTCTCCAACATCAAGCTTCACTACATGCAGCTGATGGG
GATCCGTCTGCGACGCGGCCAGGCGACCCCCCGGATCCCGGACATGCTGT
CGGCTCTGGGCATCAGTCAGCAGGGACAACTCCACAGCGCCATCAGCGAC
GCCCGTAACATCTGCCGCATCATGGAGGCCCTTTCGCGCAAACTCCGCGC
CAGTGGGAGACCCGCCGCGTTCCCCAACAACGAGACGCTCAAGGCGAACT
GGGTCGTGAACCATCCCTCCGACTAGATGGCGCACGGACACTCTCCCAAG
TACTACTGTGTGGTGGATTTTGAGGCGACATGTATCAAGCCGCGTCGGGC
GGACTTCCGGACCGAAATCATCGAGTTTGGCGCCGTCATCGTGGATGGAA
GTAACTTCCAAATGCTTGAGGAATTCCACGAGTACTGCAGACCAGTGGAG
AATCCTGAACTCAGTCCGTTCTGTAAGGAACTCACCAAGATACAACAGGA
CACGGTGGATGCTGCCAGTCCCTTCCCGGTGGTGTTTGACCGCTTCCAGA
AATGGCTGTCTAACAGAGGCCTTACAGACTCCAACTTTGCACTGGTTACA
GATGGCATCTTCGACTGTAACCAGATCATGCGGTCCCAGTGCGAGGTGTC
CCGTATGTCCTTCCCAAGCTTTGCCCGGAGATTCTCCAACATCAAGCTTC
ACTACATGCAGCTGATGGGGATCCGTCTGCGACGCGGCCAGGCGACCCCC
CGGATCCCGGACATGCTGTCGGCTCTGGGCATCAGTCAGCAGGGACAACT
CCACAGCGCCATCAGCGACGCCCGTAACATCTGCCGCATCATGGAGGCCC
TTTCGCGCAAACTCCGCGCCAGTGGGAGACCCGCCGCGTTCCCCAACAAC
GAGACGCTCAAGGCGAACTGGGTCGTGAACCATCCCTCCGACTAGATGGC
GCACGGACACTCTCCCAAGTACTACTGTGTGGTGGATTTTGAGGCGACAT
GTATCAAGCCGCGTCGGGCGGACTTCCGGACCGAAATCATCGAGTTTGGC
GCCGTCATCGTGGATGGAAGTAACTTCCAAATGCTTGAGGAATTCCACGA
GTACTGCAGACCAGTGGAGAATCCTGAACTCAGTCCGTTCTGTAAGGAAC
TCACCAAGATACAACAGGACACGGTGGATGCTGCCAGTCCCTTCCCGGTG
GTGTTTGACCGCTTCCAGAAATGGCTGTCTAACAGAGGCCTTACAGACTC
CAACTTTGCACTGGTTACAGATGGCATCTTCGACTGTAACCAGATCATGC
GGTCCCAGTGCGAGGTGTCCCGTATGTCCTTCCCAAGCTTTGCCCGGAGA
TTCTCCAACATCAAGCTTCACTACATGCAGCTGATGGGGATCCGTCTGCG
ACGCGGCCAGGCGACCCCCCGGATCCCGGACATGCTGTCGGCTCTGGGCA
TCAGTCAGCAGGGACAACTCCACAGCGCCATCAGCGACGCCCGTAACATC
TGCCGCATCATGGAGGCCCTTTCGCGCAAACTCCGCGCCAGTGGGAGACC
CGCCGCGTTCCCCAACAACGAGACGCTCAAGGCGAACTGGGTCGTGAACC
ATCCCTCCGACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000077 | genome | Sc0000077:1265774..1269048 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95632_evm1 |
| Biotype | protein_coding |
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