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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95571_evm1 >transcript:BL95571_evm1-protein ID=transcript:BL95571_evm1-protein|Name=transcript:BL95571_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=207bp
MFALSRDLPAVKSKLPQKFVFYYYLSDPLTVWFDITIGGEDAGRIEIGLF
GKTVPKTVKNFIQLAQKTKPDGYKGSVFHRVIGNFMIQGGDFTRGDGTGG
KSIYGDRFEDENFKLHHYGQGWLSMANAGKNTNGSQFFITVAKTEWLDGK
HVVFGKVLKGMSVVKKIEKTKTDGRDRPEKEVKIKDAGHEKFDTPFAVEK
EKVDDNN Run BLAST on NCBI mRNA from alignment at Sc0000061:580581..586472- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95571_evm1 ID=transcript:BL95571_evm1|Name=transcript:BL95571_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=5892bp|location=Sequence derived from alignment at Sc0000061:580581..586472- (Branchiostoma lanceolatum)
ATGTTCGCGCTTTCGCGTGATCTCCCCGCAGTGAAGTCCAAACTACCGCA
AAAATTTGTTTTCTATTATTACCTGTCAGACCCCCTTACTGTATAGTGCC
AGAATCCTGTCCCATCCTGCCACTTAGCCTGGTTTCAGCCAAGCCCCGTG
TCCGCCCGCCGCCTGTAACGGCTATCCACCCGTAGGGTGGGTAGGGGAGA
GAAACCCCCGGACAGCTGGAGTTTGCGTTATACAGACTACCTGCCACTAA
CCCCCTAAATCCTAGATNGCAAAAATTTGTTTTCTATTATTACCTGTCAG
ACCCCCTTACTGTATAGTGCCAGAATCCTGTCCCATCCTGCCACCAACCC
CCTAAATCCTAGATCCTATCCCAACCCAACTGCCAGACCCCCTTGCCAAA
ATCCTGTCCCGTCCTGTCACCAACCCCCTATATCCTAGATCCTGTCCCAG
CCCAAATGTCAGACCCCCTAAATCCGAAGATCCTGTCCCGCCATGTTCAC
CAACCCCCCAAATCCTAGAATCCTGTCCCAACCCAACTGCCAGACCCCCT
TATAGTGCCAAAATCCTGTCCCACCCTGTCACCAACCCCCTATATCCTAG
ATCCTGTCCCAGCCCAACTGTCAGACCCCCTAAATCCGAAAATCCTGTCC
CGCTGTCATCAACCCCCTATATCCCAAATCCTGTCCCAGGTCGTCAACCC
CCTCTCCTCATTTATTTTTTGGAACGGCCCATTATGCATGGCCAGAATCT
TCGTGGCCGGTGGTGCCAAGAAAGTTTAGTCCGGTGAGTTTGCCGGTCTA
TAGCAGCGTAAGAATCGTTAGTTTTTCTTGTATACAACGTTATGTTATGA
TTTTGTCTAGGTTTGGTTTGACATCACCATCGGAGGCGAGGATGCCGGGC
GGATTGAGATCGGACTGTTCGGCAAGACCGTGCCAAAAACAGTCAAGAAC
TTCATCCAACTGGCCCAGAAAACAGTGGGTACAACACATAAATTTGCAGA
TAAAATGTAGTGTCCATACAATGTTCTGGAAAGGGAGCCCTTATTAGCCA
TAGACGACTGATAATTAAGCCCAACAGAAAGAAAAGAGAACATCATGAAT
ATACTGAGGCACCCCACTGATCTAGAGTCTTGATGGGGACGGGGACCCTT
TCATGTAGCCTAGAATACAATCTTGTTAGCAACACTAATTTCCAGGTTAC
ATATGTGCCTGAAGTGTGTGTAACAAGACTAAAGGATAGTGGGAACTACT
CTCCAAGAAGAAGTTCGGCTCCAGCTAGTGTTTGACATGTTTGTATTCAT
TTTTGACAGGCTTTCAGTTTTGTCCTGTTTTCTTTATGCTGGTCACGGCC
CAGCCAAATATTTGTGATCACAGCATTAAAAAAAACAGGACAAAATAGAA
AGCTTGACAAAAAAAGCCTAAAAAAATCATGTTTGAAACCAGCCAGAGCC
GAACCTGTGTTGTCCTTGTTGGAGAGAAAGTGCAGCCCTGAGTAAGTGGA
AACCCCTGACCTTTACTCTACCATTGGTGCAGGTCAATGAGCTTAATTCA
TTATTTCCATGGGGGTCACAAAACCTCACTTCATTCTTATGTAAGTGTGT
CAGAAATCCCCAGAAGTATAATTTTGTTTTTGTGGCCACTTTTCTGGTGT
ATCTCACTATCTGGGATCAAACTGTCTCTCATGTCTGGAAATCTGCAACA
GAGCTGAAGGCTGATAGTAATCAACACCAAGAACATTGTTCACACCAATA
TGTTTACTCAGAATGCAAAACACAATTCTTAGATCAATCAGCACCTCAAA
GGAAAGCTATGTAGGTGAGAGGTGACATAGAAGTGTTAGTGACATAGAAG
TGTTATACCCAATACCTATTGTCTTTTATGCTGGGCAAATGTCTCCAGTT
TGAATCTGGTACTTTCAAATTCTAATAAAAAGGCCGCATGTTGGGGAGTT
GAGAGATTAGTCAGTCTGAGAAGAGAGCAGTGTCCTGTGTGTGTTCCTTA
GTCTTGTACACAGTTCCTCGTGCAGCATCCAAAAGAACCGGGTCACTGAA
TGACACCCTGTAGGTTTCTAGCGGGGACCAACTGATGAATGATTTATCAG
GCCGCCAGCCCATCAAGACTGGAATGCATAAAGTTTTATTTGATCATGCG
GTACAGCCCTTCGTGACACTATAGAGAGAGCATTTTCTGCCGTGTACATG
CAGGCTGTGAGTGTACACTGAAGAACTATCCTACTCCTAGGCTTCATTTA
TACACAGAAATAACAAAGAGACTTGATGTGACACACTTTCATCACAGCAT
GTACTGTAGCATATCATATTTGTATTTGAGTTTGTCTGGCCAGTGGCCAC
AATCAGTACATGCATAGATTTCAACCTACAACAAAGGTAAGTTTATAGGA
ACATAAAACTGTACAACATGTGTACAGAATGTACCTTCTACATTACAAAT
CACAGGAAAACAATATACGATGTATAATGATGGTACAAATGCTGAATTAT
CGTCTTTCACTGCCCTCTTATAAAGGACGTCTTGCAGCCGGCTCATACAC
TAAGTCTGGTGACAAAATCACAGTGCGCCATAAAACCCTCATTCAGAACC
AGTTTGGACTTGATCTCTCTCCATTTTTGTACCAGGCCCGTCTTGGATCG
CTTTTTCTTGGTGGGAAATGTCTGGTCCACTTCACAAATCTCAGCGGCGT
CTAGTCTCCAACCAGACCCAATGGATTACAAAGACCGTATCCAACTGGAA
GAAGAAGCTTGTCATGCAATCCTTGGGTTGCAAAACGTACTTCCTCTGCC
AGTTTGATACGGTCTTTATGCAACCTTTAGATCTGCTTGGAGATTAAGCG
TCGTCAGGATCTCTACCATCTGTAGTGATCGTTCCACTAGCGCGAGTTAG
AGCTGTGTACCGGTACACTGTACCGATACAGTACCGGGTACAATCAATTA
GGTACAGGTCCAAAATACCTGACCCTGCTGTATCAGTACTGGACCTGACT
CAGGGGATGGCCACTTTGACAGATAAAATTACTATGAAATTACCGTGGCA
GTGCTCTAAAGCCACTCTAAAGCACAGAAAACACATTTGCAAGGCTGGAG
TCAAATTTTCATCTGTGTTTTTATAAAAATAATACCTAGCACAATCAAAT
ATTATGCTTTTGTCCTTATTTAAAATCTATCATTTTCCGAACAAGTAGTT
TAGGTACAGGTTCAGGTCCGGACCTGTACCTAAACCTGTGTACCTGTACC
TAAAATTTGTTTAGGTACACAGCTCTAGCGCGAGTGCAGCGCCATTGAAG
GTGTAAATTGTCATCTCCCCTGTTTCTTCCCCTTTGGGTCATCAGCGTTA
ACCTTTCAAATGGATAGTAGTTTTGTAGTGAAGACTTTAAAACTGCCGCT
GCAAAACTAATGATTATGCGCTTAGTTTGGGTAAATTAAGTGTGTGAATA
CTCCAAAACACGGCCGTTATTAGCTACTTGCCGGTGACGGTCCATGACCT
GCAAGCAGCCATATGATTTGTCCCCGCTAGAAATCTACCGGGTGTACGGG
GTGGGGTTGTAGAAATAGTTCTGTGCACCATCTCTCTTGAGAGATGCAAG
GATGGGCAATAGAAGGAGTAGAAGTAGAGGCACATCCTAACCTTGACTGT
AGCATGGTACCAAGGTTGATTTTACATGTCAGCAGTCTTTATTGGTCATG
ACTCACTCCTACTATCTCCTTCAGAAACCAGACGGCTACAAGGGCAGTGT
TTTCCACCGCGTCATCGGTAACTTCATGATCCAAGGTGGAGACTTCACTC
GTGGGGACGGCACTGGAGGTTGGTATTTATAAACACTTCATGATCCTAGT
TCTAAACAAATACTCCTGTATCCTGTTTAGACTGAAAATGGCAGGCTTGA
ACAAAACCATTTGGTCACACGATATGATGATAATGCATACAGATGTGCAC
ATGCACAGTTTGTACACACACAGTGACACACACATGTCTATGCATGGACA
TGCACGTGCACACACACTAACATGAACACACATAAATACATACACACACA
CACTGACATGCACACACATACACATACACACACACAGGCACACATTTACA
TATACAAAGTGTCTTATTAACCCTTATTACTCCTTAACACATGAATCAAT
ACTTCAATTGATACTGGACTCTTGTAAGGTAAAGAGATGAAGGTTAATGT
ACAAATATTGATAAGCTGGGCTCGTTATGGCTGTGTGTCTGTAACTCAAC
TACACATTCTCCAGTTGGCTTTGTTCTCACTCTCATGCCATACTTTTTGC
CATCATTTTCTGAACATACTTTTTCCACAATATCCTTAACAGATGTCGTA
NTTCCACAATATCCTTAACAGATCGTCGTATTAGACACTGTTTCAAGGAG
TAAGTTACATGTATCGTCTGTTGCAACTAGCTATGGAGCTATCATTGACC
ACTTGCTGATACAGCTCTTATCTTCTTTTCTGTCTCTCTTTGCCACGCAT
ACTACAAAAGGTGTACTCACAGAGGGATTCGAAGGGCCTCCCACCTGGAA
ACAAATAGAACGACTTAAAGCCAGCGAAGAAAAGATTCGCAAAGAAGGAA
GACAAAGGAATCCTATGGCACTAGGAATAGCTGGCACAGGCCGAAAAATC
ATGAACATTAATCCTTTGTTTGTTCTGTTTCACGTGATGTATTCAATAGT
AGAGGCCTTGTGGCCAAGTGAAGGTGAGGACNTGATGTATTCAATAGTAG
AGGCCTTGTGGCCGAGTGAAGGTGAGGACATAACCTTCTCTTGGAGTGTC
CTTCCAACCTCTCTTCAAAGTGCCTTGTGCCCTTCGTGAAATGTTAACGT
TAAGTGGCTGAGAGCCTGCTAACTGACTGCTGTTTTGGTTTTCTGTTGTT
TTTGTGCATGAGATAGTGGCAATGATGGCTTGTGTATGGGCATGTTGGAC
ACAGACACTTTGAAATGTTGTATGGCACAACAGTTTTTCACAAGTTTTGT
TATCATTTCACCAACTAGTGCTGTCATCCCTCTTTAATCCAAATCTCCTG
TCTGCTTCTTTATAATTCCCAATTTCACAGAACAATTGTTACATGAACAA
ATCTCATTGTTTGCCTTGCAGGCAAGAGCATCTATGGTGACCGTTTTGAG
GATGAAAACTTCAAGCTGCACCACTACGGCCAAGGCTGGCTGAGCATGGC
AAATGCCGGCAAGAACACAAACGGTTCCCAGTTCTTCATTACTGTAGCAA
AGACGGAGTGGTTGGACGGCAAGCATGTCGTCTTTGGAAAGGTCCTGAAG
GGCATGGTAAGGCCTGCTTCGATGCAGTACTTTATCTAGCAGTGAATAAG
AGAAAACAATCATGTCTATGATCTAGTGCATCTATTTGTACCAAAGGAGC
TAAAATATAATGTGAATTAGACCGAGTTCATGTAATTATATCCATCAATT
CCCTATAGGGAAAGGAAAATAAATTGTTTTCTCAGGTGTCGTTTTTCCTC
CCATCTCTCATTCTTCAGAGTTCAGACCTCCATGTTACTACTGATATTAC
TAGCATCTAGAATATGTGTAACATATTTACCTCNAACATATTGACCTCTG
GGTTACACTTGGTAAACTTTAAACAAAAAAAGGAATGATGTACTTATGAC
TGGCAAAAGTAGTATGTGAGTTTTGTGACATATGTTGAGAAATATTGATG
GGCCAAGGTGTCATTTTATGTTTTATCCTAAATCCTCTTTGCTTCTTCCA
GAGTGTCGTGAAAAAGATCGAGAAAACTAAGACAGACGGCAGAGACAGGC
CAGAGAAAGAAGTGAAAATTAAGGATGCTGGACACGAGAAATTTGACACA
CCATTCGCTGTTGAGAAAGAGAAAGTAGACGATAACAATTAG Coding sequence (CDS) from alignment at Sc0000061:580581..586472- >transcript:BL95571_evm1 ID=transcript:BL95571_evm1|Name=transcript:BL95571_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3120bp|location=Sequence derived from alignment at Sc0000061:580581..586472- (Branchiostoma lanceolatum)
ATGTTCGCGCTTTCGCGTGATCTCCCCGCAGTGAAGTCCAAACTACCGCA
AAAATTTGTTTTCTATTATTACCTGTCAGACCCCCTTACTGTTTGGTTTG
ACATCACCATCGGAGGCGAGGATGCCGGGCGGATTGAGATCGGACTGTTC
GGCAAGACCGTGCCAAAAACAGTCAAGAACTTCATCCAACTGGCCCAGAA
AACAAAACCAGACGGCTACAAGGGCAGTGTTTTCCACCGCGTCATCGGTA
ACTTCATGATCCAAGGTGGAGACTTCACTCGTGGGGACGGCACTGGAGGC
AAGAGCATCTATGGTGACCGTTTTGAGGATGAAAACTTCAAGCTGCACCA
CTACGGCCAAGGCTGGCTGAGCATGGCAAATGCCGGCAAGAACACAAACG
GTTCCCAGTTCTTCATTACTGTAGCAAAGACGGAGTGGTTGGACGGCAAG
CATGTCGTCTTTGGAAAGGTCCTGAAGGGCATGAGTGTCGTGAAAAAGAT
CGAGAAAACTAAGACAGACGGCAGAGACAGGCCAGAGAAAGAAGTGAAAA
TTAAGGATGCTGGACACGAGAAATTTGACACACCATTCGCTGTTGAGAAA
GAGAAAGTAGACGATAACAATTAGATGTTCGCGCTTTCGCGTGATCTCCC
CGCAGTGAAGTCCAAACTACCGCAAAAATTTGTTTTCTATTATTACCTGT
CAGACCCCCTTACTGTTTGGTTTGACATCACCATCGGAGGCGAGGATGCC
GGGCGGATTGAGATCGGACTGTTCGGCAAGACCGTGCCAAAAACAGTCAA
GAACTTCATCCAACTGGCCCAGAAAACAAAACCAGACGGCTACAAGGGCA
GTGTTTTCCACCGCGTCATCGGTAACTTCATGATCCAAGGTGGAGACTTC
ACTCGTGGGGACGGCACTGGAGGCAAGAGCATCTATGGTGACCGTTTTGA
GGATGAAAACTTCAAGCTGCACCACTACGGCCAAGGCTGGCTGAGCATGG
CAAATGCCGGCAAGAACACAAACGGTTCCCAGTTCTTCATTACTGTAGCA
AAGACGGAGTGGTTGGACGGCAAGCATGTCGTCTTTGGAAAGGTCCTGAA
GGGCATGAGTGTCGTGAAAAAGATCGAGAAAACTAAGACAGACGGCAGAG
ACAGGCCAGAGAAAGAAGTGAAAATTAAGGATGCTGGACACGAGAAATTT
GACACACCATTCGCTGTTGAGAAAGAGAAAGTAGACGATAACAATTAGAT
GTTCGCGCTTTCGCGTGATCTCCCCGCAGTGAAGTCCAAACTACCGCAAA
AATTTGTTTTCTATTATTACCTGTCAGACCCCCTTACTGTTTGGTTTGAC
ATCACCATCGGAGGCGAGGATGCCGGGCGGATTGAGATCGGACTGTTCGG
CAAGACCGTGCCAAAAACAGTCAAGAACTTCATCCAACTGGCCCAGAAAA
CAAAACCAGACGGCTACAAGGGCAGTGTTTTCCACCGCGTCATCGGTAAC
TTCATGATCCAAGGTGGAGACTTCACTCGTGGGGACGGCACTGGAGGCAA
GAGCATCTATGGTGACCGTTTTGAGGATGAAAACTTCAAGCTGCACCACT
ACGGCCAAGGCTGGCTGAGCATGGCAAATGCCGGCAAGAACACAAACGGT
TCCCAGTTCTTCATTACTGTAGCAAAGACGGAGTGGTTGGACGGCAAGCA
TGTCGTCTTTGGAAAGGTCCTGAAGGGCATGAGTGTCGTGAAAAAGATCG
AGAAAACTAAGACAGACGGCAGAGACAGGCCAGAGAAAGAAGTGAAAATT
AAGGATGCTGGACACGAGAAATTTGACACACCATTCGCTGTTGAGAAAGA
GAAAGTAGACGATAACAATTAGATGTTCGCGCTTTCGCGTGATCTCCCCG
CAGTGAAGTCCAAACTACCGCAAAAATTTGTTTTCTATTATTACCTGTCA
GACCCCCTTACTGTTTGGTTTGACATCACCATCGGAGGCGAGGATGCCGG
GCGGATTGAGATCGGACTGTTCGGCAAGACCGTGCCAAAAACAGTCAAGA
ACTTCATCCAACTGGCCCAGAAAACAAAACCAGACGGCTACAAGGGCAGT
GTTTTCCACCGCGTCATCGGTAACTTCATGATCCAAGGTGGAGACTTCAC
TCGTGGGGACGGCACTGGAGGCAAGAGCATCTATGGTGACCGTTTTGAGG
ATGAAAACTTCAAGCTGCACCACTACGGCCAAGGCTGGCTGAGCATGGCA
AATGCCGGCAAGAACACAAACGGTTCCCAGTTCTTCATTACTGTAGCAAA
GACGGAGTGGTTGGACGGCAAGCATGTCGTCTTTGGAAAGGTCCTGAAGG
GCATGAGTGTCGTGAAAAAGATCGAGAAAACTAAGACAGACGGCAGAGAC
AGGCCAGAGAAAGAAGTGAAAATTAAGGATGCTGGACACGAGAAATTTGA
CACACCATTCGCTGTTGAGAAAGAGAAAGTAGACGATAACAATTAGATGT
TCGCGCTTTCGCGTGATCTCCCCGCAGTGAAGTCCAAACTACCGCAAAAA
TTTGTTTTCTATTATTACCTGTCAGACCCCCTTACTGTTTGGTTTGACAT
CACCATCGGAGGCGAGGATGCCGGGCGGATTGAGATCGGACTGTTCGGCA
AGACCGTGCCAAAAACAGTCAAGAACTTCATCCAACTGGCCCAGAAAACA
AAACCAGACGGCTACAAGGGCAGTGTTTTCCACCGCGTCATCGGTAACTT
CATGATCCAAGGTGGAGACTTCACTCGTGGGGACGGCACTGGAGGCAAGA
GCATCTATGGTGACCGTTTTGAGGATGAAAACTTCAAGCTGCACCACTAC
GGCCAAGGCTGGCTGAGCATGGCAAATGCCGGCAAGAACACAAACGGTTC
CCAGTTCTTCATTACTGTAGCAAAGACGGAGTGGTTGGACGGCAAGCATG
TCGTCTTTGGAAAGGTCCTGAAGGGCATGAGTGTCGTGAAAAAGATCGAG
AAAACTAAGACAGACGGCAGAGACAGGCCAGAGAAAGAAGTGAAAATTAA
GGATGCTGGACACGAGAAATTTGACACACCATTCGCTGTTGAGAAAGAGA
AAGTAGACGATAACAATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000061 | genome | Sc0000061:580581..586472 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95571_evm1 |
| Biotype | protein_coding |
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